RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 MRPL14Q6P1L8 145 aaKnown RBP13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 AGTRAPQ6RW13 159 aa13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 TTLL10Q6ZVT0 673 aa13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 MRGPREQ86SM8 312 aa13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 CEP97Q8IW35 865 aa13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 OR4N4Q8N0Y3 316 aa13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 CEP112Q8N8E3 955 aa13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 TTC29Q8NA56 475 aaPredicted RBP13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 MRRFQ96E11 262 aaKnown RBP13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 PDLIM5Q96HC4 596 aaKnown RBP13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 VPS50Q96JG6 964 aa13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 ZFYVE21Q9BQ24 234 aa13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 PLCD4Q9BRC7 762 aa13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 CAB39LQ9H9S4 337 aa13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 GPAMQ9HCL2 828 aa13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 CCDC177Q9NQR7 707 aaPredicted RBP13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 ARL15Q9NXU5 204 aa13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 UTP6Q9NYH9 597 aaKnown RBP13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 MTRF1LQ9UGC7 380 aaKnown RBP13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 KLK4Q9Y5K2 254 aa13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 UTP20O75691 2785 aaKnown RBP13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 IGKV1-8A0A0C4DH67 115 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 BLACEA4D250 179 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 OR2A25A4D2G3 310 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 H7BY64 318 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 CDC7O00311 574 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 AGFG2O95081 481 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 ZNF37AP17032 561 aaPredicted RBP13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 GNLYP22749 145 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 STX2P32856 288 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 SPRP35270 261 aaPredicted RBP13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 GP5P40197 560 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 TBPL1P62380 186 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 POU4F1Q01851 419 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 ILF2Q12905 390 aaKnown RBP13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 GRM7Q14831 915 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 MYBPC3Q14896 1274 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 SLC9A5Q14940 896 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 FAM214AQ32MH5 1076 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 NKAIN1Q4KMZ8 207 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 DCAF10Q5QP82 559 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 GRTP1Q5TC63 336 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 FAM69BQ5VUD6 431 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 SLC6A19Q695T7 634 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 PAQR7Q86WK9 346 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 GALNT16Q8N428 558 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 RBMXL3Q8N7X1 1067 aaKnown RBP13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 SSC4DQ8WTU2 575 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 ANKRD49Q8WVL7 239 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 FKBP10Q96AY3 582 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 TSPAN17Q96FV3 270 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 PRAP1Q96NZ9 151 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 RBBP8Q99708 897 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 MCMBPQ9BTE3 642 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 UNKQ9C0B0 810 aaKnown RBP13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 WDR54Q9H977 334 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 CUTCQ9NTM9 273 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 IKZF3Q9UKT9 509 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 PTRH2Q9Y3E5 179 aaKnown RBP13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 FER1L5A0AVI2 2057 aa13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 MDC1Q14676 2089 aaKnown RBP13.42□□□□□ -0.26
CCHCR1-211ENST00000467553 NPEPPSL1A6NEC2 478 aa13.41□□□□□ -0.26
CCHCR1-211ENST00000467553 A6NL46 340 aa13.41□□□□□ -0.26
CCHCR1-211ENST00000467553 H0YGG7 62 aa13.41□□□□□ -0.26
CCHCR1-211ENST00000467553 PHGDHO43175 533 aaKnown RBP13.41□□□□□ -0.26
CCHCR1-211ENST00000467553 C1QAP02745 245 aa13.41□□□□□ -0.26
CCHCR1-211ENST00000467553 OTX2P32243 289 aa13.41□□□□□ -0.26
CCHCR1-211ENST00000467553 ARF3P61204 181 aaPredicted RBP13.41□□□□□ -0.26
CCHCR1-211ENST00000467553 PRAMEF13Q5VWM6 474 aa13.41□□□□□ -0.26
CCHCR1-211ENST00000467553 RNF44Q7L0R7 432 aa13.41□□□□□ -0.26
CCHCR1-211ENST00000467553 C17orf64Q86WR6 236 aa13.41□□□□□ -0.26
CCHCR1-211ENST00000467553 PLD3Q8IV08 490 aa13.41□□□□□ -0.26
CCHCR1-211ENST00000467553 IQCKQ8N0W5 287 aa13.41□□□□□ -0.26
CCHCR1-211ENST00000467553 SPATA6LQ8N4H0 392 aa13.41□□□□□ -0.26
CCHCR1-211ENST00000467553 Q8NA96 180 aa13.41□□□□□ -0.26
CCHCR1-211ENST00000467553 PYCR2Q96C36 320 aa13.41□□□□□ -0.26
CCHCR1-211ENST00000467553 PCBD2Q9H0N5 130 aa13.41□□□□□ -0.26
CCHCR1-211ENST00000467553 POPDC3Q9HBV1 291 aa13.41□□□□□ -0.26
CCHCR1-211ENST00000467553 ATP13A2Q9NQ11 1180 aa13.41□□□□□ -0.26
CCHCR1-211ENST00000467553 TMEM184CQ9NVA4 438 aa13.41□□□□□ -0.26
CCHCR1-211ENST00000467553 CTNNAL1Q9UBT7 734 aa13.41□□□□□ -0.26
CCHCR1-211ENST00000467553 B3GNT3Q9Y2A9 372 aa13.41□□□□□ -0.26
CCHCR1-211ENST00000467553 ICE1Q9Y2F5 2266 aa13.4□□□□□ -0.26
CCHCR1-211ENST00000467553 HYKKA2RU49 373 aa13.4□□□□□ -0.26
CCHCR1-211ENST00000467553 AGPSO00116 658 aa13.4□□□□□ -0.26
CCHCR1-211ENST00000467553 HAT1O14929 419 aa13.4□□□□□ -0.26
CCHCR1-211ENST00000467553 DSCR3O14972 297 aa13.4□□□□□ -0.26
CCHCR1-211ENST00000467553 ENO2P09104 434 aaPredicted RBP13.4□□□□□ -0.26
CCHCR1-211ENST00000467553 CCDC166P0CW27 439 aa13.4□□□□□ -0.26
CCHCR1-211ENST00000467553 STMN1P16949 149 aa13.4□□□□□ -0.26
CCHCR1-211ENST00000467553 GCGRP47871 477 aa13.4□□□□□ -0.26
CCHCR1-211ENST00000467553 UQCRFS1P47985 274 aa13.4□□□□□ -0.26
CCHCR1-211ENST00000467553 AP1S2P56377 157 aa13.4□□□□□ -0.26
CCHCR1-211ENST00000467553 AIMP2Q13155 320 aaKnown RBP13.4□□□□□ -0.26
CCHCR1-211ENST00000467553 EFTUD2Q15029 972 aaKnown RBP eCLIP13.4□□□□□ -0.261e-6■■■■□ 25.7
CCHCR1-211ENST00000467553 ZNF425Q6IV72 752 aa13.4□□□□□ -0.26
CCHCR1-211ENST00000467553 CAPN13Q6MZZ7 669 aaPredicted RBP13.4□□□□□ -0.26
CCHCR1-211ENST00000467553 CEP128Q6ZU80 1094 aa13.4□□□□□ -0.26
CCHCR1-211ENST00000467553 ZADH2Q8N4Q0 377 aa13.4□□□□□ -0.26
CCHCR1-211ENST00000467553 METTL27Q8N6F8 245 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms