RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 JRKO75564 520 aa15.19■□□□□ 0.02
CKS1B-202ENST00000368436 KRT14P02533 472 aa15.19■□□□□ 0.02
CKS1B-202ENST00000368436 ENO3P13929 434 aaPredicted RBP15.19■□□□□ 0.02
CKS1B-202ENST00000368436 CTBP1Q13363 440 aa15.19■□□□□ 0.02
CKS1B-202ENST00000368436 THOC5Q13769 683 aaKnown RBP15.19■□□□□ 0.02
CKS1B-202ENST00000368436 SYT16Q17RD7 645 aa15.19■□□□□ 0.02
CKS1B-202ENST00000368436 FAAH2Q6GMR7 532 aa15.19■□□□□ 0.02
CKS1B-202ENST00000368436 TTC27Q6P3X3 843 aa15.19■□□□□ 0.02
CKS1B-202ENST00000368436 SPNS2Q8IVW8 549 aa15.19■□□□□ 0.02
CKS1B-202ENST00000368436 DENND6AQ8IWF6 608 aa15.19■□□□□ 0.02
CKS1B-202ENST00000368436 SIRT6Q8N6T7 355 aa15.19■□□□□ 0.02
CKS1B-202ENST00000368436 ZNF669Q96BR6 464 aaPredicted RBP15.19■□□□□ 0.02
CKS1B-202ENST00000368436 IMMP1LQ96LU5 166 aa15.19■□□□□ 0.02
CKS1B-202ENST00000368436 TAAR6Q96RI8 345 aa15.19■□□□□ 0.02
CKS1B-202ENST00000368436 FBXO6Q9NRD1 293 aaPredicted RBP15.19■□□□□ 0.02
CKS1B-202ENST00000368436 SAMD15Q9P1V8 674 aa15.19■□□□□ 0.02
CKS1B-202ENST00000368436 COMMD10Q9Y6G5 202 aa15.19■□□□□ 0.02
CKS1B-202ENST00000368436 CRYBG3Q68DQ2 2970 aa15.19■□□□□ 0.02
CKS1B-202ENST00000368436 KCNE1BA0A087WTH5 132 aa15.18■□□□□ 0.02
CKS1B-202ENST00000368436 A0A1B0GUH1 482 aa15.18■□□□□ 0.02
CKS1B-202ENST00000368436 H0YIG0 161 aa15.18■□□□□ 0.02
CKS1B-202ENST00000368436 ZBTB14O43829 449 aa15.18■□□□□ 0.02
CKS1B-202ENST00000368436 WFS1O76024 890 aa15.18■□□□□ 0.02
CKS1B-202ENST00000368436 SYF2O95926 243 aaKnown RBP15.18■□□□□ 0.02
CKS1B-202ENST00000368436 CELA2AP08217 269 aa15.18■□□□□ 0.02
CKS1B-202ENST00000368436 F7P08709 466 aaPredicted RBP15.18■□□□□ 0.02
CKS1B-202ENST00000368436 ICAM2P13598 275 aa15.18■□□□□ 0.02
CKS1B-202ENST00000368436 IMPA1P29218 277 aa15.18■□□□□ 0.02
CKS1B-202ENST00000368436 SNRPNP63162 240 aaKnown RBP15.18■□□□□ 0.02
CKS1B-202ENST00000368436 CUL1Q13616 776 aa15.18■□□□□ 0.02
CKS1B-202ENST00000368436 NDUFA9Q16795 377 aa15.18■□□□□ 0.02
CKS1B-202ENST00000368436 C1QL3Q5VWW1 255 aa15.18■□□□□ 0.02
CKS1B-202ENST00000368436 LMNTD2Q8IXW0 634 aa15.18■□□□□ 0.02
CKS1B-202ENST00000368436 CD200R1Q8TD46 325 aa15.18■□□□□ 0.02
CKS1B-202ENST00000368436 NR4A3Q92570 626 aa15.18■□□□□ 0.02
CKS1B-202ENST00000368436 RELTQ969Z4 430 aa15.18■□□□□ 0.02
CKS1B-202ENST00000368436 SERPINB12Q96P63 405 aa15.18■□□□□ 0.02
CKS1B-202ENST00000368436 RNF32Q9H0A6 362 aa15.18■□□□□ 0.02
CKS1B-202ENST00000368436 CCDC68Q9H2F9 335 aa15.18■□□□□ 0.02
CKS1B-202ENST00000368436 XAB2Q9HCS7 855 aaKnown RBP15.18■□□□□ 0.02
CKS1B-202ENST00000368436 TMEM184CQ9NVA4 438 aa15.18■□□□□ 0.02
CKS1B-202ENST00000368436 MKL2Q9ULH7 1088 aa15.18■□□□□ 0.02
CKS1B-202ENST00000368436 NEU2Q9Y3R4 380 aa15.18■□□□□ 0.02
CKS1B-202ENST00000368436 H7BY64 318 aa15.17■□□□□ 0.02
CKS1B-202ENST00000368436 EIF3FO00303 357 aaPredicted RBP15.17■□□□□ 0.02
CKS1B-202ENST00000368436 ZG16O60844 167 aa15.17■□□□□ 0.02
CKS1B-202ENST00000368436 WDPCPO95876 746 aa15.17■□□□□ 0.02
CKS1B-202ENST00000368436 ITGAMP11215 1152 aa15.17■□□□□ 0.02
CKS1B-202ENST00000368436 HRH2P25021 359 aa15.17■□□□□ 0.02
CKS1B-202ENST00000368436 SLC1A2P43004 574 aa15.17■□□□□ 0.02
CKS1B-202ENST00000368436 MAGEA3P43357 314 aa15.17■□□□□ 0.02
CKS1B-202ENST00000368436 AVPR1BP47901 424 aa15.17■□□□□ 0.02
CKS1B-202ENST00000368436 AP2B1P63010 937 aa15.17■□□□□ 0.02
CKS1B-202ENST00000368436 MAT1AQ00266 395 aaKnown RBP15.17■□□□□ 0.02
CKS1B-202ENST00000368436 VN1R4Q7Z5H5 301 aa15.17■□□□□ 0.02
CKS1B-202ENST00000368436 ADCK2Q7Z695 626 aa15.17■□□□□ 0.02
CKS1B-202ENST00000368436 PLD3Q8IV08 490 aa15.17■□□□□ 0.02
CKS1B-202ENST00000368436 AGGF1Q8N302 714 aaeCLIP15.17■□□□□ 0.02
CKS1B-202ENST00000368436 RASGEF1CQ8N431 466 aa15.17■□□□□ 0.02
CKS1B-202ENST00000368436 AMER2Q8N7J2 671 aa15.17■□□□□ 0.02
CKS1B-202ENST00000368436 OR9A4Q8NGU2 314 aa15.17■□□□□ 0.02
CKS1B-202ENST00000368436 MAGEB10Q96LZ2 347 aaPredicted RBP15.17■□□□□ 0.02
CKS1B-202ENST00000368436 PRAP1Q96NZ9 151 aa15.17■□□□□ 0.02
CKS1B-202ENST00000368436 GPR21Q99679 349 aa15.17■□□□□ 0.02
CKS1B-202ENST00000368436 TUBB6Q9BUF5 446 aa15.17■□□□□ 0.02
CKS1B-202ENST00000368436 ABCF3Q9NUQ8 709 aa15.17■□□□□ 0.02
CKS1B-202ENST00000368436 CREBBPQ92793 2442 aa15.17■□□□□ 0.02
CKS1B-202ENST00000368436 SCN3AQ9NY46 2000 aa15.16■□□□□ 0.02
CKS1B-202ENST00000368436 ENO4A6NNW6 628 aa15.16■□□□□ 0.02
CKS1B-202ENST00000368436 KIF5CO60282 957 aa15.16■□□□□ 0.02
CKS1B-202ENST00000368436 NSA2O95478 260 aaKnown RBP15.16■□□□□ 0.02
CKS1B-202ENST00000368436 CYC1P08574 325 aa15.16■□□□□ 0.02
CKS1B-202ENST00000368436 C8orf89P0DMQ9 161 aa15.16■□□□□ 0.02
CKS1B-202ENST00000368436 LONRF1Q17RB8 773 aa15.16■□□□□ 0.02
CKS1B-202ENST00000368436 THEMIS2Q5TEJ8 643 aa15.16■□□□□ 0.02
CKS1B-202ENST00000368436 HIBCHQ6NVY1 386 aaPredicted RBP15.16■□□□□ 0.02
CKS1B-202ENST00000368436 UBE2R2Q712K3 238 aaPredicted RBP15.16■□□□□ 0.02
CKS1B-202ENST00000368436 PIWIL4Q7Z3Z4 852 aaKnown RBP15.16■□□□□ 0.02
CKS1B-202ENST00000368436 CPNE9Q8IYJ1 553 aa15.16■□□□□ 0.02
CKS1B-202ENST00000368436 MAGOHBQ96A72 148 aaKnown RBP15.16■□□□□ 0.02
CKS1B-202ENST00000368436 TM4SF19Q96DZ7 209 aa15.16■□□□□ 0.02
CKS1B-202ENST00000368436 THAP11Q96EK4 314 aa15.16■□□□□ 0.02
CKS1B-202ENST00000368436 SIGLEC10Q96LC7 697 aa15.16■□□□□ 0.02
CKS1B-202ENST00000368436 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.16■□□□□ 0.02
CKS1B-202ENST00000368436 FBXO5Q9UKT4 447 aa15.16■□□□□ 0.02
CKS1B-202ENST00000368436 ENTPD4Q9Y227 616 aa15.16■□□□□ 0.02
CKS1B-202ENST00000368436 OR5H15A6NDH6 313 aa15.15■□□□□ 0.02
CKS1B-202ENST00000368436 GOLGA8MH3BSY2 632 aa15.15■□□□□ 0.02
CKS1B-202ENST00000368436 HAUS5O94927 633 aa15.15■□□□□ 0.02
CKS1B-202ENST00000368436 F10P00742 488 aa15.15■□□□□ 0.02
CKS1B-202ENST00000368436 COILP38432 576 aaPredicted RBP15.15■□□□□ 0.02
CKS1B-202ENST00000368436 KCNK10P57789 538 aa15.15■□□□□ 0.02
CKS1B-202ENST00000368436 RPS15AP62244 130 aaKnown RBP15.15■□□□□ 0.02
CKS1B-202ENST00000368436 CYP1B1Q16678 543 aa15.15■□□□□ 0.02
CKS1B-202ENST00000368436 MYO7BQ6PIF6 2116 aa15.15■□□□□ 0.02
CKS1B-202ENST00000368436 PRSS41Q7RTY9 318 aa15.15■□□□□ 0.02
CKS1B-202ENST00000368436 FJX1Q86VR8 437 aa15.15■□□□□ 0.02
CKS1B-202ENST00000368436 LRRC8AQ8IWT6 810 aa15.15■□□□□ 0.02
CKS1B-202ENST00000368436 SHISA5Q8N114 240 aa15.15■□□□□ 0.02
CKS1B-202ENST00000368436 NAT8LQ8N9F0 302 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms