RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 SNRNP200O75643 2136 aaKnown RBP11.32□□□□□ -0.6
HMGN1-213ENST00000482192 COL6A6A6NMZ7 2263 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 ZNF462Q96JM2 2506 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 IGLV3-12A0A075B6K2 115 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 ESYT3A0FGR9 886 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 NPEPPSL1A6NEC2 478 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 A6NL46 340 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 CXorf49A8MYA2 514 aaPredicted RBP11.31□□□□□ -0.6
HMGN1-213ENST00000482192 CDC7O00311 574 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 P2RX6O15547 441 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 KLHL41O60662 606 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 TUBB4AP04350 444 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 ANXA5P08758 320 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 CDH1P12830 882 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 STX2P32856 288 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 GP5P40197 560 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 MAGEA4P43358 317 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 CCR8P51685 355 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 GPX6P59796 221 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 CSNK1G2P78368 415 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 CDKL1Q00532 357 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 FAM53BQ14153 422 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 TRADDQ15628 312 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 ZXDCQ2QGD7 858 aaPredicted RBP11.31□□□□□ -0.6
HMGN1-213ENST00000482192 SHISA6Q6ZSJ9 500 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 VN1R4Q7Z5H5 301 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 ADAMTSL2Q86TH1 951 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 TMEM151BQ8IW70 566 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 CTAGE3PQ8IX95 158 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 ARHGEF39Q8N4T4 335 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 ABHD11Q8NFV4 315 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 STT3BQ8TCJ2 826 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 MIEF2Q96C03 454 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 PYCR2Q96C36 320 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 MMABQ96EY8 250 aaPredicted RBP11.31□□□□□ -0.6
HMGN1-213ENST00000482192 VPS50Q96JG6 964 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 GPR22Q99680 433 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 LRRC1Q9BTT6 524 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 CRB3Q9BUF7 120 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 NUDT9Q9BW91 350 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 IKZF3Q9UKT9 509 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 MTO1Q9Y2Z2 717 aaKnown RBP11.31□□□□□ -0.6
HMGN1-213ENST00000482192 ZNF451Q9Y4E5 1061 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 HS3ST3B1Q9Y662 390 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 CFAP46Q8IYW2 2715 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 PIEZO2Q9H5I5 2752 aa11.31□□□□□ -0.6
HMGN1-213ENST00000482192 PCSK5Q92824 1860 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 A0A0A6YYC8 382 aaPredicted RBP11.3□□□□□ -0.6
HMGN1-213ENST00000482192 PYCARD-AS1I3L0S3 204 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 I3L1I5 382 aaPredicted RBP11.3□□□□□ -0.6
HMGN1-213ENST00000482192 WISP1O95388 367 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 C1QAP02745 245 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 ALPPP05187 535 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 ZGLP1P0C6A0 271 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 STMN1P16949 149 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 SLC26A3P40879 764 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 BCL6P41182 706 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 AVPR1BP47901 424 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 HNMTP50135 292 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 CSRP3P50461 194 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 SLC7A5Q01650 507 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 KLC1Q07866 573 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 AIMP2Q13155 320 aaKnown RBP11.3□□□□□ -0.6
HMGN1-213ENST00000482192 NAB1Q13506 487 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 USP10Q14694 798 aaKnown RBP11.3□□□□□ -0.6
HMGN1-213ENST00000482192 TSNQ15631 228 aaKnown RBP11.3□□□□□ -0.6
HMGN1-213ENST00000482192 RBBP7Q16576 425 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 KBTBD12Q3ZCT8 623 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 VWA5B1Q5TIE3 1220 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 FRA10AC1Q70Z53 315 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 ASPGQ86U10 573 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 GALNT16Q8N428 558 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 TBC1D19Q8N5T2 526 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 AMER3Q8N944 861 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 CAMKVQ8NCB2 501 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 MNS1Q8NEH6 495 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 ANKRD49Q8WVL7 239 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 OR4K3Q96R72 315 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 SMAD5Q99717 465 aaKnown RBP11.3□□□□□ -0.6
HMGN1-213ENST00000482192 EGFL8Q99944 293 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 YIPF2Q9BWQ6 316 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 DERL2Q9GZP9 239 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 CAB39LQ9H9S4 337 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 LRRC4CQ9HCJ2 640 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 MKKSQ9NPJ1 570 aaPredicted RBP11.3□□□□□ -0.6
HMGN1-213ENST00000482192 ATP13A2Q9NQ11 1180 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 C14orf105Q9NVL8 296 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 TRPC4Q9UBN4 977 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 CTNNAL1Q9UBT7 734 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 FBXL4Q9UKA2 621 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 MAP4K5Q9Y4K4 846 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 OARD1Q9Y530 152 aa11.3□□□□□ -0.6
HMGN1-213ENST00000482192 FEZF1A0PJY2 475 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 H0YIG0 161 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 KIF2AO00139 706 aaPredicted RBP11.29□□□□□ -0.6
HMGN1-213ENST00000482192 SOCS6O14544 535 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 FOXS1O43638 330 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 DPM1O60762 260 aa11.29□□□□□ -0.6
HMGN1-213ENST00000482192 IPO13O94829 963 aaKnown RBP11.29□□□□□ -0.6
HMGN1-213ENST00000482192 WISP3O95389 354 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms