RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 FAM45BPQ6NSW5 357 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 TRMT10BQ6PF06 316 aaKnown RBP12.13□□□□□ -0.47
SGCE-203ENST00000425444 PAQR3Q6TCH7 311 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 SPNS3Q6ZMD2 512 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 CYHR1Q6ZMK1 362 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 MED25Q71SY5 747 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 GALNT7Q86SF2 657 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 MRGPREQ86SM8 312 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 C17orf53Q8N3J3 647 aaPredicted RBP12.13□□□□□ -0.47
SGCE-203ENST00000425444 BBOF1Q8ND07 529 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 FBXO36Q8NEA4 188 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 FAM45AQ8TCE6 357 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 MCOLN3Q8TDD5 553 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 RERGQ96A58 199 aaPredicted RBP12.13□□□□□ -0.47
SGCE-203ENST00000425444 FKBP10Q96AY3 582 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 LINGO1Q96FE5 620 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 CABS1Q96KC9 395 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 FER1L6-AS2Q96M78 137 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 ZNF285Q96NJ3 590 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 IP6K3Q96PC2 410 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 PLCD4Q9BRC7 762 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 WDR83Q9BRX9 315 aaKnown RBP12.13□□□□□ -0.47
SGCE-203ENST00000425444 DPH5Q9H2P9 285 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 GPR83Q9NYM4 423 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 COPG2Q9UBF2 871 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 CORO1CQ9ULV4 474 aaPredicted RBP12.13□□□□□ -0.47
SGCE-203ENST00000425444 OSGIN2Q9Y236 505 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 TEX264Q9Y6I9 313 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 MAU2Q9Y6X3 613 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 FER1L5A0AVI2 2057 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 ZNF469Q96JG9 3925 aaPredicted RBP12.12□□□□□ -0.47
SGCE-203ENST00000425444 SEC16AO15027 2179 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 LOC105369274A0A096LPK9 316 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 LOC102723532A0A0G2JNH3 316 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 HYKKA2RU49 373 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 FAM187AA6NFU0 413 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 CNOT3O75175 753 aaKnown RBP12.12□□□□□ -0.47
SGCE-203ENST00000425444 SNRPB2P08579 225 aaKnown RBP12.12□□□□□ -0.47
SGCE-203ENST00000425444 HIST1H2AGP0C0S8 130 aaPredicted RBP12.12□□□□□ -0.47
SGCE-203ENST00000425444 HIST1H2ADP20671 130 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 ITGAXP20702 1163 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 PTGER4P35408 488 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 OR1D4P47884 311 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 TBPL1P62380 186 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 ABATP80404 500 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 C2orf54Q08AI8 447 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 RAPSNQ13702 412 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 FASTKD3Q14CZ7 662 aaKnown RBP12.12□□□□□ -0.47
SGCE-203ENST00000425444 MUM1Q2TAK8 710 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 HECTD2Q5U5R9 776 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 PRAMEF13Q5VWM6 474 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 STEAP4Q687X5 459 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 SYT10Q6XYQ8 523 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 CAPN12Q6ZSI9 719 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 OVCH1Q7RTY7 1134 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 MAATS1Q7Z4T9 603 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 ZBED8Q8IZ13 594 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 OR4N4Q8N0Y3 316 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 CSNK1A1LQ8N752 337 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 CLEC1AQ8NC01 280 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 SPATA4Q8NEY3 305 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.12□□□□□ -0.47
SGCE-203ENST00000425444 ALKBH8Q96BT7 664 aaKnown RBP12.12□□□□□ -0.47
SGCE-203ENST00000425444 PTERQ96BW5 349 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 HIST1H2AHQ96KK5 128 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 CCDC138Q96M89 665 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 HIST1H2AJQ99878 128 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 H2AFJQ9BTM1 129 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 PLAC1Q9HBJ0 212 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 SLC22A11Q9NSA0 550 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 STOX2Q9P2F5 926 aaPredicted RBP12.12□□□□□ -0.47
SGCE-203ENST00000425444 CDC23Q9UJX2 597 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 NXT1Q9UKK6 140 aaKnown RBP12.12□□□□□ -0.47
SGCE-203ENST00000425444 ADAMTS6Q9UKP5 1117 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 B3GNT3Q9Y2A9 372 aa12.12□□□□□ -0.47
SGCE-203ENST00000425444 JMJD1CQ15652 2540 aa12.11□□□□□ -0.47
SGCE-203ENST00000425444 IGKV1-8A0A0C4DH67 115 aa12.11□□□□□ -0.47
SGCE-203ENST00000425444 H0YGG7 62 aa12.11□□□□□ -0.47
SGCE-203ENST00000425444 SLC16A5O15375 505 aa12.11□□□□□ -0.47
SGCE-203ENST00000425444 IGHEP01854 428 aa12.11□□□□□ -0.47
SGCE-203ENST00000425444 ALBP02768 609 aa12.11□□□□□ -0.47
SGCE-203ENST00000425444 UMODP07911 640 aa12.11□□□□□ -0.47
SGCE-203ENST00000425444 EZRP15311 586 aaKnown RBP12.11□□□□□ -0.47
SGCE-203ENST00000425444 SAT1P21673 171 aa12.11□□□□□ -0.47
SGCE-203ENST00000425444 FBLP22087 321 aaKnown RBP12.11□□□□□ -0.47
SGCE-203ENST00000425444 IL2P60568 153 aa12.11□□□□□ -0.47
SGCE-203ENST00000425444 ARF3P61204 181 aaPredicted RBP12.11□□□□□ -0.47
SGCE-203ENST00000425444 TIAL1Q01085 375 aaKnown RBP eCLIP12.11□□□□□ -0.47
SGCE-203ENST00000425444 MGAT5Q09328 741 aa12.11□□□□□ -0.47
SGCE-203ENST00000425444 PRMT9Q6P2P2 845 aa12.11□□□□□ -0.47
SGCE-203ENST00000425444 MBOAT1Q6ZNC8 495 aa12.11□□□□□ -0.47
SGCE-203ENST00000425444 SHISA6Q6ZSJ9 500 aa12.11□□□□□ -0.47
SGCE-203ENST00000425444 COX15Q7KZN9 410 aa12.11□□□□□ -0.47
SGCE-203ENST00000425444 PAQR7Q86WK9 346 aa12.11□□□□□ -0.47
SGCE-203ENST00000425444 MMP21Q8N119 569 aa12.11□□□□□ -0.47
SGCE-203ENST00000425444 DTWD1Q8N5C7 304 aa12.11□□□□□ -0.47
SGCE-203ENST00000425444 ST6GALNAC3Q8NDV1 305 aa12.11□□□□□ -0.47
SGCE-203ENST00000425444 ILKAPQ9H0C8 392 aaPredicted RBP12.11□□□□□ -0.47
SGCE-203ENST00000425444 SOX17Q9H6I2 414 aaPredicted RBP12.11□□□□□ -0.47
SGCE-203ENST00000425444 PARVBQ9HBI1 364 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms