RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 LGI1O95970 557 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 ADAP00813 363 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 HEXAP06865 529 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 HOXC6P09630 235 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 HKR1P10072 659 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 IRF1P10914 325 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 CYP4B1P13584 511 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 RPA2P15927 270 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 ZNF24P17028 368 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 CD72P21854 359 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 SLC6A2P23975 617 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 POU1F1P28069 291 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 HOXD9P28356 352 aaPredicted RBP4.42□□□□□ -1.7
CD44-202ENST00000278385 AKT2P31751 481 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 CSTF2P33240 577 aaKnown RBP eCLIP4.42□□□□□ -1.7
CD44-202ENST00000278385 HTR2BP41595 481 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 HAAOP46952 286 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 SLC6A12P48065 614 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 PXNP49023 591 aaPredicted RBP4.42□□□□□ -1.7
CD44-202ENST00000278385 HNRNPFP52597 415 aaKnown RBP4.42□□□□□ -1.7
CD44-202ENST00000278385 ZNF134P52741 427 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 TAS2R50P59544 299 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 CXADRP78310 365 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 NUCB2P80303 420 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 MRPS15P82914 257 aaKnown RBP4.42□□□□□ -1.7
CD44-202ENST00000278385 B4GALNT1Q00973 533 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 FPGSQ05932 587 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 DPTQ07507 201 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 MAB21L1Q13394 359 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 CCNIQ14094 377 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 IL13RA2Q14627 380 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 DECR1Q16698 335 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 GPAT3Q53EU6 434 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 TMEM41BQ5BJD5 291 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 C9orf50Q5SZB4 431 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 CERCAMQ5T4B2 595 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 MFSD14CQ5VZR4 134 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 KCTD11Q693B1 232 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 C8orf74Q6P047 294 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 PODNL1Q6PEZ8 512 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 DEGS2Q6QHC5 323 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 C16orf89Q6UX73 402 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.42□□□□□ -1.7
CD44-202ENST00000278385 SEPT14Q6ZU15 432 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 EFL1Q7Z2Z2 1120 aaKnown RBP4.42□□□□□ -1.7
CD44-202ENST00000278385 TRIM74Q86UV6 250 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 TRIM73Q86UV7 250 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 FAM228AQ86W67 206 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 NRROSQ86YC3 692 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 ARHGEF19Q8IW93 802 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 HACE1Q8IYU2 909 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 RNF148Q8N7C7 305 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 AMER2Q8N7J2 671 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 CMASQ8NFW8 434 aaPredicted RBP4.42□□□□□ -1.7
CD44-202ENST00000278385 CLHC1Q8NHS4 586 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 B4GALNT2Q8NHY0 566 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 RAB3IL1Q8TBN0 382 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 C16orf58Q96GQ5 468 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 SLC41A3Q96GZ6 507 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 FAM71F1Q96KD3 344 aaPredicted RBP4.42□□□□□ -1.7
CD44-202ENST00000278385 LRFN5Q96NI6 719 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 DEFB118Q96PH6 123 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 HAPLN3Q96S86 360 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 ZSWIM1Q9BR11 485 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 TRIM62Q9BVG3 475 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 EGLN1Q9GZT9 426 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 SPATC1LQ9H0A9 340 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 NAPBQ9H115 298 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 PORCNQ9H237 461 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 HIPK3Q9H422 1215 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 PLEKHA4Q9H4M7 779 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 KCNMB3Q9NPA1 279 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 NUDT15Q9NV35 164 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 MTMR10Q9NXD2 777 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 KLHL28Q9NXS3 571 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 ETAA1Q9NY74 926 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 ANKFY1Q9P2R3 1169 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 HBS1LQ9Y450 684 aaKnown RBP4.42□□□□□ -1.7
CD44-202ENST00000278385 MYH2Q9UKX2 1941 aa4.42□□□□□ -1.7
CD44-202ENST00000278385 A0A087X1B8 175 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 A0A0B4J293 547 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 C17orf102A2RUQ5 167 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 MYADML2A6NDP7 307 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 UNC119BA6NIH7 251 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 C17orf100A8MU93 164 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.41□□□□□ -1.7
CD44-202ENST00000278385 F5H6K3 240 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 SMIM22K7EJ46 135 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 KRT86O43790 486 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 DNAJB6O75190 326 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 TRIM3O75382 744 aaPredicted RBP4.41□□□□□ -1.7
CD44-202ENST00000278385 CSDE1O75534 798 aaKnown RBP4.41□□□□□ -1.7
CD44-202ENST00000278385 TTLL1O95922 423 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 CRYGCP07315 174 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 FHP07954 510 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 HOXB5P09067 269 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 ITGAMP11215 1152 aa4.41□□□□□ -1.7
CD44-202ENST00000278385 DDX5P17844 614 aaKnown RBP4.41□□□□□ -1.7
CD44-202ENST00000278385 IGFBP2P18065 325 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms