RNA–Protein interactions for RNA: ENST00000494163.1

IFT172-215, Transcript of intraflagellar transport 172, human

TSL 3

Gene IFT172, Length 607 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFT172-215	ENST00000494163	SBK3	P0C264	359 aa		13.76	□□□□□ -0.21
IFT172-215	ENST00000494163	CCNYL3	P0C7X3	344 aa		13.76	□□□□□ -0.21
IFT172-215	ENST00000494163	C1GALT1C1L	P0DN25	315 aa		13.76	□□□□□ -0.21
IFT172-215	ENST00000494163	KRT4	P19013	534 aa		13.76	□□□□□ -0.21
IFT172-215	ENST00000494163	CCT5	P48643	541 aa		13.76	□□□□□ -0.21
IFT172-215	ENST00000494163	ARSF	P54793	590 aa		13.76	□□□□□ -0.21
IFT172-215	ENST00000494163	SLC18A2	Q05940	514 aa		13.76	□□□□□ -0.21
IFT172-215	ENST00000494163	ZNF844	Q08AG5	666 aa		13.76	□□□□□ -0.21
IFT172-215	ENST00000494163	GRM7	Q14831	915 aa		13.76	□□□□□ -0.21
IFT172-215	ENST00000494163	PCBP2	Q15366	365 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
IFT172-215	ENST00000494163	PDK4	Q16654	411 aa		13.76	□□□□□ -0.21
IFT172-215	ENST00000494163	KRT71	Q3SY84	523 aa		13.76	□□□□□ -0.21
IFT172-215	ENST00000494163	METTL2B	Q6P1Q9	378 aa	Known RBP	13.76	□□□□□ -0.21
IFT172-215	ENST00000494163	C16orf46	Q6P387	395 aa		13.76	□□□□□ -0.21
IFT172-215	ENST00000494163	SLCO4C1	Q6ZQN7	724 aa		13.76	□□□□□ -0.21
IFT172-215	ENST00000494163	TRABD2A	Q86V40	505 aa		13.76	□□□□□ -0.21
IFT172-215	ENST00000494163	TBC1D19	Q8N5T2	526 aa		13.76	□□□□□ -0.21
IFT172-215	ENST00000494163	PTGR2	Q8N8N7	351 aa	Predicted RBP	13.76	□□□□□ -0.21
IFT172-215	ENST00000494163	TTC29	Q8NA56	475 aa	Predicted RBP	13.76	□□□□□ -0.21
IFT172-215	ENST00000494163	SLC38A9	Q8NBW4	561 aa		13.76	□□□□□ -0.21
IFT172-215	ENST00000494163	RERG	Q96A58	199 aa	Predicted RBP	13.76	□□□□□ -0.21
IFT172-215	ENST00000494163	NDC1	Q9BTX1	674 aa		13.76	□□□□□ -0.21
IFT172-215	ENST00000494163	SARG	Q9BW04	601 aa		13.76	□□□□□ -0.21
IFT172-215	ENST00000494163	STARD5	Q9NSY2	213 aa		13.76	□□□□□ -0.21
IFT172-215	ENST00000494163	WDR70	Q9NW82	654 aa		13.76	□□□□□ -0.21
IFT172-215	ENST00000494163	PADI1	Q9ULC6	663 aa		13.76	□□□□□ -0.21
IFT172-215	ENST00000494163	SRPK3	Q9UPE1	567 aa		13.76	□□□□□ -0.21
IFT172-215	ENST00000494163	MAP1B	P46821	2468 aa	Known RBP	13.76	□□□□□ -0.21
IFT172-215	ENST00000494163	TRBC2	A0A5B9	178 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	FEZF1	A0PJY2	475 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	STX16-NPEPL1	H3BU86	382 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	TXNDC9	O14530	226 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	COPE	O14579	308 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	STX16	O14662	325 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	LCMT2	O60294	686 aa	Known RBP	13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	H2AFY	O75367	372 aa	Known RBP	13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	KLK3	P07288	261 aa	Predicted RBP	13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	TAC1	P20366	129 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	CXCR2	P25025	360 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	CRHR1	P34998	444 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	RORA	P35398	523 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	BCL6	P41182	706 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	GCGR	P47871	477 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	REEP5	Q00765	189 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	MEF2A	Q02078	507 aa	Predicted RBP	13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	ABHD18	Q0P651	414 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	GPS2	Q13227	327 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	PRTG	Q2VWP7	1150 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	FAM214A	Q32MH5	1076 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	YOD1	Q5VVQ6	348 aa	Predicted RBP	13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	ATG9B	Q674R7	924 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	RHBDD2	Q6NTF9	364 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	LRIG3	Q6UXM1	1119 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	CROCCP2	Q86T23	111 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	SPACA3	Q8IXA5	215 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	C4orf33	Q8N1A6	199 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	IL22RA1	Q8N6P7	574 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	CSNK1A1L	Q8N752	337 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	MFSD9	Q8NBP5	474 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	MYRIP	Q8NFW9	859 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	PHF21B	Q96EK2	531 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	ZIM3	Q96PE6	472 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	AIF1L	Q9BQI0	150 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	EHD1	Q9H4M9	534 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	SYNPO2L	Q9H987	977 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	LHX9	Q9NQ69	397 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	CUTC	Q9NTM9	273 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	TXLNG	Q9NUQ3	528 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	GRID1	Q9ULK0	1009 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	ANGPTL3	Q9Y5C1	460 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	PCDHGA4	Q9Y5G9	962 aa		13.75	□□□□□ -0.21
IFT172-215	ENST00000494163	DMXL2	Q8TDJ6	3036 aa		13.74	□□□□□ -0.21
IFT172-215	ENST00000494163	SRRM3	A6NNA2	597 aa	Predicted RBP	13.74	□□□□□ -0.21
IFT172-215	ENST00000494163	MEN1	O00255	615 aa		13.74	□□□□□ -0.21
IFT172-215	ENST00000494163	RGS16	O15492	202 aa	Predicted RBP	13.74	□□□□□ -0.21
IFT172-215	ENST00000494163	OR1F1	O43749	312 aa		13.74	□□□□□ -0.21
IFT172-215	ENST00000494163	SIX3	O95343	332 aa	Predicted RBP	13.74	□□□□□ -0.21
IFT172-215	ENST00000494163	EPB42	P16452	691 aa		13.74	□□□□□ -0.21
IFT172-215	ENST00000494163	EPOR	P19235	508 aa		13.74	□□□□□ -0.21
IFT172-215	ENST00000494163	VARS	P26640	1264 aa	Known RBP	13.74	□□□□□ -0.21
IFT172-215	ENST00000494163	EEF1D	P29692	281 aa	Known RBP	13.74	□□□□□ -0.21
IFT172-215	ENST00000494163	STAT5A	P42229	794 aa		13.74	□□□□□ -0.21
IFT172-215	ENST00000494163	SCTR	P47872	440 aa		13.74	□□□□□ -0.21
IFT172-215	ENST00000494163	EMP3	P54852	163 aa		13.74	□□□□□ -0.21
IFT172-215	ENST00000494163	ST3GAL2	Q16842	350 aa		13.74	□□□□□ -0.21
IFT172-215	ENST00000494163	XKR6	Q5GH73	641 aa		13.74	□□□□□ -0.21
IFT172-215	ENST00000494163	MANEA	Q5SRI9	462 aa		13.74	□□□□□ -0.21
IFT172-215	ENST00000494163	CEP85L	Q5SZL2	805 aa		13.74	□□□□□ -0.21
IFT172-215	ENST00000494163	VN1R4	Q7Z5H5	301 aa		13.74	□□□□□ -0.21
IFT172-215	ENST00000494163	DSEL	Q8IZU8	1212 aa		13.74	□□□□□ -0.21
IFT172-215	ENST00000494163	TEX9	Q8N6V9	391 aa		13.74	□□□□□ -0.21
IFT172-215	ENST00000494163	CAMKV	Q8NCB2	501 aa		13.74	□□□□□ -0.21
IFT172-215	ENST00000494163	ZNF740	Q8NDX6	193 aa		13.74	□□□□□ -0.21
IFT172-215	ENST00000494163	PROKR1	Q8TCW9	393 aa		13.74	□□□□□ -0.21
IFT172-215	ENST00000494163	MR1	Q95460	341 aa		13.74	□□□□□ -0.21
IFT172-215	ENST00000494163	WDR34	Q96EX3	536 aa		13.74	□□□□□ -0.21
IFT172-215	ENST00000494163	NLN	Q9BYT8	704 aa		13.74	□□□□□ -0.21
IFT172-215	ENST00000494163	SPNS1	Q9H2V7	528 aa		13.74	□□□□□ -0.21
IFT172-215	ENST00000494163	GEMIN8	Q9NWZ8	242 aa	Known RBP	13.74	□□□□□ -0.21
IFT172-215	ENST00000494163	DHCR7	Q9UBM7	475 aa	Known RBP	13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms