RNA–Protein interactions for RNA: ENST00000509354.1

TRIO-213, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 801 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-213ENST00000509354 SOWAHCQ53LP3 525 aaPredicted RBP7.04□□□□□ -1.28
TRIO-213ENST00000509354 ZRANB3Q5FWF4 1079 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 ZNF678Q5SXM1 525 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 UGT3A1Q6NUS8 523 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 KLC3Q6P597 504 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 TTC23LQ6PF05 361 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 EPGNQ6UW88 154 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 SBSNQ6UWP8 590 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 ZCCHC23Q6ZST2 131 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 TMEM26Q6ZUK4 368 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 FRMD7Q6ZUT3 714 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 NEK10Q6ZWH5 1172 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 CHSY3Q70JA7 882 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 CLNKQ7Z7G1 428 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 SLC9B2Q86UD5 537 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 AMZ2Q86W34 360 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 GALNT12Q8IXK2 581 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 PDPRQ8NCN5 879 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 OR10G6Q8NH81 332 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 STAG3L4Q8TBR4 150 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 INPP5DQ92835 1189 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.04□□□□□ -1.286e-7■■■■■ 62.8
TRIO-213ENST00000509354 SGF29Q96ES7 293 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 AHCYL2Q96HN2 611 aaKnown RBP7.04□□□□□ -1.28
TRIO-213ENST00000509354 TSNARE1Q96NA8 513 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 FRMD6Q96NE9 622 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 TMEM237Q96Q45 408 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 TTC1Q99614 292 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 GPR21Q99679 349 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 CMKLR1Q99788 373 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 CTRCQ99895 268 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 TMEM120AQ9BXJ8 343 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 ERVK-6Q9BXR3 956 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 WWP1Q9H0M0 922 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 ZNF385DQ9H6B1 395 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 APMAPQ9HDC9 416 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 CPSF2Q9P2I0 782 aaKnown RBP7.04□□□□□ -1.28
TRIO-213ENST00000509354 VTI1BQ9UEU0 232 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 LNPEPQ9UIQ6 1025 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 CRLS1Q9UJA2 301 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 GNPTGQ9UJJ9 305 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 IKZF3Q9UKT9 509 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 PCDHGA7Q9Y5G6 932 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 PRSS21Q9Y6M0 314 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 ZNF462Q96JM2 2506 aa7.04□□□□□ -1.28
TRIO-213ENST00000509354 SPTA1P02549 2419 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 EFCAB7A8K855 629 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 QSOX1O00391 747 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 EREGO14944 169 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 HGSO14964 777 aaPredicted RBP7.03□□□□□ -1.28
TRIO-213ENST00000509354 SLC22A2O15244 555 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 NVLO15381 856 aaKnown RBP7.03□□□□□ -1.28
TRIO-213ENST00000509354 KIF1CO43896 1103 aaKnown RBP7.03□□□□□ -1.28
TRIO-213ENST00000509354 HNRNPCL1O60812 293 aaKnown RBP7.03□□□□□ -1.28
TRIO-213ENST00000509354 GPC4O75487 556 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 LYPLA1O75608 230 aaPredicted RBP7.03□□□□□ -1.28
TRIO-213ENST00000509354 ATP5HO75947 161 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 UBXN7O94888 489 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 UBOX5O94941 541 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 UNC5CO95185 931 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 PRB1P04280 392 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 SERPINA6P08185 405 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 TPBGLP0DKB5 382 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 ENO3P13929 434 aaPredicted RBP7.03□□□□□ -1.28
TRIO-213ENST00000509354 XRCC1P18887 633 aaPredicted RBP7.03□□□□□ -1.28
TRIO-213ENST00000509354 IDSP22304 550 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 ADSLP30566 484 aaPredicted RBP7.03□□□□□ -1.28
TRIO-213ENST00000509354 CSTF2P33240 577 aaKnown RBP eCLIP7.03□□□□□ -1.28
TRIO-213ENST00000509354 GLRBP48167 497 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 MRPL19P49406 292 aaKnown RBP7.03□□□□□ -1.28
TRIO-213ENST00000509354 NAGLUP54802 743 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 IL2P60568 153 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 CDKL1Q00532 357 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 PCDH1Q08174 1060 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 DMPKQ09013 629 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 SQSTM1Q13501 440 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 TRA2AQ13595 282 aaKnown RBP eCLIP7.03□□□□□ -1.28
TRIO-213ENST00000509354 PCBP2Q15366 365 aaKnown RBP eCLIP7.03□□□□□ -1.281e-6■■□□□ 11.4
TRIO-213ENST00000509354 RPE65Q16518 533 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 CLPPQ16740 277 aaPredicted RBP7.03□□□□□ -1.28
TRIO-213ENST00000509354 UGT3A2Q3SY77 523 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 BCL7AQ4VC05 210 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 UNC50Q53HI1 259 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 ARL13AQ5H913 290 aaPredicted RBP7.03□□□□□ -1.28
TRIO-213ENST00000509354 BROXQ5VW32 411 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 KIAA1614Q5VZ46 1190 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 ANKS6Q68DC2 871 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 TMEM71Q6P5X7 295 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 PCSK4Q6UW60 755 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 ABRAXAS1Q6UWZ7 409 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 WDR75Q8IWA0 830 aaKnown RBP7.03□□□□□ -1.28
TRIO-213ENST00000509354 KLHDC8AQ8IYD2 350 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 SPATA6LQ8N4H0 392 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 ZNF781Q8N8C0 355 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 BMPERQ8N8U9 685 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 AGBL5Q8NDL9 886 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 LKAAEAR1Q8TD35 194 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 UBTD2Q8WUN7 234 aa7.03□□□□□ -1.28
TRIO-213ENST00000509354 SREK1Q8WXA9 508 aaKnown RBP7.03□□□□□ -1.28
TRIO-213ENST00000509354 CXorf40BQ96DE9 158 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms