RNA–Protein interactions for RNA: ENST00000423251.1

MCF2L-214, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-214ENST00000423251 NEIL2Q969S2 332 aa17.93■□□□□ 0.46
MCF2L-214ENST00000423251 THAP11Q96EK4 314 aa17.93■□□□□ 0.46
MCF2L-214ENST00000423251 LRFN5Q96NI6 719 aa17.93■□□□□ 0.46
MCF2L-214ENST00000423251 OR2A5Q96R48 311 aa17.93■□□□□ 0.46
MCF2L-214ENST00000423251 MRPL46Q9H2W6 279 aaKnown RBP17.93■□□□□ 0.46
MCF2L-214ENST00000423251 DNAJC11Q9NVH1 559 aa17.93■□□□□ 0.46
MCF2L-214ENST00000423251 LGALS13Q9UHV8 139 aa17.93■□□□□ 0.46
MCF2L-214ENST00000423251 HEATR5BQ9P2D3 2071 aa17.93■□□□□ 0.46
MCF2L-214ENST00000423251 ZNF749O43361 778 aa17.92■□□□□ 0.46
MCF2L-214ENST00000423251 NRP2O60462 931 aa17.92■□□□□ 0.46
MCF2L-214ENST00000423251 RAD1O60671 282 aa17.92■□□□□ 0.46
MCF2L-214ENST00000423251 CPNE3O75131 537 aaKnown RBP17.92■□□□□ 0.46
MCF2L-214ENST00000423251 NTRK1P04629 796 aa17.92■□□□□ 0.46
MCF2L-214ENST00000423251 GFAPP14136 432 aa17.92■□□□□ 0.46
MCF2L-214ENST00000423251 GNAZP19086 355 aa17.92■□□□□ 0.46
MCF2L-214ENST00000423251 GRK3P35626 688 aa17.92■□□□□ 0.46
MCF2L-214ENST00000423251 RPS15AP62244 130 aaKnown RBP17.92■□□□□ 0.46
MCF2L-214ENST00000423251 CLN3Q13286 438 aa17.92■□□□□ 0.46
MCF2L-214ENST00000423251 SETDB1Q15047 1291 aa17.92■□□□□ 0.46
MCF2L-214ENST00000423251 METTL2BQ6P1Q9 378 aaKnown RBP17.92■□□□□ 0.46
MCF2L-214ENST00000423251 NXPE4Q6UWF7 544 aa17.92■□□□□ 0.46
MCF2L-214ENST00000423251 LRRC70Q7Z2Q7 622 aa17.92■□□□□ 0.46
MCF2L-214ENST00000423251 TIPARPQ7Z3E1 657 aaKnown RBP17.92■□□□□ 0.46
MCF2L-214ENST00000423251 ESX1Q8N693 406 aa17.92■□□□□ 0.46
MCF2L-214ENST00000423251 NKD1Q969G9 470 aa17.92■□□□□ 0.46
MCF2L-214ENST00000423251 ESAMQ96AP7 390 aa17.92■□□□□ 0.46
MCF2L-214ENST00000423251 SARGQ9BW04 601 aa17.92■□□□□ 0.46
MCF2L-214ENST00000423251 PELI2Q9HAT8 420 aa17.92■□□□□ 0.46
MCF2L-214ENST00000423251 WDR70Q9NW82 654 aa17.92■□□□□ 0.46
MCF2L-214ENST00000423251 TMEM216Q9P0N5 145 aa17.92■□□□□ 0.46
MCF2L-214ENST00000423251 XPR1Q9UBH6 696 aa17.92■□□□□ 0.46
MCF2L-214ENST00000423251 SSUH2Q9Y2M2 353 aa17.92■□□□□ 0.46
MCF2L-214ENST00000423251 TNPO3Q9Y5L0 923 aaKnown RBP17.92■□□□□ 0.46
MCF2L-214ENST00000423251 SDK2Q58EX2 2172 aa17.91■□□□□ 0.46
MCF2L-214ENST00000423251 SETXQ7Z333 2677 aaKnown RBP17.91■□□□□ 0.46
MCF2L-214ENST00000423251 LOC105369274A0A096LPK9 316 aa17.91■□□□□ 0.46
MCF2L-214ENST00000423251 LOC102723532A0A0G2JNH3 316 aa17.91■□□□□ 0.46
MCF2L-214ENST00000423251 FITM1A5D6W6 292 aa17.91■□□□□ 0.46
MCF2L-214ENST00000423251 H0YGG7 62 aa17.91■□□□□ 0.46
MCF2L-214ENST00000423251 TXNDC9O14530 226 aa17.91■□□□□ 0.46
MCF2L-214ENST00000423251 HAT1O14929 419 aa17.91■□□□□ 0.46
MCF2L-214ENST00000423251 ZSCAN9O15535 394 aaPredicted RBP17.91■□□□□ 0.46
MCF2L-214ENST00000423251 CCNT2O60583 730 aaKnown RBP17.91■□□□□ 0.46
MCF2L-214ENST00000423251 CTSBP07858 339 aa17.91■□□□□ 0.46
MCF2L-214ENST00000423251 CCNYL3P0C7X3 344 aa17.91■□□□□ 0.46
MCF2L-214ENST00000423251 CCT5P48643 541 aa17.91■□□□□ 0.46
MCF2L-214ENST00000423251 AGTR2P50052 363 aa17.91■□□□□ 0.46
MCF2L-214ENST00000423251 ATP1A2P50993 1020 aa17.91■□□□□ 0.46
MCF2L-214ENST00000423251 ARSFP54793 590 aa17.91■□□□□ 0.46
MCF2L-214ENST00000423251 VSX2P58304 361 aaPredicted RBP17.91■□□□□ 0.46
MCF2L-214ENST00000423251 ARF3P61204 181 aaPredicted RBP17.91■□□□□ 0.46
MCF2L-214ENST00000423251 CDC16Q13042 620 aa17.91■□□□□ 0.46
MCF2L-214ENST00000423251 GRM7Q14831 915 aa17.91■□□□□ 0.46
MCF2L-214ENST00000423251 PFKFB4Q16877 469 aa17.91■□□□□ 0.46
MCF2L-214ENST00000423251 WASHC2DQ5SRD0 308 aa17.91■□□□□ 0.46
MCF2L-214ENST00000423251 CATSPEREQ5SY80 951 aa17.91■□□□□ 0.46
MCF2L-214ENST00000423251 BEND6Q5SZJ8 279 aaPredicted RBP17.91■□□□□ 0.46
MCF2L-214ENST00000423251 PRAMEF17Q5VTA0 474 aa17.91■□□□□ 0.46
MCF2L-214ENST00000423251 YOD1Q5VVQ6 348 aaPredicted RBP17.91■□□□□ 0.46
MCF2L-214ENST00000423251 FRMPD2BQ6IN97 320 aa17.91■□□□□ 0.46
MCF2L-214ENST00000423251 CACNA2D3Q8IZS8 1091 aa17.91■□□□□ 0.46
MCF2L-214ENST00000423251 OR4N4Q8N0Y3 316 aa17.91■□□□□ 0.46
MCF2L-214ENST00000423251 SLC38A9Q8NBW4 561 aa17.91■□□□□ 0.46
MCF2L-214ENST00000423251 GALNT6Q8NCL4 622 aa17.91■□□□□ 0.46
MCF2L-214ENST00000423251 SNRNP27Q8WVK2 155 aaKnown RBP17.91■□□□□ 0.46
MCF2L-214ENST00000423251 RERGQ96A58 199 aaPredicted RBP17.91■□□□□ 0.46
MCF2L-214ENST00000423251 WBP1Q96G27 269 aa17.91■□□□□ 0.46
MCF2L-214ENST00000423251 ACTR5Q9H9F9 607 aaPredicted RBP17.91■□□□□ 0.46
MCF2L-214ENST00000423251 IRAK4Q9NWZ3 460 aa17.91■□□□□ 0.46
MCF2L-214ENST00000423251 CPSF2Q9P2I0 782 aaKnown RBP17.91■□□□□ 0.46
MCF2L-214ENST00000423251 PADI1Q9ULC6 663 aa17.91■□□□□ 0.46
MCF2L-214ENST00000423251 SRPK3Q9UPE1 567 aa17.91■□□□□ 0.46
MCF2L-214ENST00000423251 SPTBP11277 2137 aa17.9■□□□□ 0.46
MCF2L-214ENST00000423251 FOXO6A8MYZ6 492 aa17.9■□□□□ 0.46
MCF2L-214ENST00000423251 K7ENP7 123 aa17.9■□□□□ 0.46
MCF2L-214ENST00000423251 K7EPI3 171 aa17.9■□□□□ 0.46
MCF2L-214ENST00000423251 SMIM24O75264 130 aa17.9■□□□□ 0.46
MCF2L-214ENST00000423251 H2AFYO75367 372 aaKnown RBP17.9■□□□□ 0.46
MCF2L-214ENST00000423251 C1GALT1C1LP0DN25 315 aa17.9■□□□□ 0.46
MCF2L-214ENST00000423251 CRHR1P34998 444 aa17.9■□□□□ 0.46
MCF2L-214ENST00000423251 GCGRP47871 477 aa17.9■□□□□ 0.46
MCF2L-214ENST00000423251 EMP3P54852 163 aa17.9■□□□□ 0.46
MCF2L-214ENST00000423251 SLC18A2Q05940 514 aa17.9■□□□□ 0.46
MCF2L-214ENST00000423251 PCDH1Q08174 1060 aa17.9■□□□□ 0.46
MCF2L-214ENST00000423251 ABHD18Q0P651 414 aa17.9■□□□□ 0.46
MCF2L-214ENST00000423251 PCBP2Q15366 365 aaKnown RBP eCLIP17.9■□□□□ 0.463e-8■■■■■ 33.9
MCF2L-214ENST00000423251 TGIF1Q15583 401 aa17.9■□□□□ 0.46
MCF2L-214ENST00000423251 PDK4Q16654 411 aa17.9■□□□□ 0.46
MCF2L-214ENST00000423251 FAM214AQ32MH5 1076 aa17.9■□□□□ 0.46
MCF2L-214ENST00000423251 FBXO48Q5FWF7 155 aa17.9■□□□□ 0.46
MCF2L-214ENST00000423251 ATG9BQ674R7 924 aa17.9■□□□□ 0.46
MCF2L-214ENST00000423251 RHBDD2Q6NTF9 364 aa17.9■□□□□ 0.46
MCF2L-214ENST00000423251 INO80CQ6PI98 192 aaPredicted RBP17.9■□□□□ 0.46
MCF2L-214ENST00000423251 SLCO4C1Q6ZQN7 724 aa17.9■□□□□ 0.46
MCF2L-214ENST00000423251 CROCCP2Q86T23 111 aa17.9■□□□□ 0.46
MCF2L-214ENST00000423251 TBC1D19Q8N5T2 526 aa17.9■□□□□ 0.46
MCF2L-214ENST00000423251 ZNF655Q8N720 491 aaPredicted RBP17.9■□□□□ 0.46
MCF2L-214ENST00000423251 CLIP3Q96DZ5 547 aa17.9■□□□□ 0.46
MCF2L-214ENST00000423251 NDC1Q9BTX1 674 aa17.9■□□□□ 0.46
MCF2L-214ENST00000423251 SLC7A5P2Q9GIP4 190 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms