RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 ZNF578Q96N58 590 aaPredicted RBP5.17□□□□□ -1.58
LINC00342-201ENST00000412393 CATSPER2Q96P56 530 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 GFM1Q96RP9 751 aaKnown RBP5.17□□□□□ -1.58
LINC00342-201ENST00000412393 ECSITQ9BQ95 431 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 MLPHQ9BV36 600 aaPredicted RBP5.17□□□□□ -1.58
LINC00342-201ENST00000412393 RIOK2Q9BVS4 552 aaKnown RBP5.17□□□□□ -1.58
LINC00342-201ENST00000412393 TRIM55Q9BYV6 548 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 LRRN3Q9H3W5 708 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 ASCL3Q9NQ33 180 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 TRNAU1APQ9NX07 287 aaKnown RBP5.17□□□□□ -1.58
LINC00342-201ENST00000412393 SEPT10Q9P0V9 454 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 LRIT1Q9P2V4 623 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 ZNHIT2Q9UHR6 403 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 SATB2Q9UPW6 733 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 SHOC2Q9UQ13 582 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.17□□□□□ -1.58
LINC00342-201ENST00000412393 NPFFR2Q9Y5X5 522 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 WDFY3Q8IZQ1 3526 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 ZFYVE26Q68DK2 2539 aa5.17□□□□□ -1.58
LINC00342-201ENST00000412393 PIKFYVEQ9Y2I7 2098 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 ZNF106Q9H2Y7 1883 aaKnown RBP5.16□□□□□ -1.58
LINC00342-201ENST00000412393 C1orf232A0A0U1RR37 186 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 A0A1W2PNU3 283 aaPredicted RBP5.16□□□□□ -1.58
LINC00342-201ENST00000412393 A0A1W2PQM1 296 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 PMS2P1A4D2B8 440 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 ANKRD66B4E2M5 251 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 D6RAR5 112 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 TMX2-CTNND1H3BSU7 103 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 DNALI1O14645 258 aaPredicted RBP5.16□□□□□ -1.58
LINC00342-201ENST00000412393 INPP4BO15327 924 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 NUDT21O43809 227 aaKnown RBP5.16□□□□□ -1.58
LINC00342-201ENST00000412393 CCNT2O60583 730 aaKnown RBP5.16□□□□□ -1.58
LINC00342-201ENST00000412393 SPAG6O75602 509 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 HAUS5O94927 633 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 TNFSF15O95150 251 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 ACSL3O95573 720 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 SOD1P00441 154 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 FGF1P05230 155 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 UQCRBP14927 111 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 BMP5P22003 454 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 VAMP1P23763 118 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 AK4P27144 223 aaPredicted RBP5.16□□□□□ -1.58
LINC00342-201ENST00000412393 RPA3P35244 121 aaPredicted RBP5.16□□□□□ -1.58
LINC00342-201ENST00000412393 ADCY8P40145 1251 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 CETN2P41208 172 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 ECI1P42126 302 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 CDKN2BP42772 138 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 RPL5P46777 297 aaKnown RBP5.16□□□□□ -1.58
LINC00342-201ENST00000412393 GLRBP48167 497 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 SPINT3P49223 89 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 PSMD7P51665 324 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 PDX1P52945 283 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 MAZP56270 477 aaKnown RBP5.16□□□□□ -1.58
LINC00342-201ENST00000412393 POLE2P56282 527 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 PHEXP78562 749 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 PEX6Q13608 980 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 TFDP2Q14188 446 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 GALNT3Q14435 633 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 LLGL1Q15334 1064 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 SLC1A5Q15758 541 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 HSP90AA5PQ58FG0 334 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 FAM182AQ5T1J6 154 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 CERCAMQ5T4B2 595 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 UBAP2Q5T6F2 1119 aaKnown RBP5.16□□□□□ -1.58
LINC00342-201ENST00000412393 C6orf163Q5TEZ5 329 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 KAZNQ674X7 775 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 DHRS4L2Q6PKH6 230 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 C3orf62Q6ZUJ4 267 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 RAB11FIP2Q7L804 512 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 MTDHQ86UE4 582 aaKnown RBP5.16□□□□□ -1.58
LINC00342-201ENST00000412393 PDSS2Q86YH6 399 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 SFTPA2Q8IWL1 248 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 RAVER1Q8IY67 606 aaKnown RBP5.16□□□□□ -1.58
LINC00342-201ENST00000412393 SRRM1Q8IYB3 904 aaKnown RBP5.16□□□□□ -1.58
LINC00342-201ENST00000412393 RCOR2Q8IZ40 523 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 ST13P4Q8IZP2 240 aaPredicted RBP5.16□□□□□ -1.58
LINC00342-201ENST00000412393 FBXO39Q8N4B4 442 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 ARL14Q8N4G2 192 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 MARVELD2Q8N4S9 558 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 CCDC110Q8TBZ0 833 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 TRPC4APQ8TEL6 797 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 NAT14Q8WUY8 206 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 KCNE4Q8WWG9 221 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 PATE1Q8WXA2 126 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 JADE3Q92613 823 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 STMN2Q93045 179 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 PPP1R14AQ96A00 147 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 IMP4Q96G21 291 aaKnown RBP5.16□□□□□ -1.58
LINC00342-201ENST00000412393 PRR11Q96HE9 360 aaPredicted RBP5.16□□□□□ -1.58
LINC00342-201ENST00000412393 AGAP3Q96P47 875 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 OR2M4Q96R27 311 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 TRIB3Q96RU7 358 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 LYSMD1Q96S90 227 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 ADGRE3Q9BY15 652 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 STRADBQ9C0K7 418 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 BRD8Q9H0E9 1235 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 CDH19Q9H159 772 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 SLC25A51Q9H1U9 297 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 CDIP1Q9H305 208 aa5.16□□□□□ -1.58
LINC00342-201ENST00000412393 FAM83DQ9H4H8 585 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms