RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 FOXN2P32314 431 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 CTNNA1P35221 906 aaKnown RBP7.35□□□□□ -1.23
LSM5-202ENST00000409292 PTPN7P35236 360 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 AGTR2P50052 363 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 EXT1Q16394 746 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 C3AR1Q16581 482 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 BTBD16Q32M84 506 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 MINDY4Q4G0A6 757 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 ANKRD20A4Q4UJ75 823 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 SPNS3Q6ZMD2 512 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 MEX3BQ6ZN04 569 aaKnown RBP7.35□□□□□ -1.23
LSM5-202ENST00000409292 NEK10Q6ZWH5 1172 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 RNF44Q7L0R7 432 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 ADCK2Q7Z695 626 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 SDCCAG8Q86SQ7 713 aaPredicted RBP7.35□□□□□ -1.23
LSM5-202ENST00000409292 SPPL2CQ8IUH8 684 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 GHDCQ8N2G8 530 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 TXLNBQ8N3L3 684 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 MPP5Q8N3R9 675 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 TAB3Q8N5C8 712 aaPredicted RBP7.35□□□□□ -1.23
LSM5-202ENST00000409292 SLC5A8Q8N695 610 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 UBL4BQ8N7F7 174 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 LINC01555Q8NAE3 123 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 PPHLN1Q8NEY8 458 aaKnown RBP7.35□□□□□ -1.23
LSM5-202ENST00000409292 OR2L3Q8NG85 312 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 HMGCLL1Q8TB92 370 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 SMPDL3AQ92484 453 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 PSMF1Q92530 271 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 KRT35Q92764 455 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 PEX13Q92968 403 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 HDAC10Q969S8 669 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 TMEM125Q96AQ2 219 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 GPR137Q96N19 417 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 UCN2Q96RP3 112 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 DPH7Q9BTV6 452 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 TRIM8Q9BZR9 551 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 TGIF2Q9GZN2 237 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 DRC3Q9H069 523 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 ZNF700Q9H0M5 742 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 KCNK13Q9HB14 408 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 MRPS30Q9NP92 439 aaKnown RBP7.35□□□□□ -1.23
LSM5-202ENST00000409292 CATSPERZQ9NTU4 200 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 RIMKLBQ9ULI2 386 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 PCDHA3Q9Y5H8 950 aa7.35□□□□□ -1.23
LSM5-202ENST00000409292 PCSK5Q92824 1860 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 LOC102723996A0A087X1L8 192 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 A0A1W2PQ72 361 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 MROH6A6NGR9 719 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 USP27XA6NNY8 438 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 NPIPA5E9PKD4 350 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 H0YGG7 62 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 CTSVO60911 334 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 GPC4O75487 556 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 SLCO2B1O94956 709 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 CATP04040 527 aaKnown RBP7.34□□□□□ -1.23
LSM5-202ENST00000409292 TPBGLP0DKB5 382 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 PTMSP20962 102 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 MST1P26927 711 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 AOAHP28039 575 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 STIP1P31948 543 aaKnown RBP7.34□□□□□ -1.23
LSM5-202ENST00000409292 FDFT1P37268 417 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 ARF3P61204 181 aaPredicted RBP7.34□□□□□ -1.23
LSM5-202ENST00000409292 SKP1P63208 163 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 ABATP80404 500 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 ACTN3Q08043 901 aaPredicted RBP7.34□□□□□ -1.23
LSM5-202ENST00000409292 MSLNQ13421 630 aaPredicted RBP7.34□□□□□ -1.23
LSM5-202ENST00000409292 PTK6Q13882 451 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 ARHGAP19Q14CB8 494 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 TSTD2Q5T7W7 516 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 THEMIS2Q5TEJ8 643 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 TMEM211Q6ICI0 200 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 FRMPD2BQ6IN97 320 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 CCDC170Q8IYT3 715 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 FAM71DQ8N9W8 422 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 CHDHQ8NE62 594 aaPredicted RBP7.34□□□□□ -1.23
LSM5-202ENST00000409292 PHF10Q8WUB8 498 aaKnown RBP7.34□□□□□ -1.23
LSM5-202ENST00000409292 ASB5Q8WWX0 329 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 GORASP1Q9BQQ3 440 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 ACAT2Q9BWD1 397 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 CIDEBQ9UHD4 219 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 TINAGQ9UJW2 476 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 PPT2Q9UMR5 302 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 NPIPA1Q9UND3 350 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 MEMO1Q9Y316 297 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 KLK4Q9Y5K2 254 aa7.34□□□□□ -1.23
LSM5-202ENST00000409292 PCNX1Q96RV3 2341 aa7.33□□□□□ -1.24
LSM5-202ENST00000409292 LOC105369274A0A096LPK9 316 aa7.33□□□□□ -1.24
LSM5-202ENST00000409292 LOC102723532A0A0G2JNH3 316 aa7.33□□□□□ -1.24
LSM5-202ENST00000409292 OR2A25A4D2G3 310 aa7.33□□□□□ -1.24
LSM5-202ENST00000409292 OR51F1A6NGY5 319 aa7.33□□□□□ -1.24
LSM5-202ENST00000409292 E5RI56 91 aa7.33□□□□□ -1.24
LSM5-202ENST00000409292 E9PLN8 166 aa7.33□□□□□ -1.24
LSM5-202ENST00000409292 H0YIG0 161 aa7.33□□□□□ -1.24
LSM5-202ENST00000409292 PRICKLE3O43900 615 aaPredicted RBP7.33□□□□□ -1.24
LSM5-202ENST00000409292 OR1I1O60431 355 aa7.33□□□□□ -1.24
LSM5-202ENST00000409292 NADKO95544 446 aaPredicted RBP7.33□□□□□ -1.24
LSM5-202ENST00000409292 C1orf105O95561 183 aa7.33□□□□□ -1.24
LSM5-202ENST00000409292 ITGAMP11215 1152 aa7.33□□□□□ -1.24
LSM5-202ENST00000409292 EZRP15311 586 aaKnown RBP7.33□□□□□ -1.24
LSM5-202ENST00000409292 ZNF24P17028 368 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms