RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 MID2Q9UJV3 735 aa18.94■□□□□ 0.62
COL9A3-204ENST00000463487 PADI1Q9ULC6 663 aa18.94■□□□□ 0.62
COL9A3-204ENST00000463487 HEATR5BQ9P2D3 2071 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 GOLGA6L10A6NI86 522 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 H0YGG7 62 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 STX16-NPEPL1H3BU86 382 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 STX16O14662 325 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 SLC35G6P0C7Q6 338 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 MYZAPP0CAP1 466 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 C1GALT1C1LP0DN25 315 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 CRHR1P34998 444 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 EMP3P54852 163 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 UCNP55089 124 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 ARF3P61204 181 aaPredicted RBP18.93■□□□□ 0.62
COL9A3-204ENST00000463487 ZNF844Q08AG5 666 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 CLN3Q13286 438 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 LAPTM5Q13571 262 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 PCBP2Q15366 365 aaKnown RBP eCLIP18.93■□□□□ 0.626e-8■■■■□ 26.1
COL9A3-204ENST00000463487 HIST2H2ACQ16777 129 aaPredicted RBP18.93■□□□□ 0.62
COL9A3-204ENST00000463487 NDUFA9Q16795 377 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 FBXO48Q5FWF7 155 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 PAGE2BQ5JRK9 111 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 MANEAQ5SRI9 462 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 CATSPEREQ5SY80 951 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 CEP85LQ5SZL2 805 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 ATG9BQ674R7 924 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 HIST2H2AA3Q6FI13 130 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 FRMPD2BQ6IN97 320 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 RHBDD2Q6NTF9 364 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 TRABD2AQ86V40 505 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 SLC22A9Q8IVM8 553 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 SRRM1Q8IYB3 904 aaKnown RBP18.93■□□□□ 0.62
COL9A3-204ENST00000463487 PTGR2Q8N8N7 351 aaPredicted RBP18.93■□□□□ 0.62
COL9A3-204ENST00000463487 CAMKVQ8NCB2 501 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 TTLQ8NG68 377 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 CCDC126Q96EE4 140 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 PHF21BQ96EK2 531 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 OR2A5Q96R48 311 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 EFCAB11Q9BUY7 163 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 SPRY4Q9C004 299 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 SPRTNQ9H040 489 aaPredicted RBP18.93■□□□□ 0.62
COL9A3-204ENST00000463487 STMN4Q9H169 189 aaPredicted RBP18.93■□□□□ 0.62
COL9A3-204ENST00000463487 TMEM216Q9P0N5 145 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 ZMIZ1Q9ULJ6 1067 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 SH2B3Q9UQQ2 575 aa18.93■□□□□ 0.62
COL9A3-204ENST00000463487 ACACAQ13085 2346 aa18.92■□□□□ 0.62
COL9A3-204ENST00000463487 SDK2Q58EX2 2172 aa18.92■□□□□ 0.62
COL9A3-204ENST00000463487 FITM1A5D6W6 292 aa18.92■□□□□ 0.62
COL9A3-204ENST00000463487 HCRTR1O43613 425 aa18.92■□□□□ 0.62
COL9A3-204ENST00000463487 OR1F1O43749 312 aa18.92■□□□□ 0.62
COL9A3-204ENST00000463487 NRP2O60462 931 aa18.92■□□□□ 0.62
COL9A3-204ENST00000463487 PIM1P11309 404 aaPredicted RBP18.92■□□□□ 0.62
COL9A3-204ENST00000463487 GSTM2P28161 218 aa18.92■□□□□ 0.62
COL9A3-204ENST00000463487 AGTR2P50052 363 aa18.92■□□□□ 0.62
COL9A3-204ENST00000463487 REEP5Q00765 189 aa18.92■□□□□ 0.62
COL9A3-204ENST00000463487 MUM1Q2TAK8 710 aa18.92■□□□□ 0.62
COL9A3-204ENST00000463487 XKR6Q5GH73 641 aa18.92■□□□□ 0.62
COL9A3-204ENST00000463487 BEND6Q5SZJ8 279 aaPredicted RBP18.92■□□□□ 0.62
COL9A3-204ENST00000463487 GARNL3Q5VVW2 1013 aa18.92■□□□□ 0.62
COL9A3-204ENST00000463487 SLCO4C1Q6ZQN7 724 aa18.92■□□□□ 0.62
COL9A3-204ENST00000463487 IQCKQ8N0W5 287 aa18.92■□□□□ 0.62
COL9A3-204ENST00000463487 TEX9Q8N6V9 391 aa18.92■□□□□ 0.62
COL9A3-204ENST00000463487 NKD1Q969G9 470 aa18.92■□□□□ 0.62
COL9A3-204ENST00000463487 UBE2E3Q969T4 207 aa18.92■□□□□ 0.62
COL9A3-204ENST00000463487 ESAMQ96AP7 390 aa18.92■□□□□ 0.62
COL9A3-204ENST00000463487 PTCD3Q96EY7 689 aaKnown RBP18.92■□□□□ 0.62
COL9A3-204ENST00000463487 SARGQ9BW04 601 aa18.92■□□□□ 0.62
COL9A3-204ENST00000463487 MKS1Q9NXB0 559 aa18.92■□□□□ 0.62
COL9A3-204ENST00000463487 AKAP13Q12802 2813 aa18.92■□□□□ 0.62
COL9A3-204ENST00000463487 A0A087WV48 116 aa18.91■□□□□ 0.62
COL9A3-204ENST00000463487 LOC105369274A0A096LPK9 316 aa18.91■□□□□ 0.62
COL9A3-204ENST00000463487 LOC102723532A0A0G2JNH3 316 aa18.91■□□□□ 0.62
COL9A3-204ENST00000463487 A0A1B0GX78 115 aa18.91■□□□□ 0.62
COL9A3-204ENST00000463487 FEZF1A0PJY2 475 aa18.91■□□□□ 0.62
COL9A3-204ENST00000463487 HYKKA2RU49 373 aa18.91■□□□□ 0.62
COL9A3-204ENST00000463487 C9J4A7 227 aa18.91■□□□□ 0.62
COL9A3-204ENST00000463487 H3BMH7 237 aa18.91■□□□□ 0.62
COL9A3-204ENST00000463487 MEN1O00255 615 aa18.91■□□□□ 0.62
COL9A3-204ENST00000463487 ATP5F1P24539 256 aaPredicted RBP18.91■□□□□ 0.62
COL9A3-204ENST00000463487 EEF1DP29692 281 aaKnown RBP18.91■□□□□ 0.62
COL9A3-204ENST00000463487 HPDP32754 393 aaPredicted RBP18.91■□□□□ 0.62
COL9A3-204ENST00000463487 AHRP35869 848 aa18.91■□□□□ 0.62
COL9A3-204ENST00000463487 STAT5AP42229 794 aa18.91■□□□□ 0.62
COL9A3-204ENST00000463487 NFKB2Q00653 900 aa18.91■□□□□ 0.62
COL9A3-204ENST00000463487 IRF8Q02556 426 aa18.91■□□□□ 0.62
COL9A3-204ENST00000463487 RGS1Q08116 209 aa18.91■□□□□ 0.62
COL9A3-204ENST00000463487 ST3GAL2Q16842 350 aa18.91■□□□□ 0.62
COL9A3-204ENST00000463487 ASPGQ86U10 573 aa18.91■□□□□ 0.62
COL9A3-204ENST00000463487 PLD3Q8IV08 490 aa18.91■□□□□ 0.62
COL9A3-204ENST00000463487 OR4N4Q8N0Y3 316 aa18.91■□□□□ 0.62
COL9A3-204ENST00000463487 C4orf33Q8N1A6 199 aa18.91■□□□□ 0.62
COL9A3-204ENST00000463487 CCDC63Q8NA47 563 aa18.91■□□□□ 0.62
COL9A3-204ENST00000463487 MFSD9Q8NBP5 474 aa18.91■□□□□ 0.62
COL9A3-204ENST00000463487 TRPV3Q8NET8 790 aa18.91■□□□□ 0.62
COL9A3-204ENST00000463487 RDH11Q8TC12 318 aa18.91■□□□□ 0.62
COL9A3-204ENST00000463487 MR1Q95460 341 aa18.91■□□□□ 0.62
COL9A3-204ENST00000463487 APOPT1Q96IL0 206 aa18.91■□□□□ 0.62
COL9A3-204ENST00000463487 SEC16BQ96JE7 1060 aa18.91■□□□□ 0.62
COL9A3-204ENST00000463487 ZIM3Q96PE6 472 aa18.91■□□□□ 0.62
COL9A3-204ENST00000463487 FAM117AQ9C073 453 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms