RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 C1orf21Q9H246 121 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 WDR41Q9HAD4 459 aa15.35■□□□□ 0.05
PDGFB-201ENST00000331163 CUEDC1Q9NWM3 386 aaPredicted RBP15.35■□□□□ 0.05
PDGFB-201ENST00000331163 RSL24D1Q9UHA3 163 aaKnown RBP15.35■□□□□ 0.05
PDGFB-201ENST00000331163 SOBPA7XYQ1 873 aa15.34■□□□□ 0.05
PDGFB-201ENST00000331163 TMX2-CTNND1H3BSU7 103 aa15.34■□□□□ 0.05
PDGFB-201ENST00000331163 RPN2P04844 631 aa15.34■□□□□ 0.05
PDGFB-201ENST00000331163 PI4KAP42356 2102 aa15.34■□□□□ 0.05
PDGFB-201ENST00000331163 SPDYE7PQ495Y7 208 aa15.34■□□□□ 0.05
PDGFB-201ENST00000331163 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.34■□□□□ 0.05
PDGFB-201ENST00000331163 C1orf52Q8N6N3 182 aaKnown RBP15.34■□□□□ 0.05
PDGFB-201ENST00000331163 RHEBL1Q8TAI7 183 aa15.34■□□□□ 0.05
PDGFB-201ENST00000331163 ASB11Q8WXH4 323 aa15.34■□□□□ 0.05
PDGFB-201ENST00000331163 OTUB1Q96FW1 271 aaPredicted RBP15.34■□□□□ 0.05
PDGFB-201ENST00000331163 SPACA7Q96KW9 195 aa15.34■□□□□ 0.05
PDGFB-201ENST00000331163 STARD5Q9NSY2 213 aa15.34■□□□□ 0.05
PDGFB-201ENST00000331163 OARD1Q9Y530 152 aa15.34■□□□□ 0.05
PDGFB-201ENST00000331163 MAGEB17A8MXT2 336 aa15.34■□□□□ 0.05
PDGFB-201ENST00000331163 SMAD2Q15796 467 aaKnown RBP15.34■□□□□ 0.05
PDGFB-201ENST00000331163 DGLUCYQ7Z3D6 616 aa15.34■□□□□ 0.05
PDGFB-201ENST00000331163 BTBD9Q96Q07 612 aa15.34■□□□□ 0.05
PDGFB-201ENST00000331163 TRMOQ9BU70 441 aa15.34■□□□□ 0.05
PDGFB-201ENST00000331163 TBC1D29Q9UFV1 150 aa15.34■□□□□ 0.05
PDGFB-201ENST00000331163 FBXW2Q9UKT8 454 aa15.34■□□□□ 0.05
PDGFB-201ENST00000331163 RIMKLBQ9ULI2 386 aa15.34■□□□□ 0.05
PDGFB-201ENST00000331163 OR6C74A6NCV1 312 aa15.34■□□□□ 0.05
PDGFB-201ENST00000331163 TAPBPO15533 448 aa15.34■□□□□ 0.05
PDGFB-201ENST00000331163 ZW10O43264 779 aa15.34■□□□□ 0.05
PDGFB-201ENST00000331163 LAMTOR5O43504 91 aa15.34■□□□□ 0.05
PDGFB-201ENST00000331163 NUAK1O60285 661 aa15.34■□□□□ 0.05
PDGFB-201ENST00000331163 CD6P30203 668 aa15.34■□□□□ 0.05
PDGFB-201ENST00000331163 SLC7A2P52569 658 aa15.34■□□□□ 0.05
PDGFB-201ENST00000331163 NR1H2P55055 460 aa15.34■□□□□ 0.05
PDGFB-201ENST00000331163 PLEKHS1Q5SXH7 462 aa15.34■□□□□ 0.05
PDGFB-201ENST00000331163 GCNT7Q6ZNI0 430 aa15.34■□□□□ 0.05
PDGFB-201ENST00000331163 PATL1Q86TB9 770 aaKnown RBP15.34■□□□□ 0.05
PDGFB-201ENST00000331163 LILRA2Q8N149 483 aa15.34■□□□□ 0.05
PDGFB-201ENST00000331163 FBXO30Q8TB52 745 aa15.34■□□□□ 0.05
PDGFB-201ENST00000331163 HDAC8Q9BY41 377 aa15.34■□□□□ 0.05
PDGFB-201ENST00000331163 ZNF232Q9UNY5 417 aa15.34■□□□□ 0.05
PDGFB-201ENST00000331163 SAC3D1A6NKF1 404 aa15.33■□□□□ 0.05
PDGFB-201ENST00000331163 E2F3O00716 465 aa15.33■□□□□ 0.05
PDGFB-201ENST00000331163 NRP2O60462 931 aa15.33■□□□□ 0.05
PDGFB-201ENST00000331163 SNRPB2P08579 225 aaKnown RBP15.33■□□□□ 0.05
PDGFB-201ENST00000331163 CDH3P22223 829 aa15.33■□□□□ 0.05
PDGFB-201ENST00000331163 GPC1P35052 558 aa15.33■□□□□ 0.05
PDGFB-201ENST00000331163 PRLHRP49683 370 aa15.33■□□□□ 0.05
PDGFB-201ENST00000331163 SRP54P61011 504 aaKnown RBP15.33■□□□□ 0.05
PDGFB-201ENST00000331163 UAP1L1Q3KQV9 507 aa15.33■□□□□ 0.05
PDGFB-201ENST00000331163 TPRG1LQ5T0D9 272 aa15.33■□□□□ 0.05
PDGFB-201ENST00000331163 C16orf87Q6PH81 154 aa15.33■□□□□ 0.05
PDGFB-201ENST00000331163 SLC38A3Q99624 504 aa15.33■□□□□ 0.05
PDGFB-201ENST00000331163 LTB4R2Q9NPC1 389 aa15.33■□□□□ 0.05
PDGFB-201ENST00000331163 SH3GLB1Q9Y371 365 aa15.33■□□□□ 0.05
PDGFB-201ENST00000331163 KLK1P06870 262 aa15.33■□□□□ 0.04
PDGFB-201ENST00000331163 PLOD1Q02809 727 aaPredicted RBP15.33■□□□□ 0.04
PDGFB-201ENST00000331163 GAS6Q14393 721 aa15.33■□□□□ 0.04
PDGFB-201ENST00000331163 MTX3Q5HYI7 312 aa15.33■□□□□ 0.04
PDGFB-201ENST00000331163 PRPF38BQ5VTL8 546 aaKnown RBP15.33■□□□□ 0.04
PDGFB-201ENST00000331163 FRG2Q64ET8 278 aa15.33■□□□□ 0.04
PDGFB-201ENST00000331163 NRSN1Q8IZ57 195 aa15.33■□□□□ 0.04
PDGFB-201ENST00000331163 TMEM151AQ8N4L1 468 aa15.33■□□□□ 0.04
PDGFB-201ENST00000331163 ATOH1Q92858 354 aaPredicted RBP15.33■□□□□ 0.04
PDGFB-201ENST00000331163 CCDC138Q96M89 665 aa15.33■□□□□ 0.04
PDGFB-201ENST00000331163 TMEM74Q96NL1 305 aa15.33■□□□□ 0.04
PDGFB-201ENST00000331163 FRG2BQ96QU4 278 aa15.33■□□□□ 0.04
PDGFB-201ENST00000331163 HRASLS2Q9NWW9 162 aa15.33■□□□□ 0.04
PDGFB-201ENST00000331163 MKS1Q9NXB0 559 aa15.33■□□□□ 0.04
PDGFB-201ENST00000331163 SELENONQ9NZV5 590 aa15.33■□□□□ 0.04
PDGFB-201ENST00000331163 VPS4AQ9UN37 437 aa15.33■□□□□ 0.04
PDGFB-201ENST00000331163 CASQ2O14958 399 aaPredicted RBP15.33■□□□□ 0.04
PDGFB-201ENST00000331163 SPINT1O43278 529 aa15.33■□□□□ 0.04
PDGFB-201ENST00000331163 ANXA4P09525 319 aaPredicted RBP15.33■□□□□ 0.04
PDGFB-201ENST00000331163 CKMT2P17540 419 aa15.33■□□□□ 0.04
PDGFB-201ENST00000331163 CDH2P19022 906 aaPredicted RBP15.33■□□□□ 0.04
PDGFB-201ENST00000331163 ALAS2P22557 587 aa15.33■□□□□ 0.04
PDGFB-201ENST00000331163 STX5Q13190 355 aa15.33■□□□□ 0.04
PDGFB-201ENST00000331163 TUBB3Q13509 450 aa15.33■□□□□ 0.04
PDGFB-201ENST00000331163 XKR5Q6UX68 686 aa15.33■□□□□ 0.04
PDGFB-201ENST00000331163 PCYOX1LQ8NBM8 494 aa15.33■□□□□ 0.04
PDGFB-201ENST00000331163 OR52E6Q96RD3 313 aa15.33■□□□□ 0.04
PDGFB-201ENST00000331163 COQ10BQ9H8M1 238 aa15.33■□□□□ 0.04
PDGFB-201ENST00000331163 SCN2AQ99250 2005 aa15.33■□□□□ 0.04
PDGFB-201ENST00000331163 PI15O43692 258 aa15.32■□□□□ 0.04
PDGFB-201ENST00000331163 SLC22A3O75751 556 aa15.32■□□□□ 0.04
PDGFB-201ENST00000331163 MYCLP1P12525 358 aaPredicted RBP15.32■□□□□ 0.04
PDGFB-201ENST00000331163 SSR2P43308 183 aa15.32■□□□□ 0.04
PDGFB-201ENST00000331163 MAGEA12P43365 314 aa15.32■□□□□ 0.04
PDGFB-201ENST00000331163 MTTPP55157 894 aa15.32■□□□□ 0.04
PDGFB-201ENST00000331163 MAZP56270 477 aaKnown RBP15.32■□□□□ 0.04
PDGFB-201ENST00000331163 ID2Q02363 134 aa15.32■□□□□ 0.04
PDGFB-201ENST00000331163 FRG1Q14331 258 aaKnown RBP15.32■□□□□ 0.04
PDGFB-201ENST00000331163 PCBP2Q15366 365 aaKnown RBP eCLIP15.32■□□□□ 0.04
PDGFB-201ENST00000331163 TJAP1Q5JTD0 557 aa15.32■□□□□ 0.04
PDGFB-201ENST00000331163 OGFRL1Q5TC84 451 aaPredicted RBP15.32■□□□□ 0.04
PDGFB-201ENST00000331163 LRTOMTQ8WZ04 291 aa15.32■□□□□ 0.04
PDGFB-201ENST00000331163 F2RL3Q96RI0 385 aa15.32■□□□□ 0.04
PDGFB-201ENST00000331163 DPH7Q9BTV6 452 aa15.32■□□□□ 0.04
PDGFB-201ENST00000331163 SLC12A9Q9BXP2 914 aa15.32■□□□□ 0.04
PDGFB-201ENST00000331163 GMPR2Q9P2T1 348 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms