RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 BOP1Q14137 746 aaKnown RBP4.75□□□□□ -1.65
VPS41-205ENST00000414632 CLCA4Q14CN2 919 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 PCOLCEQ15113 449 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 TPSAB1Q15661 275 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 ST3GAL2Q16842 350 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 ISXQ2M1V0 245 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 PCID2Q5JVF3 399 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 CASC4Q6P4E1 433 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 LRRC8BQ6P9F7 803 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 IYDQ6PHW0 289 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 CAND1Q86VP6 1230 aaKnown RBP4.75□□□□□ -1.65
VPS41-205ENST00000414632 AMZ2Q86W34 360 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 CFAP206Q8IYR0 622 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 SFRP1Q8N474 314 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 DCBLD1Q8N8Z6 715 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 ZNF527Q8NB42 609 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 LKAAEAR1Q8TD35 194 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 GRK7Q8WTQ7 553 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 STYXQ8WUJ0 223 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 GCDHQ92947 438 aaPredicted RBP4.75□□□□□ -1.65
VPS41-205ENST00000414632 FAM136AQ96C01 138 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 ULK4Q96C45 1275 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 LIN37Q96GY3 246 aaPredicted RBP4.75□□□□□ -1.65
VPS41-205ENST00000414632 RMDN2Q96LZ7 410 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 C16orf45Q96MC5 204 aaPredicted RBP4.75□□□□□ -1.65
VPS41-205ENST00000414632 PWWP2AQ96N64 755 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 SERPINB12Q96P63 405 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 RANBP9Q96S59 729 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 KRT12Q99456 494 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 SLC38A3Q99624 504 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 COPS8Q99627 209 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 NRTNQ99748 197 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 TIMM29Q9BSF4 260 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 C1orf43Q9BWL3 253 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 TRIM54Q9BYV2 358 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 TRIM31Q9BZY9 425 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 WWP1Q9H0M0 922 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 MYLK2Q9H1R3 596 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 EIF2B3Q9NR50 452 aaKnown RBP4.75□□□□□ -1.65
VPS41-205ENST00000414632 IMP3Q9NV31 184 aaKnown RBP4.75□□□□□ -1.65
VPS41-205ENST00000414632 NCKIPSDQ9NZQ3 722 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 ZNF624Q9P2J8 865 aaPredicted RBP4.75□□□□□ -1.65
VPS41-205ENST00000414632 RUVBL1Q9Y265 456 aaKnown RBP4.75□□□□□ -1.65
VPS41-205ENST00000414632 NEU2Q9Y3R4 380 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 ENTPD2Q9Y5L3 495 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 EPG5Q9HCE0 2579 aa4.75□□□□□ -1.65
VPS41-205ENST00000414632 ANKRD12Q6UB98 2062 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 SDK2Q58EX2 2172 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 TPRP12270 2363 aaKnown RBP4.74□□□□□ -1.65
VPS41-205ENST00000414632 IGHV1OR21-1A0A087WYE8 117 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 TRBV5-4A0A0C4DH59 114 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 AGAP14A8MT82 685 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 IQCF5A8MTL0 148 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 GPR89AB7ZAQ6 455 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 H7C0S8 307 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 TAF4O00268 1085 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 NTN3O00634 580 aaPredicted RBP4.74□□□□□ -1.65
VPS41-205ENST00000414632 CES2O00748 559 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 DNALI1O14645 258 aaPredicted RBP4.74□□□□□ -1.65
VPS41-205ENST00000414632 CD3EAPO15446 510 aaKnown RBP4.74□□□□□ -1.65
VPS41-205ENST00000414632 TLX3O43711 291 aaPredicted RBP4.74□□□□□ -1.65
VPS41-205ENST00000414632 NUDT21O43809 227 aaKnown RBP4.74□□□□□ -1.65
VPS41-205ENST00000414632 VAPBO95292 243 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 VIPP01282 170 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 CD1AP06126 327 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 PROS1P07225 676 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 GPR89BP0CG08 455 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 RALBP11234 206 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 CDK4P11802 303 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 ATP1B2P14415 290 aaPredicted RBP4.74□□□□□ -1.65
VPS41-205ENST00000414632 VCLP18206 1134 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 ITIH1P19827 911 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 CD1CP29017 333 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 PDHA2P29803 388 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 ETV5P41161 510 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 PAFAH1B1P43034 410 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 FASLGP48023 281 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 LIMS1P48059 325 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 ARCN1P48444 511 aaKnown RBP4.74□□□□□ -1.65
VPS41-205ENST00000414632 PIK3CGP48736 1102 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 NPY2RP49146 381 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 PRLHRP49683 370 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 INHBCP55103 352 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 GFERP55789 205 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 EIF3BP55884 814 aaKnown RBP4.74□□□□□ -1.65
VPS41-205ENST00000414632 SOX8P57073 446 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 PPP1CAP62136 330 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 UBE2IP63279 158 aaKnown RBP4.74□□□□□ -1.65
VPS41-205ENST00000414632 DR1Q01658 176 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 CFHR1Q03591 330 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 ACVR1Q04771 509 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 DUSP2Q05923 314 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 PTK6Q13882 451 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 GPR18Q14330 331 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 C16orf72Q14CZ0 275 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 RPE65Q16518 533 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 MPEG1Q2M385 716 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 GPR33Q49SQ1 333 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 BCL7AQ4VC05 210 aa4.74□□□□□ -1.65
VPS41-205ENST00000414632 FASTKD1Q53R41 847 aaKnown RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms