RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 FAM237BA0A1B0GVD1 139 aa20.94■□□□□ 0.94
HDDC3-203ENST00000494993 CTAGE9A4FU28 777 aa20.94■□□□□ 0.94
HDDC3-203ENST00000494993 SYF2O95926 243 aaKnown RBP20.94■□□□□ 0.94
HDDC3-203ENST00000494993 F7P08709 466 aaPredicted RBP20.94■□□□□ 0.94
HDDC3-203ENST00000494993 MPC1LP0DKB6 136 aa20.94■□□□□ 0.94
HDDC3-203ENST00000494993 GPS1Q13098 491 aa20.94■□□□□ 0.94
HDDC3-203ENST00000494993 FAM53BQ14153 422 aa20.94■□□□□ 0.94
HDDC3-203ENST00000494993 ANKRD22Q5VYY1 191 aa20.94■□□□□ 0.94
HDDC3-203ENST00000494993 ZNF662Q6ZS27 426 aa20.94■□□□□ 0.94
HDDC3-203ENST00000494993 PLD3Q8IV08 490 aa20.94■□□□□ 0.94
HDDC3-203ENST00000494993 LRRC56Q8IYG6 542 aaPredicted RBP20.94■□□□□ 0.94
HDDC3-203ENST00000494993 ASB11Q8WXH4 323 aa20.94■□□□□ 0.94
HDDC3-203ENST00000494993 FBXO6Q9NRD1 293 aaPredicted RBP20.94■□□□□ 0.94
HDDC3-203ENST00000494993 MKL2Q9ULH7 1088 aa20.94■□□□□ 0.94
HDDC3-203ENST00000494993 MED16Q9Y2X0 877 aa20.94■□□□□ 0.94
HDDC3-203ENST00000494993 F10P00742 488 aa20.93■□□□□ 0.94
HDDC3-203ENST00000494993 ITGAMP11215 1152 aa20.93■□□□□ 0.94
HDDC3-203ENST00000494993 ENO3P13929 434 aaPredicted RBP20.93■□□□□ 0.94
HDDC3-203ENST00000494993 EFNA3P52797 238 aa20.93■□□□□ 0.94
HDDC3-203ENST00000494993 KCNK10P57789 538 aa20.93■□□□□ 0.94
HDDC3-203ENST00000494993 AP2B1P63010 937 aa20.93■□□□□ 0.94
HDDC3-203ENST00000494993 MAT1AQ00266 395 aaKnown RBP20.93■□□□□ 0.94
HDDC3-203ENST00000494993 CTBP1Q13363 440 aa20.93■□□□□ 0.94
HDDC3-203ENST00000494993 THOC5Q13769 683 aaKnown RBP20.93■□□□□ 0.94
HDDC3-203ENST00000494993 NDUFA9Q16795 377 aa20.93■□□□□ 0.94
HDDC3-203ENST00000494993 THEMIS2Q5TEJ8 643 aa20.93■□□□□ 0.94
HDDC3-203ENST00000494993 ZNF549Q6P9A3 640 aa20.93■□□□□ 0.94
HDDC3-203ENST00000494993 SPNS2Q8IVW8 549 aa20.93■□□□□ 0.94
HDDC3-203ENST00000494993 DENND6AQ8IWF6 608 aa20.93■□□□□ 0.94
HDDC3-203ENST00000494993 KCNJ9Q92806 393 aa20.93■□□□□ 0.94
HDDC3-203ENST00000494993 EBNA1BP2Q99848 306 aaKnown RBP20.93■□□□□ 0.94
HDDC3-203ENST00000494993 RNF32Q9H0A6 362 aa20.93■□□□□ 0.94
HDDC3-203ENST00000494993 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.93■□□□□ 0.94
HDDC3-203ENST00000494993 CCDC68Q9H2F9 335 aa20.93■□□□□ 0.94
HDDC3-203ENST00000494993 PCNX1Q96RV3 2341 aa20.92■□□□□ 0.94
HDDC3-203ENST00000494993 GFYI3L273 518 aa20.92■□□□□ 0.94
HDDC3-203ENST00000494993 WDPCPO95876 746 aa20.92■□□□□ 0.94
HDDC3-203ENST00000494993 MLNP12872 115 aa20.92■□□□□ 0.94
HDDC3-203ENST00000494993 ICAM2P13598 275 aa20.92■□□□□ 0.94
HDDC3-203ENST00000494993 IMPA1P29218 277 aa20.92■□□□□ 0.94
HDDC3-203ENST00000494993 CXCR5P32302 372 aa20.92■□□□□ 0.94
HDDC3-203ENST00000494993 SKIV2L2P42285 1042 aaKnown RBP20.92■□□□□ 0.94
HDDC3-203ENST00000494993 AVPR1BP47901 424 aa20.92■□□□□ 0.94
HDDC3-203ENST00000494993 SNRPNP63162 240 aaKnown RBP20.92■□□□□ 0.94
HDDC3-203ENST00000494993 HIBCHQ6NVY1 386 aaPredicted RBP20.92■□□□□ 0.94
HDDC3-203ENST00000494993 CYHR1Q6ZMK1 362 aa20.92■□□□□ 0.94
HDDC3-203ENST00000494993 TRIM58Q8NG06 486 aa20.92■□□□□ 0.94
HDDC3-203ENST00000494993 RELTQ969Z4 430 aa20.92■□□□□ 0.94
HDDC3-203ENST00000494993 IMMP1LQ96LU5 166 aa20.92■□□□□ 0.94
HDDC3-203ENST00000494993 TUBB6Q9BUF5 446 aa20.92■□□□□ 0.94
HDDC3-203ENST00000494993 ENTPD4Q9Y227 616 aa20.92■□□□□ 0.94
HDDC3-203ENST00000494993 DHRS7Q9Y394 339 aa20.92■□□□□ 0.94
HDDC3-203ENST00000494993 ZCWPW2A0A1B0GU75 182 aa20.91■□□□□ 0.94
HDDC3-203ENST00000494993 MAGEB16A2A368 324 aa20.91■□□□□ 0.94
HDDC3-203ENST00000494993 SDR42E2A6NKP2 422 aa20.91■□□□□ 0.94
HDDC3-203ENST00000494993 H7BY64 318 aa20.91■□□□□ 0.94
HDDC3-203ENST00000494993 ZBTB14O43829 449 aa20.91■□□□□ 0.94
HDDC3-203ENST00000494993 KRT14P02533 472 aa20.91■□□□□ 0.94
HDDC3-203ENST00000494993 CCDC175P0C221 793 aa20.91■□□□□ 0.94
HDDC3-203ENST00000494993 C8orf89P0DMQ9 161 aa20.91■□□□□ 0.94
HDDC3-203ENST00000494993 SLC1A2P43004 574 aa20.91■□□□□ 0.94
HDDC3-203ENST00000494993 AMER2Q8N7J2 671 aa20.91■□□□□ 0.94
HDDC3-203ENST00000494993 OR9A4Q8NGU2 314 aa20.91■□□□□ 0.94
HDDC3-203ENST00000494993 PRAP1Q96NZ9 151 aa20.91■□□□□ 0.94
HDDC3-203ENST00000494993 GPR21Q99679 349 aa20.91■□□□□ 0.94
HDDC3-203ENST00000494993 H0YIG0 161 aa20.9■□□□□ 0.94
HDDC3-203ENST00000494993 HNRNPRO43390 633 aaKnown RBP20.9■□□□□ 0.94
HDDC3-203ENST00000494993 KIF5CO60282 957 aa20.9■□□□□ 0.94
HDDC3-203ENST00000494993 STATHP02808 62 aa20.9■□□□□ 0.94
HDDC3-203ENST00000494993 ABHD17BQ5VST6 288 aa20.9■□□□□ 0.94
HDDC3-203ENST00000494993 TTC27Q6P3X3 843 aa20.9■□□□□ 0.94
HDDC3-203ENST00000494993 GFRALQ6UXV0 394 aa20.9■□□□□ 0.94
HDDC3-203ENST00000494993 UBE2R2Q712K3 238 aaPredicted RBP20.9■□□□□ 0.94
HDDC3-203ENST00000494993 CPNE9Q8IYJ1 553 aa20.9■□□□□ 0.94
HDDC3-203ENST00000494993 MCUQ8NE86 351 aa20.9■□□□□ 0.94
HDDC3-203ENST00000494993 CD200R1Q8TD46 325 aa20.9■□□□□ 0.94
HDDC3-203ENST00000494993 METTL21AQ8WXB1 218 aa20.9■□□□□ 0.94
HDDC3-203ENST00000494993 MARVELD3Q96A59 401 aa20.9■□□□□ 0.94
HDDC3-203ENST00000494993 SERPINB12Q96P63 405 aa20.9■□□□□ 0.94
HDDC3-203ENST00000494993 VN1R1Q9GZP7 353 aa20.9■□□□□ 0.94
HDDC3-203ENST00000494993 XAB2Q9HCS7 855 aaKnown RBP20.9■□□□□ 0.94
HDDC3-203ENST00000494993 TMEM184CQ9NVA4 438 aa20.9■□□□□ 0.94
HDDC3-203ENST00000494993 ABI3Q9P2A4 366 aa20.9■□□□□ 0.94
HDDC3-203ENST00000494993 COMMD10Q9Y6G5 202 aa20.9■□□□□ 0.94
HDDC3-203ENST00000494993 ARHGAP10A1A4S6 786 aa20.89■□□□□ 0.93
HDDC3-203ENST00000494993 OR5H15A6NDH6 313 aa20.89■□□□□ 0.93
HDDC3-203ENST00000494993 RASAL1O95294 804 aa20.89■□□□□ 0.93
HDDC3-203ENST00000494993 NSA2O95478 260 aaKnown RBP20.89■□□□□ 0.93
HDDC3-203ENST00000494993 CYC1P08574 325 aa20.89■□□□□ 0.93
HDDC3-203ENST00000494993 HRH2P25021 359 aa20.89■□□□□ 0.93
HDDC3-203ENST00000494993 TNFRSF8P28908 595 aa20.89■□□□□ 0.93
HDDC3-203ENST00000494993 RPS15AP62244 130 aaKnown RBP20.89■□□□□ 0.93
HDDC3-203ENST00000494993 PRSS41Q7RTY9 318 aa20.89■□□□□ 0.93
HDDC3-203ENST00000494993 PIWIL4Q7Z3Z4 852 aaKnown RBP20.89■□□□□ 0.93
HDDC3-203ENST00000494993 VN1R4Q7Z5H5 301 aa20.89■□□□□ 0.93
HDDC3-203ENST00000494993 LMNTD2Q8IXW0 634 aa20.89■□□□□ 0.93
HDDC3-203ENST00000494993 SUN3Q8TAQ9 357 aa20.89■□□□□ 0.93
HDDC3-203ENST00000494993 CCDC177Q9NQR7 707 aaPredicted RBP20.89■□□□□ 0.93
HDDC3-203ENST00000494993 COPG2Q9UBF2 871 aa20.89■□□□□ 0.93
HDDC3-203ENST00000494993 CSMD1Q96PZ7 3565 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms