RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 SLC29A3Q9BZD2 475 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 C20orf96Q9NUD7 363 aaPredicted RBP6.66□□□□□ -1.34
HDAC3-207ENST00000475549 ABCF3Q9NUQ8 709 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 PTGFRNQ9P2B2 879 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 PCYOX1Q9UHG3 505 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 FBXO5Q9UKT4 447 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 PDE10AQ9Y233 779 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 JRKLQ9Y4A0 524 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 FAM169AQ9Y6X4 670 aa6.66□□□□□ -1.34
HDAC3-207ENST00000475549 SPTBN1Q01082 2364 aaKnown RBP6.66□□□□□ -1.34
HDAC3-207ENST00000475549 KCNE1BA0A087WTH5 132 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 NSG1A0A0A6YYJ2 146 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 CTAGE15A4D2H0 777 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 PHF2O75151 1096 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 TSPAN12O95859 305 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 WDPCPO95876 746 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 SYF2O95926 243 aaKnown RBP6.65□□□□□ -1.34
HDAC3-207ENST00000475549 AHSGP02765 367 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 CATP04040 527 aaKnown RBP6.65□□□□□ -1.34
HDAC3-207ENST00000475549 MPC1LP0DKB6 136 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 ERVK-10P10266 1014 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 ITGAMP11215 1152 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 EDN3P14138 238 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 NPPBP16860 134 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 PAMP19021 973 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 IVDP26440 423 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 MST1P26927 711 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 HSD17B2P37059 387 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 BCL6P41182 706 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 TNFSF10P50591 281 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 TDGF1P3P51864 188 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 CDKN2DP55273 166 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 CSNK1G2P78368 415 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 ABATP80404 500 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 SARNPP82979 210 aaKnown RBP6.65□□□□□ -1.34
HDAC3-207ENST00000475549 THOC5Q13769 683 aaKnown RBP6.65□□□□□ -1.34
HDAC3-207ENST00000475549 FAM53BQ14153 422 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 PCOLCEQ15113 449 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 LONRF1Q17RB8 773 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 RNASEH2BQ5TBB1 312 aaKnown RBP6.65□□□□□ -1.34
HDAC3-207ENST00000475549 GARNL3Q5VVW2 1013 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 TMEM214Q6NUQ4 689 aaKnown RBP6.65□□□□□ -1.34
HDAC3-207ENST00000475549 RPUSD3Q6P087 351 aaKnown RBP6.65□□□□□ -1.34
HDAC3-207ENST00000475549 PAQR3Q6TCH7 311 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 CTAGE6Q86UF2 777 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 PDSS2Q86YH6 399 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 KBTBD2Q8IY47 623 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 SIRT6Q8N6T7 355 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 KCT2Q8NC54 265 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 C2CD4AQ8NCU7 369 aaPredicted RBP6.65□□□□□ -1.34
HDAC3-207ENST00000475549 OR1N1Q8NGS0 311 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 HAS2Q92819 552 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 MOCOSQ96EN8 888 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 MVB12AQ96EY5 273 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 C5orf34Q96MH7 638 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 PWWP2AQ96N64 755 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 CYTH2Q99418 400 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 WDR83Q9BRX9 315 aaKnown RBP6.65□□□□□ -1.34
HDAC3-207ENST00000475549 AARSD1Q9BTE6 412 aaKnown RBP6.65□□□□□ -1.34
HDAC3-207ENST00000475549 YIPF2Q9BWQ6 316 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 VN1R1Q9GZP7 353 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 DRC3Q9H069 523 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 ZNF700Q9H0M5 742 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 ATG10Q9H0Y0 220 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 XAB2Q9HCS7 855 aaKnown RBP6.65□□□□□ -1.34
HDAC3-207ENST00000475549 MKKSQ9NPJ1 570 aaPredicted RBP6.65□□□□□ -1.34
HDAC3-207ENST00000475549 FAM114A2Q9NRY5 505 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 AGPAT4Q9NRZ5 378 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 IARS2Q9NSE4 1012 aaKnown RBP6.65□□□□□ -1.34
HDAC3-207ENST00000475549 TMEM184CQ9NVA4 438 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 SAMD15Q9P1V8 674 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 SLC17A6Q9P2U8 582 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 IKZF3Q9UKT9 509 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 MKL2Q9ULH7 1088 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 CDC14AQ9UNH5 594 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 OSGIN2Q9Y236 505 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 VPS9D1Q9Y2B5 631 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 MAD1L1Q9Y6D9 718 aa6.65□□□□□ -1.34
HDAC3-207ENST00000475549 POLEQ07864 2286 aa6.65□□□□□ -1.35
HDAC3-207ENST00000475549 PIKFYVEQ9Y2I7 2098 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 HIVEP3Q5T1R4 2406 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 FEZF1A0PJY2 475 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 GOLGA6L6A8MZA4 724 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 SGK494L7N484 410 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 MAP2K7O14733 419 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 PCDH17O14917 1159 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 PFDN6O15212 129 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 TP73O15350 636 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 ZBTB14O43829 449 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 MAN1A2O60476 641 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 VPS26AO75436 327 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 HEXBP07686 556 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 STSP08842 583 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 ENO3P13929 434 aaPredicted RBP6.64□□□□□ -1.35
HDAC3-207ENST00000475549 PRF1P14222 555 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 ST13P50502 369 aaKnown RBP6.64□□□□□ -1.35
HDAC3-207ENST00000475549 KCNK10P57789 538 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 TBPL1P62380 186 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 ARG2P78540 354 aa6.64□□□□□ -1.35
HDAC3-207ENST00000475549 CRYMQ14894 314 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms