RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 SLC34A3Q8N130 599 aa20.58■□□□□ 0.89
SDF4-206ENST00000478938 CRELD1Q96HD1 420 aa20.58■□□□□ 0.89
SDF4-206ENST00000478938 SORCS2Q96PQ0 1159 aa20.58■□□□□ 0.89
SDF4-206ENST00000478938 RBP7Q96R05 134 aa20.58■□□□□ 0.89
SDF4-206ENST00000478938 C12orf57Q99622 126 aa20.58■□□□□ 0.89
SDF4-206ENST00000478938 SHARPINQ9H0F6 387 aa20.58■□□□□ 0.89
SDF4-206ENST00000478938 HEBP1Q9NRV9 189 aa20.58■□□□□ 0.89
SDF4-206ENST00000478938 C1orf109Q9NX04 203 aa20.58■□□□□ 0.89
SDF4-206ENST00000478938 ING4Q9UNL4 249 aa20.58■□□□□ 0.89
SDF4-206ENST00000478938 AAR2Q9Y312 384 aaKnown RBP20.58■□□□□ 0.89
SDF4-206ENST00000478938 CSNK1G3Q9Y6M4 447 aa20.58■□□□□ 0.89
SDF4-206ENST00000478938 OR4F21O95013 312 aa20.58■□□□□ 0.88
SDF4-206ENST00000478938 FAM157BP0CG42 384 aa20.58■□□□□ 0.88
SDF4-206ENST00000478938 STAG3L1P0CL83 205 aa20.58■□□□□ 0.88
SDF4-206ENST00000478938 POU1F1P28069 291 aa20.58■□□□□ 0.88
SDF4-206ENST00000478938 CLCN4P51793 760 aa20.58■□□□□ 0.88
SDF4-206ENST00000478938 MAPKAPK3Q16644 382 aa20.58■□□□□ 0.88
SDF4-206ENST00000478938 ZNF284Q2VY69 593 aa20.58■□□□□ 0.88
SDF4-206ENST00000478938 OR4F3Q6IEY1 312 aa20.58■□□□□ 0.88
SDF4-206ENST00000478938 VTCN1Q7Z7D3 282 aa20.58■□□□□ 0.88
SDF4-206ENST00000478938 B3GNT7Q8NFL0 401 aa20.58■□□□□ 0.88
SDF4-206ENST00000478938 OR7G3Q8NG95 312 aa20.58■□□□□ 0.88
SDF4-206ENST00000478938 OR6P1Q8NGX9 317 aa20.58■□□□□ 0.88
SDF4-206ENST00000478938 FAM120BQ96EK7 910 aaKnown RBP20.58■□□□□ 0.88
SDF4-206ENST00000478938 FSD1LQ9BXM9 530 aa20.58■□□□□ 0.88
SDF4-206ENST00000478938 THUMPD1Q9NXG2 353 aaKnown RBP20.58■□□□□ 0.88
SDF4-206ENST00000478938 KCNMB2Q9Y691 235 aa20.58■□□□□ 0.88
SDF4-206ENST00000478938 IFNA7P01567 189 aa20.57■□□□□ 0.88
SDF4-206ENST00000478938 NPR1P16066 1061 aa20.57■□□□□ 0.88
SDF4-206ENST00000478938 PTPRAP18433 802 aa20.57■□□□□ 0.88
SDF4-206ENST00000478938 NUP62P37198 522 aaPredicted RBP20.57■□□□□ 0.88
SDF4-206ENST00000478938 KIAA0040Q15053 153 aa20.57■□□□□ 0.88
SDF4-206ENST00000478938 FAM209BQ5JX69 171 aa20.57■□□□□ 0.88
SDF4-206ENST00000478938 RETSATQ6NUM9 610 aa20.57■□□□□ 0.88
SDF4-206ENST00000478938 FAHD1Q6P587 224 aa20.57■□□□□ 0.88
SDF4-206ENST00000478938 TFAP2EQ6VUC0 442 aa20.57■□□□□ 0.88
SDF4-206ENST00000478938 ZNF605Q86T29 641 aa20.57■□□□□ 0.88
SDF4-206ENST00000478938 C19orf18Q8NEA5 215 aa20.57■□□□□ 0.88
SDF4-206ENST00000478938 MTERF3Q96E29 417 aa20.57■□□□□ 0.88
SDF4-206ENST00000478938 TAPBPLQ9BX59 468 aa20.57■□□□□ 0.88
SDF4-206ENST00000478938 CUEDC1Q9NWM3 386 aaPredicted RBP20.57■□□□□ 0.88
SDF4-206ENST00000478938 KCMF1Q9P0J7 381 aa20.57■□□□□ 0.88
SDF4-206ENST00000478938 GALPQ9UBC7 116 aa20.57■□□□□ 0.88
SDF4-206ENST00000478938 KLF2Q9Y5W3 355 aaPredicted RBP20.57■□□□□ 0.88
SDF4-206ENST00000478938 ORC5O43913 435 aa20.57■□□□□ 0.88
SDF4-206ENST00000478938 TSPAN12O95859 305 aa20.57■□□□□ 0.88
SDF4-206ENST00000478938 GGT2P36268 569 aa20.57■□□□□ 0.88
SDF4-206ENST00000478938 TIAL1Q01085 375 aaKnown RBP eCLIP20.57■□□□□ 0.88
SDF4-206ENST00000478938 PTPRCAPQ14761 206 aa20.57■□□□□ 0.88
SDF4-206ENST00000478938 COL28A1Q2UY09 1125 aa20.57■□□□□ 0.88
SDF4-206ENST00000478938 TRIQKQ629K1 86 aa20.57■□□□□ 0.88
SDF4-206ENST00000478938 RASGRP3Q8IV61 690 aa20.57■□□□□ 0.88
SDF4-206ENST00000478938 ZSWIM3Q96MP5 696 aa20.57■□□□□ 0.88
SDF4-206ENST00000478938 HHATLQ9HCP6 504 aa20.57■□□□□ 0.88
SDF4-206ENST00000478938 PCDHB16Q9NRJ7 776 aa20.57■□□□□ 0.88
SDF4-206ENST00000478938 TAS2R7Q9NYW3 318 aa20.57■□□□□ 0.88
SDF4-206ENST00000478938 CFAP20Q9Y6A4 193 aaKnown RBP20.57■□□□□ 0.88
SDF4-206ENST00000478938 MRPL42Q9Y6G3 142 aaKnown RBP20.57■□□□□ 0.88
SDF4-206ENST00000478938 IQCMA0A1B0GVH7 501 aa20.56■□□□□ 0.88
SDF4-206ENST00000478938 FAM25EA8MYX2 175 aa20.56■□□□□ 0.88
SDF4-206ENST00000478938 E9PQ18 207 aa20.56■□□□□ 0.88
SDF4-206ENST00000478938 PSMD3O43242 534 aa20.56■□□□□ 0.88
SDF4-206ENST00000478938 OR1I1O60431 355 aa20.56■□□□□ 0.88
SDF4-206ENST00000478938 S1PR4O95977 384 aa20.56■□□□□ 0.88
SDF4-206ENST00000478938 SMSP52788 366 aa20.56■□□□□ 0.88
SDF4-206ENST00000478938 RAB14P61106 215 aa20.56■□□□□ 0.88
SDF4-206ENST00000478938 INO80DQ53TQ3 878 aaPredicted RBP20.56■□□□□ 0.88
SDF4-206ENST00000478938 RUNDC3AQ59EK9 446 aa20.56■□□□□ 0.88
SDF4-206ENST00000478938 MLIPQ5VWP3 458 aa20.56■□□□□ 0.88
SDF4-206ENST00000478938 TMEM151BQ8IW70 566 aa20.56■□□□□ 0.88
SDF4-206ENST00000478938 DUSP18Q8NEJ0 188 aa20.56■□□□□ 0.88
SDF4-206ENST00000478938 WDR36Q8NI36 951 aaKnown RBP20.56■□□□□ 0.88
SDF4-206ENST00000478938 WBP1Q96G27 269 aa20.56■□□□□ 0.88
SDF4-206ENST00000478938 MARVELD1Q9BSK0 173 aa20.56■□□□□ 0.88
SDF4-206ENST00000478938 MS4A12Q9NXJ0 267 aa20.56■□□□□ 0.88
SDF4-206ENST00000478938 ZNF226Q9NYT6 803 aa20.56■□□□□ 0.88
SDF4-206ENST00000478938 RNF112Q9ULX5 631 aa20.56■□□□□ 0.88
SDF4-206ENST00000478938 SLC6A14Q9UN76 642 aa20.56■□□□□ 0.88
SDF4-206ENST00000478938 PIPSLA2A3N6 862 aa20.56■□□□□ 0.88
SDF4-206ENST00000478938 GTPBP1O00178 669 aaKnown RBP20.56■□□□□ 0.88
SDF4-206ENST00000478938 LYRM1O43325 122 aa20.56■□□□□ 0.88
SDF4-206ENST00000478938 CHP2O43745 196 aa20.56■□□□□ 0.88
SDF4-206ENST00000478938 C2orf80Q0P641 193 aa20.56■□□□□ 0.88
SDF4-206ENST00000478938 NR6A1Q15406 480 aa20.56■□□□□ 0.88
SDF4-206ENST00000478938 MZT2BQ6NZ67 158 aa20.56■□□□□ 0.88
SDF4-206ENST00000478938 ZC3HAV1LQ96H79 300 aaKnown RBP20.56■□□□□ 0.88
SDF4-206ENST00000478938 RADILQ96JH8 1075 aa20.56■□□□□ 0.88
SDF4-206ENST00000478938 CD244Q9BZW8 370 aa20.56■□□□□ 0.88
SDF4-206ENST00000478938 ASB1Q9Y576 335 aa20.56■□□□□ 0.88
SDF4-206ENST00000478938 FKBP7Q9Y680 259 aa20.56■□□□□ 0.88
SDF4-206ENST00000478938 SLC43A1O75387 559 aa20.55■□□□□ 0.88
SDF4-206ENST00000478938 RPS17P08708 135 aaKnown RBP20.55■□□□□ 0.88
SDF4-206ENST00000478938 SLC2A2P11168 524 aaPredicted RBP20.55■□□□□ 0.88
SDF4-206ENST00000478938 NPR3P17342 541 aa20.55■□□□□ 0.88
SDF4-206ENST00000478938 ADRA1BP35368 520 aa20.55■□□□□ 0.88
SDF4-206ENST00000478938 ZNF81P51508 661 aa20.55■□□□□ 0.88
SDF4-206ENST00000478938 CLCN3P51790 818 aa20.55■□□□□ 0.88
SDF4-206ENST00000478938 HNRNPA0Q13151 305 aaKnown RBP20.55■□□□□ 0.88
SDF4-206ENST00000478938 RFTN2Q52LD8 501 aaPredicted RBP20.55■□□□□ 0.88
SDF4-206ENST00000478938 SPANXN4Q5MJ08 99 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms