RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 LAPTM5Q13571 262 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 C16orf72Q14CZ0 275 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 RBBP7Q16576 425 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 TTMPQ5BVD1 217 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 XKR6Q5GH73 641 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 PAGE2BQ5JRK9 111 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 ZNF678Q5SXM1 525 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 TMEM164Q5U3C3 297 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 LIPMQ5VYY2 423 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 NXPE4Q6UWF7 544 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 GOLGA7Q7Z5G4 137 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 TMPRSS11BQ86T26 416 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 MYLK4Q86YV6 388 aaPredicted RBP9.88□□□□□ -0.83
SKA1-204ENST00000488454 NUDCD3Q8IVD9 361 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 C10orf107Q8IVU9 208 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 KRT78Q8N1N4 520 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 D2HGDHQ8N465 521 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 ABHD11Q8NFV4 315 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 WDR36Q8NI36 951 aaKnown RBP9.88□□□□□ -0.83
SKA1-204ENST00000488454 NEIL2Q969S2 332 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 RERGQ96A58 199 aaPredicted RBP9.88□□□□□ -0.83
SKA1-204ENST00000488454 AIF1LQ9BQI0 150 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 CHRNA10Q9GZZ6 450 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 ALG2Q9H553 416 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 IPPKQ9H8X2 491 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 PELI2Q9HAT8 420 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 SLC6A20Q9NP91 592 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 OXSMQ9NWU1 459 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 IRAK4Q9NWZ3 460 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 SLC39A1Q9NY26 324 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 SERTAD3Q9UJW9 196 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 PLCL2Q9UPR0 1127 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 BTRCQ9Y297 605 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 KLK4Q9Y5K2 254 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 RP1P56715 2156 aa9.88□□□□□ -0.83
SKA1-204ENST00000488454 CEP250Q9BV73 2442 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 A0A0J9YVX5 310 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 WDR91A4D1P6 747 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 OR2A25A4D2G3 310 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 LRRC14BA6NHZ5 514 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 B4E171 279 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 E7EQ34 232 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 E2F3O00716 465 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 PLD2O14939 933 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 POLR1CO15160 346 aaPredicted RBP9.87□□□□□ -0.83
SKA1-204ENST00000488454 BIRC5O15392 142 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 SRPX2O60687 465 aaPredicted RBP9.87□□□□□ -0.83
SKA1-204ENST00000488454 PRAMEF10O60809 474 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 MLYCDO95822 493 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 BPGMP07738 259 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 EBLN1P0CF75 366 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 EZRP15311 586 aaKnown RBP9.87□□□□□ -0.83
SKA1-204ENST00000488454 FOLR1P15328 257 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 RBMS1P29558 406 aaKnown RBP9.87□□□□□ -0.83
SKA1-204ENST00000488454 ALDH3A1P30838 453 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 TSPAN7P41732 249 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 CCNG1P51959 295 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 PDX1P52945 283 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 RPS15AP62244 130 aaKnown RBP9.87□□□□□ -0.83
SKA1-204ENST00000488454 YBX1P67809 324 aaKnown RBP9.87□□□□□ -0.83
SKA1-204ENST00000488454 CSNK1G2P78368 415 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 MC2RQ01718 297 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 RELAQ04206 551 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 CLCQ05315 142 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 CHIT1Q13231 466 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 IL11RAQ14626 422 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 KCNAB1Q14722 419 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 RBBP5Q15291 538 aaKnown RBP9.87□□□□□ -0.83
SKA1-204ENST00000488454 ZIC1Q15915 447 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 CATSPEREQ5SY80 951 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 ATG9BQ674R7 924 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 FCRL6Q6DN72 434 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 FBXO42Q6P3S6 717 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 MILR1Q7Z6M3 343 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 PAQR7Q86WK9 346 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 MCATQ8IVS2 390 aaKnown RBP9.87□□□□□ -0.83
SKA1-204ENST00000488454 OR4K1Q8NGD4 311 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 OR8K5Q8NH50 307 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 MGARPQ8TDB4 240 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 UBE2E3Q969T4 207 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 L3HYPDHQ96EM0 354 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 PTCD3Q96EY7 689 aaKnown RBP9.87□□□□□ -0.83
SKA1-204ENST00000488454 MAGEB10Q96LZ2 347 aaPredicted RBP9.87□□□□□ -0.83
SKA1-204ENST00000488454 TMEM237Q96Q45 408 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 OR6C1Q96RD1 312 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 ZFYVE21Q9BQ24 234 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 EFCAB11Q9BUY7 163 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 C1QTNF3Q9BXJ4 246 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 DRC3Q9H069 523 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 EHD1Q9H4M9 534 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 NOL11Q9H8H0 719 aaKnown RBP9.87□□□□□ -0.83
SKA1-204ENST00000488454 ACTR8Q9H981 624 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 FAM60AQ9NP50 221 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 MED4Q9NPJ6 270 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 SEMA4BQ9NPR2 832 aaPredicted RBP9.87□□□□□ -0.83
SKA1-204ENST00000488454 FBXO8Q9NRD0 319 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 FGF21Q9NSA1 209 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 CUEDC1Q9NWM3 386 aaPredicted RBP9.87□□□□□ -0.83
SKA1-204ENST00000488454 OCIAD1Q9NX40 245 aa9.87□□□□□ -0.83
SKA1-204ENST00000488454 PCTPQ9UKL6 214 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms