RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 TBPL1P62380 186 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 TAP2Q03519 686 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 ACSM2AQ08AH3 577 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 BNIP2Q12982 314 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 SLC14A1Q13336 389 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 E2F2Q14209 437 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 FLOT2Q14254 428 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 UAP1L1Q3KQV9 507 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 VPS26BQ4G0F5 336 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 AASDHQ4L235 1098 aaPredicted RBP9.9□□□□□ -0.82
HDAC3-214ENST00000495485 RFTN2Q52LD8 501 aaPredicted RBP9.9□□□□□ -0.82
HDAC3-214ENST00000495485 TRIM61Q5EBN2 209 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 PIGGQ5H8A4 983 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 TCHHL1Q5QJ38 904 aaPredicted RBP9.9□□□□□ -0.82
HDAC3-214ENST00000495485 ACSM2BQ68CK6 577 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 NXPE4Q6UWF7 544 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 ENPP7Q6UWV6 458 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 WASH2PQ6VEQ5 465 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 MSANTD1Q6ZTZ1 278 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 ABI3BPQ7Z7G0 1075 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 FUNDC1Q8IVP5 155 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 LIX1Q8N485 282 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 LILRA3Q8N6C8 439 aaPredicted RBP9.9□□□□□ -0.82
HDAC3-214ENST00000495485 FRMD1Q8N878 549 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 VPS37AQ8NEZ2 397 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 TNIP2Q8NFZ5 429 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 TTLQ8NG68 377 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 FBXO27Q8NI29 283 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 PROKR1Q8TCW9 393 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 SLC5A11Q8WWX8 675 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 WDR34Q96EX3 536 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 LRGUKQ96M69 825 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 AIF1LQ9BQI0 150 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 ORAI3Q9BRQ5 295 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 CENPKQ9BS16 269 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 EFHD1Q9BUP0 239 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 CARS2Q9HA77 564 aaKnown RBP9.9□□□□□ -0.82
HDAC3-214ENST00000495485 TM9SF3Q9HD45 589 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 WASH6PQ9NQA3 447 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 STX18Q9P2W9 335 aaKnown RBP9.9□□□□□ -0.82
HDAC3-214ENST00000495485 GULP1Q9UBP9 304 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 SUCOQ9UBS9 1254 aaKnown RBP9.9□□□□□ -0.82
HDAC3-214ENST00000495485 PPT2Q9UMR5 302 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 SUFUQ9UMX1 484 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 POMPQ9Y244 141 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 CCL27Q9Y4X3 112 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 PCDHGB2Q9Y5G2 931 aa9.9□□□□□ -0.82
HDAC3-214ENST00000495485 ANKDD1BA6NHY2 528 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 FBP2O00757 339 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 ARHGAP33O14559 1287 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 ENTPD5O75356 428 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 TNFP01375 233 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 AMD1P17707 334 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 EPORP19235 508 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 PRPS1L1P21108 318 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 PTX3P26022 381 aaPredicted RBP9.89□□□□□ -0.83
HDAC3-214ENST00000495485 VARSP26640 1264 aaKnown RBP9.89□□□□□ -0.83
HDAC3-214ENST00000495485 GSTM2P28161 218 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 GRK3P35626 688 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 ARRB1P49407 418 aaPredicted RBP9.89□□□□□ -0.83
HDAC3-214ENST00000495485 NME5P56597 212 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 CLDN8P56748 225 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 UFM1P61960 85 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 PPP2CBP62714 309 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 PPP2CAP67775 309 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 HMGCS1Q01581 520 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 SRSF11Q05519 484 aaKnown RBP9.89□□□□□ -0.83
HDAC3-214ENST00000495485 SLC34A1Q06495 639 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 TRIM25Q14258 630 aaKnown RBP9.89□□□□□ -0.83
HDAC3-214ENST00000495485 SUZ12Q15022 739 aaKnown RBP9.89□□□□□ -0.83
HDAC3-214ENST00000495485 MAPKAPK3Q16644 382 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 ZNF423Q2M1K9 1284 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 INAVAQ3KP66 663 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 SLCO4C1Q6ZQN7 724 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 PRR23CQ6ZRP0 262 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 FAM83HQ6ZRV2 1179 aaPredicted RBP9.89□□□□□ -0.83
HDAC3-214ENST00000495485 ASCL5Q7RTU5 278 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 TMPRSS11BQ86T26 416 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 HPS6Q86YV9 775 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 LAS2Q8IYD9 372 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 SDR16C5Q8N3Y7 309 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 DPP10Q8N608 796 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 OR5AR1Q8NGP9 310 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 OR9I1Q8NGQ6 314 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 WDR20Q8TBZ3 569 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 SLC26A7Q8TE54 656 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 ZFPM2Q8WW38 1151 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 SLC22A18Q96BI1 424 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 LRRC58Q96CX6 371 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 ASB9Q96DX5 294 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 KLHDC7BQ96G42 594 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 CLPTM1LQ96KA5 538 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 ACPTQ9BZG2 426 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 MIR1-1HGQ9H1L0 117 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 NT5DC2Q9H857 520 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 AASDHPPTQ9NRN7 309 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 FARSBQ9NSD9 589 aaKnown RBP9.89□□□□□ -0.83
HDAC3-214ENST00000495485 SLC23A2Q9UGH3 650 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 PSMD13Q9UNM6 376 aa9.89□□□□□ -0.83
HDAC3-214ENST00000495485 PRKAB1Q9Y478 270 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms