RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 FBXL19-AS1Q494R0 122 aa9.6□□□□□ -0.87
CDHR3-209ENST00000472116 CCDC38Q502W7 563 aa9.6□□□□□ -0.87
CDHR3-209ENST00000472116 WLSQ5T9L3 541 aa9.6□□□□□ -0.87
CDHR3-209ENST00000472116 ZNF468Q5VIY5 522 aaPredicted RBP9.6□□□□□ -0.87
CDHR3-209ENST00000472116 GARNL3Q5VVW2 1013 aa9.6□□□□□ -0.87
CDHR3-209ENST00000472116 SNX20Q7Z614 316 aa9.6□□□□□ -0.87
CDHR3-209ENST00000472116 OR4N4Q8N0Y3 316 aa9.6□□□□□ -0.87
CDHR3-209ENST00000472116 AMER3Q8N944 861 aa9.6□□□□□ -0.87
CDHR3-209ENST00000472116 MLKLQ8NB16 471 aa9.6□□□□□ -0.87
CDHR3-209ENST00000472116 OR4K2Q8NGD2 314 aa9.6□□□□□ -0.87
CDHR3-209ENST00000472116 TADA1Q96BN2 335 aa9.6□□□□□ -0.87
CDHR3-209ENST00000472116 SH3GL2Q99962 352 aa9.6□□□□□ -0.87
CDHR3-209ENST00000472116 C19orf24Q9BVV8 132 aa9.6□□□□□ -0.87
CDHR3-209ENST00000472116 RAB11FIP5Q9BXF6 653 aa9.6□□□□□ -0.87
CDHR3-209ENST00000472116 FSD1LQ9BXM9 530 aa9.6□□□□□ -0.87
CDHR3-209ENST00000472116 VN1R1Q9GZP7 353 aa9.6□□□□□ -0.87
CDHR3-209ENST00000472116 SPTLC3Q9NUV7 552 aa9.6□□□□□ -0.87
CDHR3-209ENST00000472116 ZDHHC3Q9NYG2 299 aa9.6□□□□□ -0.87
CDHR3-209ENST00000472116 TAB2Q9NYJ8 693 aa9.6□□□□□ -0.87
CDHR3-209ENST00000472116 IP6K2Q9UHH9 426 aa9.6□□□□□ -0.87
CDHR3-209ENST00000472116 ADGRE2Q9UHX3 823 aa9.6□□□□□ -0.87
CDHR3-209ENST00000472116 HEY1Q9Y5J3 304 aa9.6□□□□□ -0.87
CDHR3-209ENST00000472116 DUSP10Q9Y6W6 482 aa9.6□□□□□ -0.87
CDHR3-209ENST00000472116 CUBNO60494 3623 aa9.6□□□□□ -0.87
CDHR3-209ENST00000472116 A0A0A6YYC8 382 aaPredicted RBP9.59□□□□□ -0.87
CDHR3-209ENST00000472116 LOC285095A0A1B0GVY8 99 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 I3L1I5 382 aaPredicted RBP9.59□□□□□ -0.87
CDHR3-209ENST00000472116 TXNDC9O14530 226 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 EPHB6O15197 1021 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 FTLP02792 175 aaPredicted RBP9.59□□□□□ -0.87
CDHR3-209ENST00000472116 TPBGLP0DKB5 382 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 EEF1GP26641 437 aaKnown RBP9.59□□□□□ -0.87
CDHR3-209ENST00000472116 CHRNA4P43681 627 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 EFNA3P52797 238 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 GPR85P60893 370 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 PPIAP62937 165 aaKnown RBP9.59□□□□□ -0.87
CDHR3-209ENST00000472116 MAT1AQ00266 395 aaKnown RBP9.59□□□□□ -0.87
CDHR3-209ENST00000472116 SORDQ00796 357 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 SLC25A11Q02978 314 aaKnown RBP9.59□□□□□ -0.87
CDHR3-209ENST00000472116 PTPRCAPQ14761 206 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 PDK1Q15118 436 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 SLC1A5Q15758 541 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 NDUFA9Q16795 377 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 KRTAP24-1Q3LI83 254 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 GPR33Q49SQ1 333 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 DNAJC21Q5F1R6 531 aaKnown RBP9.59□□□□□ -0.87
CDHR3-209ENST00000472116 C10orf62Q5T681 223 aaPredicted RBP9.59□□□□□ -0.87
CDHR3-209ENST00000472116 TTC23LQ6PF05 361 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 RGS9BPQ6ZS82 235 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 RNF44Q7L0R7 432 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 ANKRD37Q7Z713 158 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 SLC22A16Q86VW1 577 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 CYP4Z2PQ8N1L4 340 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 TMEM156Q8N614 296 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 CSNK1A1LQ8N752 337 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 LINC01555Q8NAE3 123 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 IPMKQ8NFU5 416 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 OR2L8Q8NGY9 312 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 LINC01560Q8TB33 94 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 FAM71BQ8TC56 605 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 MCOLN3Q8TDD5 553 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.59□□□□□ -0.87
CDHR3-209ENST00000472116 SMPDL3BQ92485 455 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 RERGQ96A58 199 aaPredicted RBP9.59□□□□□ -0.87
CDHR3-209ENST00000472116 SARAFQ96BY9 339 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 SPATA13Q96N96 652 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 FAM96AQ9H5X1 160 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 EXO5Q9H790 373 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 TRIM45Q9H8W5 580 aaPredicted RBP9.59□□□□□ -0.87
CDHR3-209ENST00000472116 TIMMDC1Q9NPL8 285 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 YAE1D1Q9NRH1 226 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 RUVBL1Q9Y265 456 aaKnown RBP9.59□□□□□ -0.87
CDHR3-209ENST00000472116 ARL5AQ9Y689 179 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 CR1P17927 2039 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 USF3Q68DE3 2245 aa9.59□□□□□ -0.87
CDHR3-209ENST00000472116 FREM3P0C091 2139 aa9.58□□□□□ -0.88
CDHR3-209ENST00000472116 MBD3L4A6NDZ8 208 aaPredicted RBP9.58□□□□□ -0.88
CDHR3-209ENST00000472116 MBD3L5A6NJ08 208 aaPredicted RBP9.58□□□□□ -0.88
CDHR3-209ENST00000472116 F8W8V4 182 aa9.58□□□□□ -0.88
CDHR3-209ENST00000472116 PHF2O75151 1096 aa9.58□□□□□ -0.88
CDHR3-209ENST00000472116 AP2A2O94973 939 aa9.58□□□□□ -0.88
CDHR3-209ENST00000472116 STATHP02808 62 aa9.58□□□□□ -0.88
CDHR3-209ENST00000472116 TUBB4AP04350 444 aa9.58□□□□□ -0.88
CDHR3-209ENST00000472116 SLC10A2Q12908 348 aaPredicted RBP9.58□□□□□ -0.88
CDHR3-209ENST00000472116 PTK6Q13882 451 aa9.58□□□□□ -0.88
CDHR3-209ENST00000472116 TAF1AQ15573 450 aaPredicted RBP9.58□□□□□ -0.88
CDHR3-209ENST00000472116 PRTGQ2VWP7 1150 aa9.58□□□□□ -0.88
CDHR3-209ENST00000472116 ZNF658BQ4V348 819 aaPredicted RBP9.58□□□□□ -0.88
CDHR3-209ENST00000472116 SFT2D3Q587I9 215 aa9.58□□□□□ -0.88
CDHR3-209ENST00000472116 TCP11X2Q5H9J9 407 aa9.58□□□□□ -0.88
CDHR3-209ENST00000472116 RTL6Q6ICC9 239 aa9.58□□□□□ -0.88
CDHR3-209ENST00000472116 LRRC8BQ6P9F7 803 aa9.58□□□□□ -0.88
CDHR3-209ENST00000472116 DCUN1D3Q8IWE4 304 aa9.58□□□□□ -0.88
CDHR3-209ENST00000472116 RELL2Q8NC24 303 aaPredicted RBP9.58□□□□□ -0.88
CDHR3-209ENST00000472116 MIPEPQ99797 713 aa9.58□□□□□ -0.88
CDHR3-209ENST00000472116 FICDQ9BVA6 458 aa9.58□□□□□ -0.88
CDHR3-209ENST00000472116 LDAHQ9H6V9 325 aa9.58□□□□□ -0.88
CDHR3-209ENST00000472116 ZDHHC9Q9Y397 364 aa9.58□□□□□ -0.88
CDHR3-209ENST00000472116 DYSFO75923 2080 aa9.58□□□□□ -0.88
CDHR3-209ENST00000472116 C5orf60A6NFR6 353 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms