RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 HSD3B7Q9H2F3 369 aa6.61□□□□□ -1.35
HDAC3-209ENST00000486618 CATSPERBQ9H7T0 1116 aa6.61□□□□□ -1.35
HDAC3-209ENST00000486618 CNTD2Q9H8S5 307 aa6.61□□□□□ -1.35
HDAC3-209ENST00000486618 UCK1Q9HA47 277 aa6.61□□□□□ -1.35
HDAC3-209ENST00000486618 TMEM9Q9P0T7 183 aa6.61□□□□□ -1.35
HDAC3-209ENST00000486618 CD300AQ9UGN4 299 aa6.61□□□□□ -1.35
HDAC3-209ENST00000486618 ANAPC5Q9UJX4 755 aa6.61□□□□□ -1.35
HDAC3-209ENST00000486618 KCND3Q9UK17 655 aa6.61□□□□□ -1.35
HDAC3-209ENST00000486618 TLK1Q9UKI8 766 aa6.61□□□□□ -1.35
HDAC3-209ENST00000486618 CTNND2Q9UQB3 1225 aa6.61□□□□□ -1.35
HDAC3-209ENST00000486618 ST14Q9Y5Y6 855 aa6.61□□□□□ -1.35
HDAC3-209ENST00000486618 DIDO1Q9BTC0 2240 aaKnown RBP6.61□□□□□ -1.35
HDAC3-209ENST00000486618 A0A1W2PQ67 120 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 CCDC78A2IDD5 438 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 XKRY2A2RUG3 117 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 LRRD1A4D1F6 860 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 E9PBE3 544 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 H7BY64 318 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 K7EM74 188 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 BUB1BO60566 1050 aaPredicted RBP6.6□□□□□ -1.35
HDAC3-209ENST00000486618 SEMA7AO75326 666 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 IVLP07476 585 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 TPBGLP0DKB5 382 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 ANXA8P13928 327 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 CYP11B1P15538 503 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 ELAVL4P26378 380 aaKnown RBP6.6□□□□□ -1.35
HDAC3-209ENST00000486618 PON1P27169 355 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 TEAD1P28347 426 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 ADSLP30566 484 aaPredicted RBP6.6□□□□□ -1.35
HDAC3-209ENST00000486618 TTKP33981 857 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 DCTP40126 519 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 ADCY8P40145 1251 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 ACTR1BP42025 376 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 PTPN9P43378 593 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 PMS2P54278 862 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 UBE2IP63279 158 aaKnown RBP6.6□□□□□ -1.35
HDAC3-209ENST00000486618 MAMLD1Q13495 774 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 SKOR2Q2VWA4 1001 aaPredicted RBP6.6□□□□□ -1.35
HDAC3-209ENST00000486618 PPP6R3Q5H9R7 873 aaPredicted RBP6.6□□□□□ -1.35
HDAC3-209ENST00000486618 ANXA8L1Q5VT79 327 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 TRNP1Q6NT89 227 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 PHLDB2Q86SQ0 1253 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 ZSWIM9Q86XI8 627 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 TICAM1Q8IUC6 712 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 SLC22A9Q8IVM8 553 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 APLFQ8IW19 511 aaPredicted RBP6.6□□□□□ -1.35
HDAC3-209ENST00000486618 TUSC5Q8IXB3 177 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 UMODL1-AS1Q8N2C9 162 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 BBS5Q8N3I7 341 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 LZTR1Q8N653 840 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 EMC1Q8N766 993 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 ZNF321PQ8N8H1 164 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 C3orf20Q8ND61 904 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 C7orf57Q8NEG2 295 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 HUS1BQ8NHY5 278 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 RXFP2Q8WXD0 754 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 SEC14L1Q92503 715 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 NCSTNQ92542 709 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 NTAN1Q96AB6 310 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 MIEF2Q96C03 454 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 ECHDC3Q96DC8 303 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 NUS1Q96E22 293 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 DTNBP1Q96EV8 351 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 COX4I2Q96KJ9 171 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 COQ10AQ96MF6 247 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 OR2M4Q96R27 311 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 HAUS8Q9BT25 410 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 AARSD1Q9BTE6 412 aaKnown RBP6.6□□□□□ -1.35
HDAC3-209ENST00000486618 FRMD8Q9BZ67 464 aaPredicted RBP6.6□□□□□ -1.35
HDAC3-209ENST00000486618 ULBP3Q9BZM4 244 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 TWSG1Q9GZX9 223 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 KLC2Q9H0B6 622 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 EPB41L1Q9H4G0 881 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 NOL6Q9H6R4 1146 aaKnown RBP6.6□□□□□ -1.35
HDAC3-209ENST00000486618 KCNK13Q9HB14 408 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 SARS2Q9NP81 518 aaKnown RBP6.6□□□□□ -1.35
HDAC3-209ENST00000486618 OR6C2Q9NZP2 312 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 ADAM30Q9UKF2 790 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 MAN1B1Q9UKM7 699 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 SRPK3Q9UPE1 567 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 SLC17A4Q9Y2C5 497 aa6.6□□□□□ -1.35
HDAC3-209ENST00000486618 TNRC6AQ8NDV7 1962 aaKnown RBP6.59□□□□□ -1.35
HDAC3-209ENST00000486618 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.59□□□□□ -1.35
HDAC3-209ENST00000486618 PIPSLA2A3N6 862 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 ARHGAP42A6NI28 874 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 WASH4PA8MWX3 477 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 A8MX80 341 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 EIF3CLB5ME19 914 aaKnown RBP6.59□□□□□ -1.35
HDAC3-209ENST00000486618 FGF10O15520 208 aaPredicted RBP6.59□□□□□ -1.35
HDAC3-209ENST00000486618 B3GALT2O43825 422 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 PRAMEF11O60813 436 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 LRCH4O75427 683 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 CREG1O75629 220 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 BCAS2O75934 225 aaPredicted RBP6.59□□□□□ -1.35
HDAC3-209ENST00000486618 UBXN7O94888 489 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 FUCA1P04066 466 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 SLC2A4P14672 509 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 IDO1P14902 403 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 TNFRSF8P28908 595 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 NUP62P37198 522 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms