RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 MAGEC3Q8TD91 643 aa11.15□□□□□ -0.62
ACTN4-206ENST00000489451 MVB12AQ96EY5 273 aa11.15□□□□□ -0.62
ACTN4-206ENST00000489451 FOPNLQ96NB1 174 aa11.15□□□□□ -0.62
ACTN4-206ENST00000489451 TGIF2Q9GZN2 237 aa11.15□□□□□ -0.62
ACTN4-206ENST00000489451 OLAHQ9NV23 265 aa11.15□□□□□ -0.62
ACTN4-206ENST00000489451 PCYOX1Q9UHG3 505 aa11.15□□□□□ -0.62
ACTN4-206ENST00000489451 ITGB1BP2Q9UKP3 347 aa11.15□□□□□ -0.62
ACTN4-206ENST00000489451 SH2B3Q9UQQ2 575 aa11.15□□□□□ -0.62
ACTN4-206ENST00000489451 MYO7BQ6PIF6 2116 aa11.15□□□□□ -0.62
ACTN4-206ENST00000489451 SCN3AQ9NY46 2000 aa11.14□□□□□ -0.63
ACTN4-206ENST00000489451 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.14□□□□□ -0.63
ACTN4-206ENST00000489451 ARHGAP10A1A4S6 786 aa11.14□□□□□ -0.63
ACTN4-206ENST00000489451 H3BMM5 538 aa11.14□□□□□ -0.63
ACTN4-206ENST00000489451 GFYI3L273 518 aa11.14□□□□□ -0.63
ACTN4-206ENST00000489451 USP1O94782 785 aa11.14□□□□□ -0.63
ACTN4-206ENST00000489451 ERVK-10P10266 1014 aa11.14□□□□□ -0.63
ACTN4-206ENST00000489451 CHRM3P20309 590 aa11.14□□□□□ -0.63
ACTN4-206ENST00000489451 IMPA1P29218 277 aa11.14□□□□□ -0.63
ACTN4-206ENST00000489451 RPA3P35244 121 aaPredicted RBP11.14□□□□□ -0.63
ACTN4-206ENST00000489451 SKIV2L2P42285 1042 aaKnown RBP11.14□□□□□ -0.63
ACTN4-206ENST00000489451 VPS41P49754 854 aa11.14□□□□□ -0.63
ACTN4-206ENST00000489451 ARG2P78540 354 aa11.14□□□□□ -0.63
ACTN4-206ENST00000489451 TIAL1Q01085 375 aaKnown RBP eCLIP11.14□□□□□ -0.63
ACTN4-206ENST00000489451 RNF187Q5TA31 235 aaPredicted RBP11.14□□□□□ -0.63
ACTN4-206ENST00000489451 IRAK1BP1Q5VVH5 260 aa11.14□□□□□ -0.63
ACTN4-206ENST00000489451 NEPROQ6NW34 567 aa11.14□□□□□ -0.63
ACTN4-206ENST00000489451 FJX1Q86VR8 437 aa11.14□□□□□ -0.63
ACTN4-206ENST00000489451 RAB42Q8N4Z0 105 aa11.14□□□□□ -0.63
ACTN4-206ENST00000489451 BCORP1Q8N888 145 aa11.14□□□□□ -0.63
ACTN4-206ENST00000489451 FBXO15Q8NCQ5 510 aaPredicted RBP11.14□□□□□ -0.63
ACTN4-206ENST00000489451 NR4A3Q92570 626 aa11.14□□□□□ -0.63
ACTN4-206ENST00000489451 HAS2Q92819 552 aa11.14□□□□□ -0.63
ACTN4-206ENST00000489451 MMABQ96EY8 250 aaPredicted RBP11.14□□□□□ -0.63
ACTN4-206ENST00000489451 IMMP1LQ96LU5 166 aa11.14□□□□□ -0.63
ACTN4-206ENST00000489451 TCF12Q99081 682 aa11.14□□□□□ -0.63
ACTN4-206ENST00000489451 ZNF700Q9H0M5 742 aa11.14□□□□□ -0.63
ACTN4-206ENST00000489451 NEU2Q9Y3R4 380 aa11.14□□□□□ -0.63
ACTN4-206ENST00000489451 MRFAP1Q9Y605 127 aa11.14□□□□□ -0.63
ACTN4-206ENST00000489451 NAV3Q8IVL0 2385 aa11.13□□□□□ -0.63
ACTN4-206ENST00000489451 IGHV3-20A0A0C4DH32 117 aa11.13□□□□□ -0.63
ACTN4-206ENST00000489451 GOLGA6L10A0A0M3HER8 536 aa11.13□□□□□ -0.63
ACTN4-206ENST00000489451 OR2W5A6NFC9 320 aa11.13□□□□□ -0.63
ACTN4-206ENST00000489451 SMAPO00193 183 aa11.13□□□□□ -0.63
ACTN4-206ENST00000489451 PHF2O75151 1096 aa11.13□□□□□ -0.63
ACTN4-206ENST00000489451 VPS26AO75436 327 aa11.13□□□□□ -0.63
ACTN4-206ENST00000489451 BMP10O95393 424 aa11.13□□□□□ -0.63
ACTN4-206ENST00000489451 WDPCPO95876 746 aa11.13□□□□□ -0.63
ACTN4-206ENST00000489451 EZRP15311 586 aaKnown RBP11.13□□□□□ -0.63
ACTN4-206ENST00000489451 MAGEA3P43357 314 aa11.13□□□□□ -0.63
ACTN4-206ENST00000489451 SARNPP82979 210 aaKnown RBP11.13□□□□□ -0.63
ACTN4-206ENST00000489451 CDK16Q00536 496 aa11.13□□□□□ -0.63
ACTN4-206ENST00000489451 RELAQ04206 551 aa11.13□□□□□ -0.63
ACTN4-206ENST00000489451 CTBP1Q13363 440 aa11.13□□□□□ -0.63
ACTN4-206ENST00000489451 TSTA3Q13630 321 aaPredicted RBP11.13□□□□□ -0.63
ACTN4-206ENST00000489451 ZXDCQ2QGD7 858 aaPredicted RBP11.13□□□□□ -0.63
ACTN4-206ENST00000489451 GARNL3Q5VVW2 1013 aa11.13□□□□□ -0.63
ACTN4-206ENST00000489451 ZNF470Q6ECI4 717 aa11.13□□□□□ -0.63
ACTN4-206ENST00000489451 HIBCHQ6NVY1 386 aaPredicted RBP11.13□□□□□ -0.63
ACTN4-206ENST00000489451 LANCL3Q6ZV70 420 aa11.13□□□□□ -0.63
ACTN4-206ENST00000489451 NEK10Q6ZWH5 1172 aa11.13□□□□□ -0.63
ACTN4-206ENST00000489451 SDCCAG8Q86SQ7 713 aaPredicted RBP11.13□□□□□ -0.63
ACTN4-206ENST00000489451 CD200R1Q8TD46 325 aa11.13□□□□□ -0.63
ACTN4-206ENST00000489451 ASB11Q8WXH4 323 aa11.13□□□□□ -0.63
ACTN4-206ENST00000489451 RELTQ969Z4 430 aa11.13□□□□□ -0.63
ACTN4-206ENST00000489451 CCDC138Q96M89 665 aa11.13□□□□□ -0.63
ACTN4-206ENST00000489451 NPAS2Q99743 824 aa11.13□□□□□ -0.63
ACTN4-206ENST00000489451 MACROD1Q9BQ69 325 aa11.13□□□□□ -0.63
ACTN4-206ENST00000489451 UNKQ9C0B0 810 aaKnown RBP11.13□□□□□ -0.63
ACTN4-206ENST00000489451 VN1R1Q9GZP7 353 aa11.13□□□□□ -0.63
ACTN4-206ENST00000489451 DRC3Q9H069 523 aa11.13□□□□□ -0.63
ACTN4-206ENST00000489451 MKKSQ9NPJ1 570 aaPredicted RBP11.13□□□□□ -0.63
ACTN4-206ENST00000489451 FBXO6Q9NRD1 293 aaPredicted RBP11.13□□□□□ -0.63
ACTN4-206ENST00000489451 C14orf105Q9NVL8 296 aa11.13□□□□□ -0.63
ACTN4-206ENST00000489451 RIC8BQ9NVN3 520 aa11.13□□□□□ -0.63
ACTN4-206ENST00000489451 ENTPD4Q9Y227 616 aa11.13□□□□□ -0.63
ACTN4-206ENST00000489451 DNHD1Q96M86 4753 aa11.13□□□□□ -0.63
ACTN4-206ENST00000489451 NCOA6Q14686 2063 aaPredicted RBP11.13□□□□□ -0.63
ACTN4-206ENST00000489451 ABCA2Q9BZC7 2435 aa11.12□□□□□ -0.63
ACTN4-206ENST00000489451 TRAV17A0A0B4J275 112 aa11.12□□□□□ -0.63
ACTN4-206ENST00000489451 H7BY64 318 aa11.12□□□□□ -0.63
ACTN4-206ENST00000489451 PGRMC1O00264 195 aaKnown RBP11.12□□□□□ -0.63
ACTN4-206ENST00000489451 CATP04040 527 aaKnown RBP11.12□□□□□ -0.63
ACTN4-206ENST00000489451 HEXBP07686 556 aa11.12□□□□□ -0.63
ACTN4-206ENST00000489451 FDXRP22570 491 aa11.12□□□□□ -0.63
ACTN4-206ENST00000489451 SLC1A2P43004 574 aa11.12□□□□□ -0.63
ACTN4-206ENST00000489451 ST13P50502 369 aaKnown RBP11.12□□□□□ -0.63
ACTN4-206ENST00000489451 MPP1Q00013 466 aa11.12□□□□□ -0.63
ACTN4-206ENST00000489451 PMP22Q01453 160 aa11.12□□□□□ -0.63
ACTN4-206ENST00000489451 GPS1Q13098 491 aa11.12□□□□□ -0.63
ACTN4-206ENST00000489451 FAM53BQ14153 422 aa11.12□□□□□ -0.63
ACTN4-206ENST00000489451 NAA25Q14CX7 972 aa11.12□□□□□ -0.63
ACTN4-206ENST00000489451 MBOAT1Q6ZNC8 495 aa11.12□□□□□ -0.63
ACTN4-206ENST00000489451 RIPOR1Q6ZS17 1223 aa11.12□□□□□ -0.63
ACTN4-206ENST00000489451 PIWIL4Q7Z3Z4 852 aaKnown RBP11.12□□□□□ -0.63
ACTN4-206ENST00000489451 PDSS2Q86YH6 399 aa11.12□□□□□ -0.63
ACTN4-206ENST00000489451 CPNE9Q8IYJ1 553 aa11.12□□□□□ -0.63
ACTN4-206ENST00000489451 MMP21Q8N119 569 aa11.12□□□□□ -0.63
ACTN4-206ENST00000489451 OR9A4Q8NGU2 314 aa11.12□□□□□ -0.63
ACTN4-206ENST00000489451 ITLN2Q8WWU7 325 aaPredicted RBP11.12□□□□□ -0.63
ACTN4-206ENST00000489451 KCNJ9Q92806 393 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms