RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 ABI3Q9P2A4 366 aa11.14□□□□□ -0.63
CPSF7-211ENST00000477890 SUCOQ9UBS9 1254 aaKnown RBP11.14□□□□□ -0.63
CPSF7-211ENST00000477890 SEC14L3Q9UDX4 400 aa11.14□□□□□ -0.63
CPSF7-211ENST00000477890 SCN3AQ9NY46 2000 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 TCRBV7S3A2A0A539 114 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 E7ENX8 843 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 CCL21O00585 134 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 AVILO75366 819 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 STATHP02808 62 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 F7P08709 466 aaPredicted RBP11.13□□□□□ -0.63
CPSF7-211ENST00000477890 MYBL2P10244 700 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 PAMP19021 973 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 TPSB2P20231 275 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 ELAVL4P26378 380 aaKnown RBP11.13□□□□□ -0.63
CPSF7-211ENST00000477890 MST1P26927 711 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 GRNP28799 593 aaKnown RBP11.13□□□□□ -0.63
CPSF7-211ENST00000477890 CLCN7P51798 805 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 EFNA3P52797 238 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 ABATP80404 500 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 CDK16Q00536 496 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 TAP2Q03519 686 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 ZNF33BQ06732 778 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 ART3Q13508 389 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 CUL1Q13616 776 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 FAM53BQ14153 422 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 TPSAB1Q15661 275 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 TTLL9Q3SXZ7 439 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 THEMIS2Q5TEJ8 643 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 MFSD4BQ5TF39 518 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 NEPROQ6NW34 567 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 CASC4Q6P4E1 433 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 NEK10Q6ZWH5 1172 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 CILP2Q8IUL8 1156 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 DNAJB8Q8NHS0 232 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 ITLN2Q8WWU7 325 aaPredicted RBP11.13□□□□□ -0.63
CPSF7-211ENST00000477890 METTL21AQ8WXB1 218 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 CCDC120Q96HB5 630 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 IMMP1LQ96LU5 166 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 SLC30A3Q99726 388 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 TEKT2Q9UIF3 430 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 SH3BGRL2Q9UJC5 107 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 VPS9D1Q9Y2B5 631 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 ZKSCAN5Q9Y2L8 839 aa11.13□□□□□ -0.63
CPSF7-211ENST00000477890 IGHV3-20A0A0C4DH32 117 aa11.12□□□□□ -0.63
CPSF7-211ENST00000477890 CTAGE9A4FU28 777 aa11.12□□□□□ -0.63
CPSF7-211ENST00000477890 A8MUI8 341 aa11.12□□□□□ -0.63
CPSF7-211ENST00000477890 H7BY64 318 aa11.12□□□□□ -0.63
CPSF7-211ENST00000477890 PRAMEF2O60811 474 aa11.12□□□□□ -0.63
CPSF7-211ENST00000477890 SEC24DO94855 1032 aaPredicted RBP11.12□□□□□ -0.63
CPSF7-211ENST00000477890 FGGP02679 453 aa11.12□□□□□ -0.63
CPSF7-211ENST00000477890 CA7P43166 264 aa11.12□□□□□ -0.63
CPSF7-211ENST00000477890 SNRPNP63162 240 aaKnown RBP11.12□□□□□ -0.63
CPSF7-211ENST00000477890 PMP22Q01453 160 aa11.12□□□□□ -0.63
CPSF7-211ENST00000477890 RELAQ04206 551 aa11.12□□□□□ -0.63
CPSF7-211ENST00000477890 RBPJQ06330 500 aa11.12□□□□□ -0.63
CPSF7-211ENST00000477890 TRIP13Q15645 432 aaPredicted RBP11.12□□□□□ -0.63
CPSF7-211ENST00000477890 LONRF1Q17RB8 773 aa11.12□□□□□ -0.63
CPSF7-211ENST00000477890 BTBD16Q32M84 506 aa11.12□□□□□ -0.63
CPSF7-211ENST00000477890 MINDY4Q4G0A6 757 aa11.12□□□□□ -0.63
CPSF7-211ENST00000477890 ZNF470Q6ECI4 717 aa11.12□□□□□ -0.63
CPSF7-211ENST00000477890 LANCL3Q6ZV70 420 aa11.12□□□□□ -0.63
CPSF7-211ENST00000477890 MRGPRGQ86SM5 289 aa11.12□□□□□ -0.63
CPSF7-211ENST00000477890 SPNS2Q8IVW8 549 aa11.12□□□□□ -0.63
CPSF7-211ENST00000477890 LRRC56Q8IYG6 542 aaPredicted RBP11.12□□□□□ -0.63
CPSF7-211ENST00000477890 OR9A4Q8NGU2 314 aa11.12□□□□□ -0.63
CPSF7-211ENST00000477890 GIMAP7Q8NHV1 300 aa11.12□□□□□ -0.63
CPSF7-211ENST00000477890 MAIP1Q8WWC4 291 aa11.12□□□□□ -0.63
CPSF7-211ENST00000477890 PRAP1Q96NZ9 151 aa11.12□□□□□ -0.63
CPSF7-211ENST00000477890 PHF12Q96QT6 1004 aa11.12□□□□□ -0.63
CPSF7-211ENST00000477890 EBNA1BP2Q99848 306 aaKnown RBP11.12□□□□□ -0.63
CPSF7-211ENST00000477890 VN1R1Q9GZP7 353 aa11.12□□□□□ -0.63
CPSF7-211ENST00000477890 CCDC68Q9H2F9 335 aa11.12□□□□□ -0.63
CPSF7-211ENST00000477890 INTS10Q9NVR2 710 aaKnown RBP11.12□□□□□ -0.63
CPSF7-211ENST00000477890 SAMD15Q9P1V8 674 aa11.12□□□□□ -0.63
CPSF7-211ENST00000477890 KLF2Q9Y5W3 355 aaPredicted RBP11.12□□□□□ -0.63
CPSF7-211ENST00000477890 PCNX1Q96RV3 2341 aa11.11□□□□□ -0.63
CPSF7-211ENST00000477890 H0YIG0 161 aa11.11□□□□□ -0.63
CPSF7-211ENST00000477890 ZBTB14O43829 449 aa11.11□□□□□ -0.63
CPSF7-211ENST00000477890 SNRPB2P08579 225 aaKnown RBP11.11□□□□□ -0.63
CPSF7-211ENST00000477890 MPC1LP0DKB6 136 aa11.11□□□□□ -0.63
CPSF7-211ENST00000477890 IMPA1P29218 277 aa11.11□□□□□ -0.63
CPSF7-211ENST00000477890 VPS41P49754 854 aa11.11□□□□□ -0.63
CPSF7-211ENST00000477890 SARNPP82979 210 aaKnown RBP11.11□□□□□ -0.63
CPSF7-211ENST00000477890 THOC5Q13769 683 aaKnown RBP11.11□□□□□ -0.63
CPSF7-211ENST00000477890 DHX34Q14147 1143 aaKnown RBP11.11□□□□□ -0.63
CPSF7-211ENST00000477890 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.11□□□□□ -0.63
CPSF7-211ENST00000477890 ZNF766Q5HY98 468 aa11.11□□□□□ -0.63
CPSF7-211ENST00000477890 FCRLBQ6BAA4 426 aa11.11□□□□□ -0.63
CPSF7-211ENST00000477890 MTFR2Q6P444 385 aa11.11□□□□□ -0.63
CPSF7-211ENST00000477890 PRSS41Q7RTY9 318 aa11.11□□□□□ -0.63
CPSF7-211ENST00000477890 CPEB2Q7Z5Q1 589 aaKnown RBP11.11□□□□□ -0.63
CPSF7-211ENST00000477890 DENND6AQ8IWF6 608 aa11.11□□□□□ -0.63
CPSF7-211ENST00000477890 SHISA5Q8N114 240 aa11.11□□□□□ -0.63
CPSF7-211ENST00000477890 ZNF808Q8N4W9 903 aaPredicted RBP11.11□□□□□ -0.63
CPSF7-211ENST00000477890 PRELID2Q8N945 189 aa11.11□□□□□ -0.63
CPSF7-211ENST00000477890 FBXO15Q8NCQ5 510 aaPredicted RBP11.11□□□□□ -0.63
CPSF7-211ENST00000477890 OR51Q1Q8NH59 317 aa11.11□□□□□ -0.63
CPSF7-211ENST00000477890 MCOLN3Q8TDD5 553 aa11.11□□□□□ -0.63
CPSF7-211ENST00000477890 ASB11Q8WXH4 323 aa11.11□□□□□ -0.63
CPSF7-211ENST00000477890 ZNF669Q96BR6 464 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms