RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 OR8J3Q8NGG0 315 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 MCFD2Q8NI22 146 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 LMX1AQ8TE12 382 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 UBASH3BQ8TF42 649 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 BORCS5Q969J3 196 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 ZNF689Q96CS4 500 aaPredicted RBP4.72□□□□□ -1.65
SCN3A-202ENST00000360093 CPNE2Q96FN4 548 aaPredicted RBP4.72□□□□□ -1.65
SCN3A-202ENST00000360093 PYURFQ96I23 114 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 CDK15Q96Q40 435 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 HBEGFQ99075 208 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 G6PC3Q9BUM1 346 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 DSN1Q9H410 356 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 PLEKHA1Q9HB21 404 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 TAS2R9Q9NYW1 312 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 VSTM5A8MXK1 200 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 CDC7O00311 574 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 DFNA5O60443 496 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 CBFA2T3O75081 653 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 SIX3O95343 332 aaPredicted RBP4.72□□□□□ -1.65
SCN3A-202ENST00000360093 SMSP52788 366 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 MTPNP58546 118 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 RPS15AP62244 130 aaKnown RBP4.72□□□□□ -1.65
SCN3A-202ENST00000360093 ATP1A4Q13733 1029 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 AMZ1Q400G9 498 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 FBXO48Q5FWF7 155 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 SLC51AQ86UW1 340 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 NPAS3Q8IXF0 933 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 CBARPQ8N350 705 aaPredicted RBP4.72□□□□□ -1.65
SCN3A-202ENST00000360093 CPXM2Q8N436 756 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 OR4E2Q8NGC2 313 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 FAM174AQ8TBP5 190 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 RDH12Q96NR8 316 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 GPER1Q99527 375 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 MGME1Q9BQP7 344 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 HERPUD2Q9BSE4 406 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 KCNH6Q9H252 994 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 PNO1Q9NRX1 252 aaKnown RBP4.72□□□□□ -1.65
SCN3A-202ENST00000360093 NLGN3Q9NZ94 848 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 DNMT3AQ9Y6K1 912 aaPredicted RBP4.72□□□□□ -1.65
SCN3A-202ENST00000360093 A0A1W2PQ72 361 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 AHCYL1O43865 530 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 PGM3O95394 542 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 H1F0P07305 194 aaKnown RBP4.72□□□□□ -1.65
SCN3A-202ENST00000360093 DBTP11182 482 aaKnown RBP4.72□□□□□ -1.65
SCN3A-202ENST00000360093 UQCRC2P22695 453 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 CXCR1P25024 350 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 MSX2P35548 267 aaPredicted RBP4.72□□□□□ -1.65
SCN3A-202ENST00000360093 NDUFA5Q16718 116 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 SYT16Q17RD7 645 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 SMU1Q2TAY7 513 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 IQCCQ4KMZ1 466 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 TOR1AIP1Q5JTV8 583 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 RTP2Q5QGT7 225 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 ARHGAP40Q5TG30 622 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 OR2T5Q6IEZ7 315 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 SLC30A6Q6NXT4 461 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 SLC36A4Q6YBV0 504 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 DPY19L3Q6ZPD9 716 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 OR4K14Q8NGD5 310 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 OR2T29Q8NH02 315 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 UFD1Q92890 307 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 IGSF8Q969P0 613 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 SCRN2Q96FV2 425 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 REEP4Q9H6H4 257 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 ADAP2Q9NPF8 381 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 B3GAT2Q9NPZ5 323 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 PITPNAQ00169 270 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 MSS51Q4VC12 460 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 FAM26DQ5JW98 314 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 ZNF550Q7Z398 422 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 PIM3Q86V86 326 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 CPNE8Q86YQ8 564 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 PLA2G15Q8NCC3 412 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 LRTOMTQ8WZ04 291 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 RNF31Q96EP0 1072 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 POLR2J3Q9H1A7 115 aaKnown RBP4.72□□□□□ -1.65
SCN3A-202ENST00000360093 GPN1Q9HCN4 374 aaPredicted RBP4.72□□□□□ -1.65
SCN3A-202ENST00000360093 ING4Q9UNL4 249 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 PDE4DIPQ5VU43 2346 aa4.72□□□□□ -1.65
SCN3A-202ENST00000360093 MARF1Q9Y4F3 1742 aaKnown RBP4.71□□□□□ -1.65
SCN3A-202ENST00000360093 SAP18O00422 153 aaKnown RBP4.71□□□□□ -1.65
SCN3A-202ENST00000360093 HCRTO43612 131 aa4.71□□□□□ -1.65
SCN3A-202ENST00000360093 ITM2AO43736 263 aa4.71□□□□□ -1.65
SCN3A-202ENST00000360093 DHFRP00374 187 aa4.71□□□□□ -1.65
SCN3A-202ENST00000360093 SYPP08247 313 aa4.71□□□□□ -1.65
SCN3A-202ENST00000360093 ZNF8P17098 575 aaPredicted RBP4.71□□□□□ -1.65
SCN3A-202ENST00000360093 SPINT3P49223 89 aa4.71□□□□□ -1.65
SCN3A-202ENST00000360093 LBX1P52954 281 aa4.71□□□□□ -1.65
SCN3A-202ENST00000360093 FADDQ13158 208 aa4.71□□□□□ -1.65
SCN3A-202ENST00000360093 TECRLQ5HYJ1 363 aa4.71□□□□□ -1.65
SCN3A-202ENST00000360093 PHF19Q5T6S3 580 aa4.71□□□□□ -1.65
SCN3A-202ENST00000360093 SLC25A24Q6NUK1 477 aa4.71□□□□□ -1.65
SCN3A-202ENST00000360093 RPL13AP3Q6NVV1 102 aa4.71□□□□□ -1.65
SCN3A-202ENST00000360093 CEACAM20Q6UY09 585 aa4.71□□□□□ -1.65
SCN3A-202ENST00000360093 MSANTD1Q6ZTZ1 278 aa4.71□□□□□ -1.65
SCN3A-202ENST00000360093 UXS1Q8NBZ7 420 aa4.71□□□□□ -1.65
SCN3A-202ENST00000360093 OR52J3Q8NH60 311 aa4.71□□□□□ -1.65
SCN3A-202ENST00000360093 OR5P2Q8WZ92 322 aa4.71□□□□□ -1.65
SCN3A-202ENST00000360093 ZNF317Q96PQ6 595 aaPredicted RBP4.71□□□□□ -1.65
SCN3A-202ENST00000360093 KLHL42Q9P2K6 505 aa4.71□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms