RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 C2P06681 752 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 CAPN3P20807 821 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 SLC3A1Q07837 685 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 SYT16Q17RD7 645 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 KLHDC10Q6PID8 442 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 PRSS58Q8IYP2 241 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 SPPL2BQ8TCT7 592 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 STON2Q8WXE9 905 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 COPS5Q92905 334 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 EBF3Q9H4W6 596 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 RNF6Q9Y252 685 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 DNMT3AQ9Y6K1 912 aaPredicted RBP8.51□□□□□ -1.05
NIPBL-201ENST00000282516 IQGAP1P46940 1657 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 SH3PXD2BA1X283 911 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 TMEM150BA6NC51 233 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 C1orf196B1AJZ1 125 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 TSPAN15O95858 294 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 FNTBP49356 437 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 ERVK-8P63133 956 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 SLC9A9Q8IVB4 645 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 KCT2Q8NC54 265 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 HCN2Q9UL51 889 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 C2orf92A0A1B0GVN3 265 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 EIF1AYO14602 144 aaKnown RBP8.51□□□□□ -1.05
NIPBL-201ENST00000282516 TRAPPC6AO75865 159 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 EIF1AXP47813 144 aaKnown RBP8.51□□□□□ -1.05
NIPBL-201ENST00000282516 RFX5P48382 616 aaPredicted RBP8.51□□□□□ -1.05
NIPBL-201ENST00000282516 PLA2G16P53816 162 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 ARL13AQ5H913 290 aaPredicted RBP8.51□□□□□ -1.05
NIPBL-201ENST00000282516 HID1Q8IV36 788 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 CASTOR1Q8WTX7 329 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 RTFDC1Q9BY42 306 aaPredicted RBP8.51□□□□□ -1.05
NIPBL-201ENST00000282516 COPZ2Q9P299 210 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 TMED5Q9Y3A6 229 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 CNTNAP1P78357 1384 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 PIP5K1BO14986 540 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 POLR1CO15160 346 aaPredicted RBP8.51□□□□□ -1.05
NIPBL-201ENST00000282516 PI15O43692 258 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 MT-ND2P03891 347 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 PTPRAP18433 802 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 LAG3P18627 525 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 SH3PXD2AQ5TCZ1 1133 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 OR2T5Q6IEZ7 315 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 PLPPR4Q7Z2D5 763 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 AMZ2Q86W34 360 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 OR2T29Q8NH02 315 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 PTPN18Q99952 460 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 SLC29A3Q9BZD2 475 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 CDKN2CP42773 168 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 EEFSECP57772 596 aaKnown RBP8.51□□□□□ -1.05
NIPBL-201ENST00000282516 PIAS4Q8N2W9 510 aaPredicted RBP8.51□□□□□ -1.05
NIPBL-201ENST00000282516 SMG8Q8ND04 991 aaKnown RBP8.51□□□□□ -1.05
NIPBL-201ENST00000282516 SLC16A10Q8TF71 515 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 IRGQQ8WZA9 623 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 SPOCK2Q92563 424 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 IL4I1Q96RQ9 567 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 MRM3Q9HC36 420 aaKnown RBP8.51□□□□□ -1.05
NIPBL-201ENST00000282516 DUS2Q9NX74 493 aaKnown RBP8.51□□□□□ -1.05
NIPBL-201ENST00000282516 GRHPRQ9UBQ7 328 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 SLC7A11Q9UPY5 501 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 NCOA3Q9Y6Q9 1424 aa8.51□□□□□ -1.05
NIPBL-201ENST00000282516 J3QLW9 94 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 ZNF19P17023 458 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 FADDQ13158 208 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 DAG1Q14118 895 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 CFAP52Q8N1V2 620 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 FAM86B1Q8N7N1 296 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 CSPG4P5Q96PW8 444 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 POTEKPQ9BYX7 375 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 OR2B2Q9GZK3 357 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 METTL7AQ9H8H3 244 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 ZNF701Q9NV72 531 aaPredicted RBP8.5□□□□□ -1.05
NIPBL-201ENST00000282516 MUSKO15146 869 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 MFSD11O43934 449 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 INMTO95050 263 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 TGM6O95932 706 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 GABRR2P28476 465 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 BMP8BP34820 402 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 RORAP35398 523 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 CRYBB1P53674 252 aaPredicted RBP8.5□□□□□ -1.05
NIPBL-201ENST00000282516 MTPNP58546 118 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 RPL7AP62424 266 aaKnown RBP8.5□□□□□ -1.05
NIPBL-201ENST00000282516 NPTX1Q15818 432 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 GET4Q7L5D6 327 aaPredicted RBP8.5□□□□□ -1.05
NIPBL-201ENST00000282516 BMP8AQ7Z5Y6 402 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 NUS1Q96E22 293 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 DUSP9Q99956 384 aaKnown RBP8.5□□□□□ -1.05
NIPBL-201ENST00000282516 FARS2O95363 451 aaKnown RBP8.5□□□□□ -1.05
NIPBL-201ENST00000282516 MYCLP1P12525 358 aaPredicted RBP8.5□□□□□ -1.05
NIPBL-201ENST00000282516 AMY2BP19961 511 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 DSTNP60981 165 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 ZNF616Q08AN1 781 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 NKAPLQ5M9Q1 402 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 SLC22A16Q86VW1 577 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 C12orf65Q9H3J6 166 aaKnown RBP8.5□□□□□ -1.05
NIPBL-201ENST00000282516 ZFP57Q9NU63 452 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 TMEM100Q9NV29 134 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 ZNF225Q9UK10 706 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 PCDHB11Q9Y5F2 797 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 SHOXO15266 292 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms