RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 FAM221BA6H8Z2 402 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 FAM155AB1AL88 458 aaPredicted RBP13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 E7ENX8 843 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 PLK4O00444 970 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 SLC7A4O43246 635 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 CYP11A1P05108 521 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 C8orf89P0DMQ9 161 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 DLG1Q12959 904 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 ENPP2Q13822 863 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 ELOCQ15369 112 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 FAM92BQ6ZTR7 304 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 LINGO2Q7L985 606 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 RABEPKQ7Z6M1 372 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 TRIM74Q86UV6 250 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 LAPTM4BQ86VI4 370 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 SLC13A3Q8WWT9 602 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 PIGVQ9NUD9 493 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 IGSF9Q9P2J2 1179 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 ZNF282Q9UDV7 671 aaPredicted RBP13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 C19orf25Q9UFG5 118 aaPredicted RBP13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 SNX7Q9UNH6 387 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 TBX1O43435 398 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 SCELO95171 688 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 CSN2P05814 226 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 RBMS1P29558 406 aaKnown RBP13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 NTSR1P30989 418 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 CRISP3P54108 245 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 KIAA1161Q6NSJ0 714 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 GFM1Q96RP9 751 aaKnown RBP13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 B3GNT4Q9C0J1 378 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 KIAA0355O15063 1070 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 HSD17B2P37059 387 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 ZNF627Q7L945 461 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 ANKFN1Q8N957 763 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 TNFAIP8L1Q8WVP5 186 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 ZNF840PA6NDX5 716 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 FAM170BA6NMN3 283 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 CDC123O75794 336 aaPredicted RBP13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 FHP07954 510 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 ZNF20P17024 532 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 PTGIRP43119 386 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 GPR153Q6NV75 609 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 SLC36A4Q6YBV0 504 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 MBOAT1Q6ZNC8 495 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 TTLQ8NG68 377 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 RGMAQ96B86 450 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 ZSWIM3Q96MP5 696 aa13.85□□□□□ -0.19
PCDHA11-201ENST00000398640 HAS3O00219 553 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 MUSKO15146 869 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 CEBPBP17676 345 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 PFKLP17858 780 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 PRKD1Q15139 912 aaPredicted RBP13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 TCEAL8Q8IYN2 117 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 MRPL38Q96DV4 380 aaKnown RBP13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 SLC35A5Q9BS91 424 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 ZCCHC3Q9NUD5 404 aaKnown RBP13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 FKBP7Q9Y680 259 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 PRAMEF12O95522 483 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 CLCN4P51793 760 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 ID2Q02363 134 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 PDSS1Q5T2R2 415 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 BICRALQ6AI39 1079 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 NUDT13Q86X67 352 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 CNTD1Q8N815 330 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 THAP3Q8WTV1 239 aaPredicted RBP13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 WDR12Q9GZL7 423 aaKnown RBP13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 B3GAT2Q9NPZ5 323 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 C8orf4Q9NR00 106 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 SDHAF3Q9NRP4 125 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 RIMKLBQ9ULI2 386 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 DAPL1A0PJW8 107 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 RFXAPO00287 272 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 ZNF30P17039 623 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 HSD11B1P28845 292 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 RAB8AP61006 207 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 RPS21P63220 83 aaKnown RBP13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 TMEM139Q8IV31 216 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 IQCKQ8N0W5 287 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 NSMCE3Q96MG7 304 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 TGM7Q96PF1 710 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 SLC2A11Q9BYW1 496 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 TMEM265A0A087WTH1 108 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 CRTC2Q53ET0 693 aaPredicted RBP13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 CRTC1Q6UUV9 634 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 ZZZ3Q8IYH5 903 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 PROKR2Q8NFJ6 384 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 KCNH6Q9H252 994 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 FBRSQ9HAH7 460 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 SLC22A14Q9Y267 594 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 PCDHGB5Q9Y5G0 923 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 EIF1AYO14602 144 aaKnown RBP13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 ITGB1P05556 798 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 PGRP06401 933 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 SRPRAP08240 638 aaKnown RBP13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 MTHFD1P11586 935 aaKnown RBP13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 CD47Q08722 323 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 DPYSL2Q16555 572 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 RNF220Q5VTB9 566 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 PLET1Q6UQ28 207 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms