RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 LIPGQ9Y5X9 500 aa11.73□□□□□ -0.53
LSM6-204ENST00000504181 IGLV3-16A0A075B6K0 115 aa11.72□□□□□ -0.53
LSM6-204ENST00000504181 FAM166BA8MTA8 275 aa11.72□□□□□ -0.53
LSM6-204ENST00000504181 H0YGG7 62 aa11.72□□□□□ -0.53
LSM6-204ENST00000504181 CES2O00748 559 aa11.72□□□□□ -0.53
LSM6-204ENST00000504181 PRSS56P0CW18 603 aa11.72□□□□□ -0.53
LSM6-204ENST00000504181 FERP16591 822 aa11.72□□□□□ -0.53
LSM6-204ENST00000504181 NFKB1P19838 968 aa11.72□□□□□ -0.53
LSM6-204ENST00000504181 ITGALP20701 1170 aa11.72□□□□□ -0.53
LSM6-204ENST00000504181 CDK11BP21127 795 aaKnown RBP11.72□□□□□ -0.53
LSM6-204ENST00000504181 CSE1LP55060 971 aaKnown RBP11.72□□□□□ -0.53
LSM6-204ENST00000504181 ARF3P61204 181 aaPredicted RBP11.72□□□□□ -0.53
LSM6-204ENST00000504181 SYTL3Q4VX76 610 aa11.72□□□□□ -0.53
LSM6-204ENST00000504181 SFT2D3Q587I9 215 aa11.72□□□□□ -0.53
LSM6-204ENST00000504181 RIPPLY2Q5TAB7 128 aa11.72□□□□□ -0.53
LSM6-204ENST00000504181 ERICH6BQ5W0A0 696 aa11.72□□□□□ -0.53
LSM6-204ENST00000504181 HEPHL1Q6MZM0 1159 aa11.72□□□□□ -0.53
LSM6-204ENST00000504181 LRRC8BQ6P9F7 803 aa11.72□□□□□ -0.53
LSM6-204ENST00000504181 SNX20Q7Z614 316 aa11.72□□□□□ -0.53
LSM6-204ENST00000504181 HIPK1Q86Z02 1210 aa11.72□□□□□ -0.53
LSM6-204ENST00000504181 NIPA2Q8N8Q9 360 aa11.72□□□□□ -0.53
LSM6-204ENST00000504181 IPMKQ8NFU5 416 aa11.72□□□□□ -0.53
LSM6-204ENST00000504181 OR2L8Q8NGY9 312 aa11.72□□□□□ -0.53
LSM6-204ENST00000504181 KIAA1191Q96A73 305 aa11.72□□□□□ -0.53
LSM6-204ENST00000504181 C19orf24Q9BVV8 132 aa11.72□□□□□ -0.53
LSM6-204ENST00000504181 DRC3Q9H069 523 aa11.72□□□□□ -0.53
LSM6-204ENST00000504181 TRIM45Q9H8W5 580 aaPredicted RBP11.72□□□□□ -0.53
LSM6-204ENST00000504181 ALKBH4Q9NXW9 302 aa11.72□□□□□ -0.53
LSM6-204ENST00000504181 SOWAHDA6NJG2 315 aa11.71□□□□□ -0.53
LSM6-204ENST00000504181 C2orf81A6NN90 581 aa11.71□□□□□ -0.53
LSM6-204ENST00000504181 CCL22O00626 93 aa11.71□□□□□ -0.53
LSM6-204ENST00000504181 WDR1O75083 606 aa11.71□□□□□ -0.53
LSM6-204ENST00000504181 GOSR1O95249 250 aa11.71□□□□□ -0.53
LSM6-204ENST00000504181 STATHP02808 62 aa11.71□□□□□ -0.53
LSM6-204ENST00000504181 GSTM1P09488 218 aa11.71□□□□□ -0.53
LSM6-204ENST00000504181 PTPN3P26045 913 aa11.71□□□□□ -0.53
LSM6-204ENST00000504181 EEF1GP26641 437 aaKnown RBP11.71□□□□□ -0.53
LSM6-204ENST00000504181 CD68P34810 354 aaPredicted RBP11.71□□□□□ -0.53
LSM6-204ENST00000504181 AGTR2P50052 363 aa11.71□□□□□ -0.53
LSM6-204ENST00000504181 HLCSP50747 726 aa11.71□□□□□ -0.53
LSM6-204ENST00000504181 EMP3P54852 163 aa11.71□□□□□ -0.53
LSM6-204ENST00000504181 PPIAP62937 165 aaKnown RBP11.71□□□□□ -0.53
LSM6-204ENST00000504181 PLGLB1Q02325 96 aa11.71□□□□□ -0.53
LSM6-204ENST00000504181 GSTM4Q03013 218 aa11.71□□□□□ -0.53
LSM6-204ENST00000504181 ACTN3Q08043 901 aaPredicted RBP11.71□□□□□ -0.53
LSM6-204ENST00000504181 HADHQ16836 314 aaKnown RBP11.71□□□□□ -0.53
LSM6-204ENST00000504181 TEX44Q53QW1 395 aa11.71□□□□□ -0.53
LSM6-204ENST00000504181 FKBP15Q5T1M5 1219 aa11.71□□□□□ -0.53
LSM6-204ENST00000504181 KIAA0930Q6ICG6 404 aaPredicted RBP11.71□□□□□ -0.53
LSM6-204ENST00000504181 NPNTQ6UXI9 565 aa11.71□□□□□ -0.53
LSM6-204ENST00000504181 SERPINA9Q86WD7 417 aa11.71□□□□□ -0.53
LSM6-204ENST00000504181 CPNE8Q86YQ8 564 aa11.71□□□□□ -0.53
LSM6-204ENST00000504181 PLD5Q8N7P1 536 aa11.71□□□□□ -0.53
LSM6-204ENST00000504181 MLKLQ8NB16 471 aa11.71□□□□□ -0.53
LSM6-204ENST00000504181 MAPK1IP1LQ8NDC0 245 aa11.71□□□□□ -0.53
LSM6-204ENST00000504181 FAF2Q96CS3 445 aa11.71□□□□□ -0.53
LSM6-204ENST00000504181 SPATA13Q96N96 652 aa11.71□□□□□ -0.53
LSM6-204ENST00000504181 CNPPD1Q9BV87 410 aa11.71□□□□□ -0.53
LSM6-204ENST00000504181 SYNPO2LQ9H987 977 aa11.71□□□□□ -0.53
LSM6-204ENST00000504181 VPS9D1Q9Y2B5 631 aa11.71□□□□□ -0.53
LSM6-204ENST00000504181 SLC5A10A0PJK1 596 aa11.7□□□□□ -0.54
LSM6-204ENST00000504181 OR14I1A6ND48 311 aa11.7□□□□□ -0.54
LSM6-204ENST00000504181 ARHGEF33A8MVX0 844 aa11.7□□□□□ -0.54
LSM6-204ENST00000504181 FAM47E-STBD1D6RA91 191 aa11.7□□□□□ -0.54
LSM6-204ENST00000504181 CDK2AP1O14519 115 aa11.7□□□□□ -0.54
LSM6-204ENST00000504181 DVL2O14641 736 aa11.7□□□□□ -0.54
LSM6-204ENST00000504181 SPRY1O43609 319 aaPredicted RBP11.7□□□□□ -0.54
LSM6-204ENST00000504181 FKBP9O95302 570 aa11.7□□□□□ -0.54
LSM6-204ENST00000504181 EPOP01588 193 aa11.7□□□□□ -0.54
LSM6-204ENST00000504181 ACRV1P26436 265 aa11.7□□□□□ -0.54
LSM6-204ENST00000504181 MLF1P58340 268 aa11.7□□□□□ -0.54
LSM6-204ENST00000504181 SLC26A5P58743 744 aa11.7□□□□□ -0.54
LSM6-204ENST00000504181 GRB7Q14451 532 aa11.7□□□□□ -0.54
LSM6-204ENST00000504181 USP10Q14694 798 aaKnown RBP11.7□□□□□ -0.54
LSM6-204ENST00000504181 PDK2Q15119 407 aa11.7□□□□□ -0.54
LSM6-204ENST00000504181 TAF1AQ15573 450 aaPredicted RBP11.7□□□□□ -0.54
LSM6-204ENST00000504181 FBXL19-AS1Q494R0 122 aa11.7□□□□□ -0.54
LSM6-204ENST00000504181 MDGA2Q7Z553 956 aa11.7□□□□□ -0.54
LSM6-204ENST00000504181 IRF2BP2Q7Z5L9 587 aa11.7□□□□□ -0.54
LSM6-204ENST00000504181 KIF18BQ86Y91 864 aa11.7□□□□□ -0.54
LSM6-204ENST00000504181 CYP4Z2PQ8N1L4 340 aa11.7□□□□□ -0.54
LSM6-204ENST00000504181 CSNK1A1LQ8N752 337 aa11.7□□□□□ -0.54
LSM6-204ENST00000504181 CFAP61Q8NHU2 1237 aa11.7□□□□□ -0.54
LSM6-204ENST00000504181 OXNAD1Q96HP4 312 aaPredicted RBP11.7□□□□□ -0.54
LSM6-204ENST00000504181 TEKT5Q96M29 485 aa11.7□□□□□ -0.54
LSM6-204ENST00000504181 LPAR4Q99677 370 aa11.7□□□□□ -0.54
LSM6-204ENST00000504181 CCL19Q99731 98 aa11.7□□□□□ -0.54
LSM6-204ENST00000504181 MTRF1LQ9UGC7 380 aaKnown RBP11.7□□□□□ -0.54
LSM6-204ENST00000504181 IP6K2Q9UHH9 426 aa11.7□□□□□ -0.54
LSM6-204ENST00000504181 FOXD3Q9UJU5 478 aaPredicted RBP11.7□□□□□ -0.54
LSM6-204ENST00000504181 ANAPC7Q9UJX3 599 aa11.7□□□□□ -0.54
LSM6-204ENST00000504181 ACAD8Q9UKU7 415 aa11.7□□□□□ -0.54
LSM6-204ENST00000504181 SLC39A10Q9ULF5 831 aa11.7□□□□□ -0.54
LSM6-204ENST00000504181 PRSS21Q9Y6M0 314 aa11.7□□□□□ -0.54
LSM6-204ENST00000504181 YLPM1P49750 1951 aaKnown RBP11.7□□□□□ -0.54
LSM6-204ENST00000504181 A0A0U1RQJ8 604 aa11.69□□□□□ -0.54
LSM6-204ENST00000504181 PINLYPA6NC86 204 aa11.69□□□□□ -0.54
LSM6-204ENST00000504181 HSPB2A8KAH6 182 aa11.69□□□□□ -0.54
LSM6-204ENST00000504181 PPP1R12AO14974 1030 aaPredicted RBP11.69□□□□□ -0.54
LSM6-204ENST00000504181 CYC1P08574 325 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms