RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 UBXN10Q96LJ8 280 aa13.33□□□□□ -0.28
DDX41-212ENST00000511040 ALG9Q9H6U8 611 aa13.33□□□□□ -0.28
DDX41-212ENST00000511040 SNX15Q9NRS6 342 aa13.33□□□□□ -0.28
DDX41-212ENST00000511040 IGSF5Q9NSI5 407 aa13.33□□□□□ -0.28
DDX41-212ENST00000511040 POLHQ9Y253 713 aa13.33□□□□□ -0.28
DDX41-212ENST00000511040 SLC22A14Q9Y267 594 aa13.33□□□□□ -0.28
DDX41-212ENST00000511040 MAN2B2Q9Y2E5 1009 aa13.33□□□□□ -0.28
DDX41-212ENST00000511040 PADI2Q9Y2J8 665 aa13.33□□□□□ -0.28
DDX41-212ENST00000511040 FFAR3O14843 346 aa13.32□□□□□ -0.28
DDX41-212ENST00000511040 GPR42O15529 346 aa13.32□□□□□ -0.28
DDX41-212ENST00000511040 LCMT2O60294 686 aaKnown RBP13.32□□□□□ -0.28
DDX41-212ENST00000511040 KLF7O75840 302 aaPredicted RBP13.32□□□□□ -0.28
DDX41-212ENST00000511040 WDR47O94967 919 aa13.32□□□□□ -0.28
DDX41-212ENST00000511040 KCNC1P48547 511 aa13.32□□□□□ -0.28
DDX41-212ENST00000511040 CCR8P51685 355 aa13.32□□□□□ -0.28
DDX41-212ENST00000511040 SNRPNP63162 240 aaKnown RBP13.32□□□□□ -0.28
DDX41-212ENST00000511040 CDKL1Q00532 357 aa13.32□□□□□ -0.28
DDX41-212ENST00000511040 CHAF1BQ13112 559 aa13.32□□□□□ -0.28
DDX41-212ENST00000511040 TGFBIQ15582 683 aa13.32□□□□□ -0.28
DDX41-212ENST00000511040 CPZQ66K79 652 aa13.32□□□□□ -0.28
DDX41-212ENST00000511040 SHISA6Q6ZSJ9 500 aa13.32□□□□□ -0.28
DDX41-212ENST00000511040 VN1R4Q7Z5H5 301 aa13.32□□□□□ -0.28
DDX41-212ENST00000511040 TBC1D1Q86TI0 1168 aaPredicted RBP13.32□□□□□ -0.28
DDX41-212ENST00000511040 KCTD4Q8WVF5 259 aa13.32□□□□□ -0.28
DDX41-212ENST00000511040 APOBEC4Q8WW27 367 aaKnown RBP13.32□□□□□ -0.28
DDX41-212ENST00000511040 SLC44A1Q8WWI5 657 aa13.32□□□□□ -0.28
DDX41-212ENST00000511040 SLC5A11Q8WWX8 675 aa13.32□□□□□ -0.28
DDX41-212ENST00000511040 NEIL2Q969S2 332 aa13.32□□□□□ -0.28
DDX41-212ENST00000511040 COL26A1Q96A83 441 aa13.32□□□□□ -0.28
DDX41-212ENST00000511040 ESAMQ96AP7 390 aa13.32□□□□□ -0.28
DDX41-212ENST00000511040 RHBDF1Q96CC6 855 aa13.32□□□□□ -0.28
DDX41-212ENST00000511040 NXNL1Q96CM4 212 aa13.32□□□□□ -0.28
DDX41-212ENST00000511040 C17orf62Q9BQA9 187 aa13.32□□□□□ -0.28
DDX41-212ENST00000511040 FUT8Q9BYC5 575 aa13.32□□□□□ -0.28
DDX41-212ENST00000511040 ENAMQ9NRM1 1142 aa13.32□□□□□ -0.28
DDX41-212ENST00000511040 WWOXQ9NZC7 414 aa13.32□□□□□ -0.28
DDX41-212ENST00000511040 CD274Q9NZQ7 290 aa13.32□□□□□ -0.28
DDX41-212ENST00000511040 CTSFQ9UBX1 484 aa13.32□□□□□ -0.28
DDX41-212ENST00000511040 RNF112Q9ULX5 631 aa13.32□□□□□ -0.28
DDX41-212ENST00000511040 MRPS2Q9Y399 296 aaKnown RBP13.32□□□□□ -0.28
DDX41-212ENST00000511040 DYRK1BQ9Y463 629 aa13.32□□□□□ -0.28
DDX41-212ENST00000511040 KCNMB2Q9Y691 235 aa13.32□□□□□ -0.28
DDX41-212ENST00000511040 A0A087WUV0 522 aaPredicted RBP13.31□□□□□ -0.28
DDX41-212ENST00000511040 ARGFXA6NJG6 315 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 TAPBPO15533 448 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 OR1F1O43749 312 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 DNAJB5O75953 348 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 C1QL1O75973 258 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 C2P06681 752 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 INHBAP08476 426 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 LTA4HP09960 611 aaKnown RBP13.31□□□□□ -0.28
DDX41-212ENST00000511040 TFEBP19484 476 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 FOLR3P41439 243 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 MSH2P43246 934 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 SERPINB8P50452 374 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 PMS2P54278 862 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 RPS15AP62244 130 aaKnown RBP13.31□□□□□ -0.28
DDX41-212ENST00000511040 RELAQ04206 551 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 MUM1Q2TAK8 710 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 MRPL14Q6P1L8 145 aaKnown RBP13.31□□□□□ -0.28
DDX41-212ENST00000511040 OVCH1Q7RTY7 1134 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 TMPRSS11BQ86T26 416 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 ISCA2Q86U28 154 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 PRSS58Q8IYP2 241 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 MFSD9Q8NBP5 474 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 LSM14AQ8ND56 463 aaKnown RBP13.31□□□□□ -0.28
DDX41-212ENST00000511040 ZNF740Q8NDX6 193 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 ABHD11Q8NFV4 315 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 ADAMTS17Q8TE56 1095 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 KIAA1191Q96A73 305 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 PAFAH2Q99487 392 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 TMEM79Q9BSE2 394 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 DHRS4Q9BTZ2 278 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 VPS11Q9H270 941 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 SPNS1Q9H2V7 528 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 SOX17Q9H6I2 414 aaPredicted RBP13.31□□□□□ -0.28
DDX41-212ENST00000511040 NMRAL1Q9HBL8 299 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 ZNF304Q9HCX3 659 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 TLK1Q9UKI8 766 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 ACOT9Q9Y305 439 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 IKBKGQ9Y6K9 419 aa13.31□□□□□ -0.28
DDX41-212ENST00000511040 PCSK5Q92824 1860 aa13.3□□□□□ -0.28
DDX41-212ENST00000511040 A0A087X1B8 175 aa13.3□□□□□ -0.28
DDX41-212ENST00000511040 A0A096LPK6 155 aa13.3□□□□□ -0.28
DDX41-212ENST00000511040 A0A0A6YYC8 382 aaPredicted RBP13.3□□□□□ -0.28
DDX41-212ENST00000511040 SUPT3HB4E1H0 165 aa13.3□□□□□ -0.28
DDX41-212ENST00000511040 I3L1I5 382 aaPredicted RBP13.3□□□□□ -0.28
DDX41-212ENST00000511040 UBXN8O00124 270 aa13.3□□□□□ -0.28
DDX41-212ENST00000511040 TK2O00142 265 aa13.3□□□□□ -0.28
DDX41-212ENST00000511040 SUPT3HO75486 399 aa13.3□□□□□ -0.28
DDX41-212ENST00000511040 RECKO95980 971 aa13.3□□□□□ -0.28
DDX41-212ENST00000511040 ALDOAP04075 364 aaKnown RBP13.3□□□□□ -0.28
DDX41-212ENST00000511040 S100BP04271 92 aaPredicted RBP13.3□□□□□ -0.28
DDX41-212ENST00000511040 SERPIND1P05546 499 aa13.3□□□□□ -0.28
DDX41-212ENST00000511040 UMODP07911 640 aa13.3□□□□□ -0.28
DDX41-212ENST00000511040 MYBL2P10244 700 aa13.3□□□□□ -0.28
DDX41-212ENST00000511040 PIM1P11309 404 aaPredicted RBP13.3□□□□□ -0.28
DDX41-212ENST00000511040 FBLP22087 321 aaKnown RBP13.3□□□□□ -0.28
DDX41-212ENST00000511040 VARSP26640 1264 aaKnown RBP13.3□□□□□ -0.28
DDX41-212ENST00000511040 TYK2P29597 1187 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms