RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 NPPAP01160 153 aa22.01■■□□□ 1.11
USF3-203ENST00000491165 THEGLP0DJG4 465 aa22.01■■□□□ 1.11
USF3-203ENST00000491165 NUP107P57740 925 aa22.01■■□□□ 1.11
USF3-203ENST00000491165 ZNF528Q3MIS6 628 aa22.01■■□□□ 1.11
USF3-203ENST00000491165 NANOGP8Q6NSW7 305 aa22.01■■□□□ 1.11
USF3-203ENST00000491165 ENPP7Q6UWV6 458 aa22.01■■□□□ 1.11
USF3-203ENST00000491165 PROSER1Q86XN7 944 aa22.01■■□□□ 1.11
USF3-203ENST00000491165 GPSM1Q86YR5 675 aa22.01■■□□□ 1.11
USF3-203ENST00000491165 FAM126AQ9BYI3 521 aaPredicted RBP22.01■■□□□ 1.11
USF3-203ENST00000491165 NANOGQ9H9S0 305 aa22.01■■□□□ 1.11
USF3-203ENST00000491165 ZSCAN32Q9NX65 697 aa22.01■■□□□ 1.11
USF3-203ENST00000491165 SLC23A2Q9UGH3 650 aa22.01■■□□□ 1.11
USF3-203ENST00000491165 CACNA1HO95180 2353 aa22.01■■□□□ 1.11
USF3-203ENST00000491165 TSPAN12O95859 305 aa22■■□□□ 1.11
USF3-203ENST00000491165 ENO2P09104 434 aaPredicted RBP22■■□□□ 1.11
USF3-203ENST00000491165 OR56A5P0C7T3 313 aa22■■□□□ 1.11
USF3-203ENST00000491165 HTR1EP28566 365 aa22■■□□□ 1.11
USF3-203ENST00000491165 NUDT1P36639 197 aa22■■□□□ 1.11
USF3-203ENST00000491165 KIAA1024LP59773 190 aa22■■□□□ 1.11
USF3-203ENST00000491165 ZNF658BQ4V348 819 aaPredicted RBP22■■□□□ 1.11
USF3-203ENST00000491165 DHRS4L2Q6PKH6 230 aa22■■□□□ 1.11
USF3-203ENST00000491165 PATL1Q86TB9 770 aaKnown RBP22■■□□□ 1.11
USF3-203ENST00000491165 FNDC5Q8NAU1 212 aa22■■□□□ 1.11
USF3-203ENST00000491165 OR1E3Q8WZA6 343 aa22■■□□□ 1.11
USF3-203ENST00000491165 TSACCQ96A04 125 aaPredicted RBP22■■□□□ 1.11
USF3-203ENST00000491165 CD274Q9NZQ7 290 aa22■■□□□ 1.11
USF3-203ENST00000491165 SLAMF8Q9P0V8 285 aa22■■□□□ 1.11
USF3-203ENST00000491165 KLF15Q9UIH9 416 aa22■■□□□ 1.11
USF3-203ENST00000491165 CLIC3O95833 236 aa22■■□□□ 1.11
USF3-203ENST00000491165 HOXC4P09017 264 aaPredicted RBP22■■□□□ 1.11
USF3-203ENST00000491165 PBLDP30039 288 aaPredicted RBP22■■□□□ 1.11
USF3-203ENST00000491165 SOX11P35716 441 aa22■■□□□ 1.11
USF3-203ENST00000491165 DHPSP49366 369 aaPredicted RBP22■■□□□ 1.11
USF3-203ENST00000491165 IL2P60568 153 aa22■■□□□ 1.11
USF3-203ENST00000491165 YPEL5P62699 121 aa22■■□□□ 1.11
USF3-203ENST00000491165 RACK1P63244 317 aaKnown RBP22■■□□□ 1.11
USF3-203ENST00000491165 EMX2Q04743 252 aa22■■□□□ 1.11
USF3-203ENST00000491165 GPR180Q86V85 440 aa22■■□□□ 1.11
USF3-203ENST00000491165 LZICQ8WZA0 190 aa22■■□□□ 1.11
USF3-203ENST00000491165 LINGO1Q96FE5 620 aa22■■□□□ 1.11
USF3-203ENST00000491165 ZNF382Q96SR6 550 aa22■■□□□ 1.11
USF3-203ENST00000491165 NPLQ9BXD5 320 aaPredicted RBP22■■□□□ 1.11
USF3-203ENST00000491165 ZCCHC2Q9C0B9 1178 aaKnown RBP22■■□□□ 1.11
USF3-203ENST00000491165 INTS7Q9NVH2 962 aaKnown RBP22■■□□□ 1.11
USF3-203ENST00000491165 PLEKHM1Q9Y4G2 1056 aa22■■□□□ 1.11
USF3-203ENST00000491165 A0A0J9YVX5 310 aa21.99■■□□□ 1.11
USF3-203ENST00000491165 PRSS38A1L453 326 aa21.99■■□□□ 1.11
USF3-203ENST00000491165 E2F3O00716 465 aa21.99■■□□□ 1.11
USF3-203ENST00000491165 AP2A2O94973 939 aa21.99■■□□□ 1.11
USF3-203ENST00000491165 CD9P21926 228 aa21.99■■□□□ 1.11
USF3-203ENST00000491165 CD38P28907 300 aa21.99■■□□□ 1.11
USF3-203ENST00000491165 RABIFP47224 123 aa21.99■■□□□ 1.11
USF3-203ENST00000491165 HK3P52790 923 aa21.99■■□□□ 1.11
USF3-203ENST00000491165 TCEA2Q15560 299 aa21.99■■□□□ 1.11
USF3-203ENST00000491165 FXNQ16595 210 aa21.99■■□□□ 1.11
USF3-203ENST00000491165 BCL7AQ4VC05 210 aa21.99■■□□□ 1.11
USF3-203ENST00000491165 ATP6AP1LQ52LC2 224 aa21.99■■□□□ 1.11
USF3-203ENST00000491165 CYBRD1Q53TN4 286 aa21.99■■□□□ 1.11
USF3-203ENST00000491165 C6orf136Q5SQH8 315 aa21.99■■□□□ 1.11
USF3-203ENST00000491165 MAGEE2Q8TD90 523 aaPredicted RBP21.99■■□□□ 1.11
USF3-203ENST00000491165 EEF1AKMT1Q8WVE0 214 aa21.99■■□□□ 1.11
USF3-203ENST00000491165 PHF12Q96QT6 1004 aa21.99■■□□□ 1.11
USF3-203ENST00000491165 RPF2Q9H7B2 306 aaKnown RBP21.99■■□□□ 1.11
USF3-203ENST00000491165 MOSPD1Q9UJG1 213 aa21.99■■□□□ 1.11
USF3-203ENST00000491165 COMMD10Q9Y6G5 202 aa21.99■■□□□ 1.11
USF3-203ENST00000491165 ANKRD12Q6UB98 2062 aa21.99■■□□□ 1.11
USF3-203ENST00000491165 TMEM131Q92545 1883 aa21.99■■□□□ 1.11
USF3-203ENST00000491165 CACNA1EQ15878 2313 aa21.99■■□□□ 1.11
USF3-203ENST00000491165 OR4F21O95013 312 aa21.98■■□□□ 1.11
USF3-203ENST00000491165 VARSP26640 1264 aaKnown RBP21.98■■□□□ 1.11
USF3-203ENST00000491165 IL12AP29459 219 aa21.98■■□□□ 1.11
USF3-203ENST00000491165 PRKG2Q13237 762 aa21.98■■□□□ 1.11
USF3-203ENST00000491165 ZNF542PQ5EBM4 170 aa21.98■■□□□ 1.11
USF3-203ENST00000491165 ZFAND4Q86XD8 727 aa21.98■■□□□ 1.11
USF3-203ENST00000491165 VRK3Q8IV63 474 aa21.98■■□□□ 1.11
USF3-203ENST00000491165 CPNE9Q8IYJ1 553 aa21.98■■□□□ 1.11
USF3-203ENST00000491165 OFCC1Q8IZS5 231 aa21.98■■□□□ 1.11
USF3-203ENST00000491165 CDYL2Q8N8U2 506 aa21.98■■□□□ 1.11
USF3-203ENST00000491165 PROKR1Q8TCW9 393 aa21.98■■□□□ 1.11
USF3-203ENST00000491165 ESAMQ96AP7 390 aa21.98■■□□□ 1.11
USF3-203ENST00000491165 WDR92Q96MX6 357 aa21.98■■□□□ 1.11
USF3-203ENST00000491165 ZNHIT2Q9UHR6 403 aa21.98■■□□□ 1.11
USF3-203ENST00000491165 ZNF639Q9UID6 485 aa21.98■■□□□ 1.11
USF3-203ENST00000491165 TSR3Q9UJK0 312 aaKnown RBP21.98■■□□□ 1.11
USF3-203ENST00000491165 GPR34Q9UPC5 381 aa21.98■■□□□ 1.11
USF3-203ENST00000491165 DHRS7Q9Y394 339 aa21.98■■□□□ 1.11
USF3-203ENST00000491165 HEMK1Q9Y5R4 338 aaPredicted RBP21.98■■□□□ 1.11
USF3-203ENST00000491165 SPTY2D1-AS1A0A0U1RR47 76 aa21.98■■□□□ 1.11
USF3-203ENST00000491165 GALR2O43603 387 aaPredicted RBP21.98■■□□□ 1.11
USF3-203ENST00000491165 HRH2P25021 359 aa21.98■■□□□ 1.11
USF3-203ENST00000491165 AOAHP28039 575 aa21.98■■□□□ 1.11
USF3-203ENST00000491165 CSNK1EP49674 416 aaKnown RBP21.98■■□□□ 1.11
USF3-203ENST00000491165 BOP1Q14137 746 aaKnown RBP21.98■■□□□ 1.11
USF3-203ENST00000491165 FZD2Q14332 565 aa21.98■■□□□ 1.11
USF3-203ENST00000491165 LYSMD4Q5XG99 296 aa21.98■■□□□ 1.11
USF3-203ENST00000491165 HID1Q8IV36 788 aa21.98■■□□□ 1.11
USF3-203ENST00000491165 C12orf43Q96C57 262 aaKnown RBP21.98■■□□□ 1.11
USF3-203ENST00000491165 SCARF2Q96GP6 870 aaPredicted RBP21.98■■□□□ 1.11
USF3-203ENST00000491165 VPS50Q96JG6 964 aa21.98■■□□□ 1.11
USF3-203ENST00000491165 SEPHS2Q99611 448 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms