RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-222	ENST00000514006	LAX1	Q8IWV1	398 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ZNF441	Q8N8Z8	693 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	OR2T12	Q8NG77	320 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CCDC110	Q8TBZ0	833 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	GRHL3	Q8TE85	626 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	GGH	Q92820	318 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	C17orf77	Q96MU5	243 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	NDN	Q99608	321 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	MAP3K3	Q99759	626 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CARD9	Q9H257	536 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	IL25	Q9H293	177 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	TMEM245	Q9H330	911 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	C10orf88	Q9H8K7	445 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	RNF121	Q9H920	327 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	PELI2	Q9HAT8	420 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	MALT1	Q9UDY8	824 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	KCNJ14	Q9UNX9	436 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006		A0A1W2PN81	502 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006		A0A1W2PPI3	338 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	TMEM129	A0AVI4	362 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	SRRM3	A6NNA2	597 aa	Predicted RBP	4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ZNF197	O14709	1029 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	MAGEB2	O15479	319 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	SMPD2	O60906	423 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	NOL3	O60936	208 aa	Known RBP	4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ATP6V1G1	O75348	118 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	FAM200B	P0CF97	657 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	FCGR1A	P12314	374 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ZNF18	P17022	549 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CHRNA7	P36544	502 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CDKN1A	P38936	164 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	TKTL1	P51854	596 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	FUT6	P51993	359 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	HNRNPF	P52597	415 aa	Known RBP	4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CDH11	P55287	796 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ZBTB17	Q13105	803 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	SNTA1	Q13424	505 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	KIR2DS3	Q14952	304 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ZNF260	Q3ZCT1	412 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	OR6B2	Q6IFH4	312 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	PSRC1	Q6PGN9	363 aa	Predicted RBP	4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	OLFM4	Q6UX06	510 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ADAMTSL2	Q86TH1	951 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	PLD3	Q8IV08	490 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	EID3	Q8N140	333 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	FBXL14	Q8N1E6	418 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	THEM5	Q8N1Q8	247 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	TMEM185A	Q8NFB2	350 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ZNF473	Q8WTR7	871 aa	Known RBP	4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	PHLDA1	Q8WV24	401 aa	Predicted RBP	4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	HSD17B8	Q92506	261 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	SYAP1	Q96A49	352 aa	Predicted RBP	4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	RFT1	Q96AA3	541 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	HMCES	Q96FZ2	354 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	BICD1	Q96G01	975 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	SAMD8	Q96LT4	415 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CCDC3	Q9BQI4	270 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	NACAP1	Q9BZK3	213 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	RWDD1	Q9H446	243 aa	Predicted RBP	4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	GAREM1	Q9H706	876 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	GPN1	Q9HCN4	374 aa	Predicted RBP	4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	KCNMB3	Q9NPA1	279 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CHST11	Q9NPF2	352 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	PPAN	Q9NQ55	473 aa	Known RBP	4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	POLE3	Q9NRF9	147 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	FGF21	Q9NSA1	209 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	FAM207A	Q9NSI2	230 aa	Predicted RBP	4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	DONSON	Q9NYP3	566 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	IL16	Q14005	1332 aa		4.61	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ARID2	Q68CP9	1835 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CLEC18A	A5D8T8	446 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ASPDH	A6ND91	283 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006		O00370	1275 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	SSX5	O60225	188 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ACSL4	O60488	711 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CTSV	O60911	334 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	PRKRA	O75569	313 aa	Known RBP	4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	PIGN	O95427	931 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	BAG3	O95817	575 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	IFNB1	P01574	187 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	APOH	P02749	345 aa	Predicted RBP	4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	DAO	P14920	347 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	GOT1	P17174	413 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	NR1D1	P20393	614 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	DGKA	P23743	735 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ACP1	P24666	158 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CSTF2	P33240	577 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CETN2	P41208	172 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	NR4A2	P43354	598 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	HUNK	P57058	714 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	FKBP1B	P68106	108 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	SLC3A1	Q07837	685 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	SIRPB2	Q5JXA9	342 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	SLC35D3	Q5M8T2	416 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ZNF425	Q6IV72	752 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	UNC5D	Q6UXZ4	953 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	WDR88	Q6ZMY6	472 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CREB3L2	Q70SY1	520 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	TAF8	Q7Z7C8	310 aa		4.6	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	PRSS35	Q8N3Z0	413 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms