RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 ATP6V1C2Q8NEY4 427 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 GPR156Q8NFN8 814 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 SLC38A3Q99624 504 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 RAB33BQ9H082 229 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 SLC40A1Q9NP59 571 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 CCDC177Q9NQR7 707 aaPredicted RBP8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 ZNF624Q9P2J8 865 aaPredicted RBP8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 GPN3Q9UHW5 284 aaPredicted RBP8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 ENTPD2Q9Y5L3 495 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 GMNCA6NCL1 334 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 WDR47O94967 919 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 OTCP00480 354 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 SERPINB1P30740 379 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 CLNS1AP54105 237 aaKnown RBP8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 SKP1P63208 163 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 CLCQ05315 142 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 LAPTM5Q13571 262 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 ZSCAN26Q16670 478 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 MLIPQ5VWP3 458 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 KANK2Q63ZY3 851 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 SLC30A9Q6PML9 568 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 SAP25Q8TEE9 199 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 AGAP11Q8TF27 550 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 SMPDL3AQ92484 453 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 SLC22A18Q96BI1 424 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 GBP5Q96PP8 586 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 SORT1Q99523 831 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 CNPPD1Q9BV87 410 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 OSBPL10Q9BXB5 764 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 RASSF4Q9H2L5 321 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 PCDHB11Q9Y5F2 797 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 USH1CQ9Y6N9 552 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 DOCK9Q9BZ29 2069 aa8.14□□□□□ -1.11
PTPDC1-201ENST00000288976 NOBOXO60393 691 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 EBLN1P0CF75 366 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 AK4P27144 223 aaPredicted RBP8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 ITPKBP27987 946 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 GSTM2P28161 218 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 CYP4F2P78329 520 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 PRRT3Q5FWE3 981 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 LUZP2Q86TE4 346 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 NAGSQ8N159 534 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 ZNF480Q8WV37 535 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 CPNE7Q9UBL6 633 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 ICKQ9UPZ9 632 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 FAM208BQ5VWN6 2430 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 YY2O15391 372 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 MPLP40238 635 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 NBL1P41271 181 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 GPR3P46089 330 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 KIR2DS3Q14952 304 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 SLC5A12Q1EHB4 618 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 C14orf28Q4W4Y0 310 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 LIPJQ5W064 366 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 ATG9BQ674R7 924 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 ZCCHC8Q6NZY4 707 aaKnown RBP8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 RNF44Q7L0R7 432 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 DSELQ8IZU8 1212 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 LSMEM2Q8N112 164 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 IL22RA1Q8N6P7 574 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 L3MBTL4Q8NA19 623 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 OR52E1Q8NGJ3 308 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 CEP19Q96LK0 163 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 LRFN3Q9BTN0 628 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 NT5DC2Q9H857 520 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 TCP11X1B4DZS4 312 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 RELAQ04206 551 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 BIKQ13323 160 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 SLC14A1Q13336 389 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 HLA-BQ31612 363 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 THOC6Q86W42 341 aaKnown RBP8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 PRSS33Q8NF86 280 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 OR4C6Q8NH72 309 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 CCL4L1Q8NHW4 92 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 TRPC4APQ8TEL6 797 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 ILKAPQ9H0C8 392 aaPredicted RBP8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 PRICKLE3O43900 615 aaPredicted RBP8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 DCTN3O75935 186 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 SLC16A8O95907 504 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 FAM107AO95990 144 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 RPL10P27635 214 aaKnown RBP8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 NOS3P29474 1203 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 GSSP48637 474 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 TBPL1P62380 186 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 KLHL35Q6PF15 583 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 DBX2Q6ZNG2 339 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 KCT2Q8NC54 265 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 SMPDL3BQ92485 455 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 DPYSL5Q9BPU6 564 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 RIC8BQ9NVN3 520 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 PCDHGA4Q9Y5G9 962 aa8.13□□□□□ -1.11
PTPDC1-201ENST00000288976 KHNYNO15037 678 aaKnown RBP8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 ZNF806P0C7X5 589 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 CPA2P48052 419 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 RPL14P50914 215 aaKnown RBP8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 NAGLUP54802 743 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 TCF15Q12870 199 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 SUZ12Q15022 739 aaKnown RBP8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 SMU1Q2TAY7 513 aa8.12□□□□□ -1.11
PTPDC1-201ENST00000288976 CES4AQ5XG92 561 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms