RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 IL6P05231 212 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 ME2P23368 584 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 PEBP1P30086 187 aaKnown RBP15.73■□□□□ 0.11
TPM1-201ENST00000267996 SHMT2P34897 504 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 DGKQP52824 942 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 CLNS1AP54105 237 aaKnown RBP15.73■□□□□ 0.11
TPM1-201ENST00000267996 RAE1P78406 368 aaKnown RBP15.73■□□□□ 0.11
TPM1-201ENST00000267996 ACSM2AQ08AH3 577 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 SPIN4Q56A73 249 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 ACSM2BQ68CK6 577 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 IQCHQ86VS3 1027 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 PARGQ86W56 976 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 KRTCAP2Q8N6L1 136 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 NUDT8Q8WV74 236 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 CAAP1Q9H8G2 361 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 RNPEPL1Q9HAU8 725 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 AASDHPPTQ9NRN7 309 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 TAAR2Q9P1P5 351 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 CD300AQ9UGN4 299 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 HEATR5BQ9P2D3 2071 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 GON4LQ3T8J9 2241 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 IGKV1-8A0A0C4DH67 115 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 TRIM38O00635 465 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 AXIN1O15169 862 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 DCNP07585 359 aaKnown RBP15.73■□□□□ 0.11
TPM1-201ENST00000267996 SERPINB1P30740 379 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 BLKP51451 505 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 CSNK1G2P78368 415 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 PHEXP78562 749 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 ABATP80404 500 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 TCEA2Q15560 299 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 SLC36A4Q6YBV0 504 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 PRR23BQ6ZRT6 265 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 PHACTR4Q8IZ21 702 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 C1orf52Q8N6N3 182 aaKnown RBP15.73■□□□□ 0.11
TPM1-201ENST00000267996 ENDOVQ8N8Q3 282 aaKnown RBP15.73■□□□□ 0.11
TPM1-201ENST00000267996 TESCQ96BS2 214 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 CCDC124Q96CT7 223 aaKnown RBP15.73■□□□□ 0.11
TPM1-201ENST00000267996 CXorf40BQ96DE9 158 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 TSSK3Q96PN8 268 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 SLC39A3Q9BRY0 314 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 DCLRE1BQ9H816 532 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 ADA2Q9NZK5 511 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 PACSIN3Q9UKS6 424 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 INVSQ9Y283 1065 aa15.73■□□□□ 0.11
TPM1-201ENST00000267996 H7BY64 318 aa15.72■□□□□ 0.11
TPM1-201ENST00000267996 MYO1DO94832 1006 aa15.72■□□□□ 0.11
TPM1-201ENST00000267996 XRCC1P18887 633 aaPredicted RBP15.72■□□□□ 0.11
TPM1-201ENST00000267996 SLC6A2P23975 617 aa15.72■□□□□ 0.11
TPM1-201ENST00000267996 PTX3P26022 381 aaPredicted RBP15.72■□□□□ 0.11
TPM1-201ENST00000267996 CD38P28907 300 aa15.72■□□□□ 0.11
TPM1-201ENST00000267996 RACK1P63244 317 aaKnown RBP15.72■□□□□ 0.11
TPM1-201ENST00000267996 NFYCQ13952 458 aa15.72■□□□□ 0.11
TPM1-201ENST00000267996 CCNIQ14094 377 aa15.72■□□□□ 0.11
TPM1-201ENST00000267996 FAM174BQ3ZCQ3 159 aa15.72■□□□□ 0.11
TPM1-201ENST00000267996 SPANXN4Q5MJ08 99 aa15.72■□□□□ 0.11
TPM1-201ENST00000267996 SAMD4BQ5PRF9 694 aaKnown RBP15.72■□□□□ 0.11
TPM1-201ENST00000267996 SLC2A7Q6PXP3 512 aa15.72■□□□□ 0.11
TPM1-201ENST00000267996 DLEU7Q6UYE1 221 aa15.72■□□□□ 0.11
TPM1-201ENST00000267996 ARMCX6Q7L4S7 300 aa15.72■□□□□ 0.11
TPM1-201ENST00000267996 AMIGO1Q86WK6 493 aa15.72■□□□□ 0.11
TPM1-201ENST00000267996 SLC15A3Q8IY34 581 aa15.72■□□□□ 0.11
TPM1-201ENST00000267996 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.72■□□□□ 0.11
TPM1-201ENST00000267996 DEFB119Q8N690 84 aa15.72■□□□□ 0.11
TPM1-201ENST00000267996 CLHC1Q8NHS4 586 aa15.72■□□□□ 0.11
TPM1-201ENST00000267996 C1orf216Q8TAB5 229 aa15.72■□□□□ 0.11
TPM1-201ENST00000267996 SLC13A3Q8WWT9 602 aa15.72■□□□□ 0.11
TPM1-201ENST00000267996 LCN9Q8WX39 176 aa15.72■□□□□ 0.11
TPM1-201ENST00000267996 EGLN2Q96KS0 407 aa15.72■□□□□ 0.11
TPM1-201ENST00000267996 PRAP1Q96NZ9 151 aa15.72■□□□□ 0.11
TPM1-201ENST00000267996 SPHK1Q9NYA1 384 aa15.72■□□□□ 0.11
TPM1-201ENST00000267996 DLGAP2Q9P1A6 1054 aa15.72■□□□□ 0.11
TPM1-201ENST00000267996 KNL1Q8NG31 2342 aa15.72■□□□□ 0.11
TPM1-201ENST00000267996 PRORSD1PA6NEY8 169 aa15.71■□□□□ 0.11
TPM1-201ENST00000267996 OR5K4A6NMS3 321 aa15.71■□□□□ 0.11
TPM1-201ENST00000267996 MAP3K7O43318 606 aa15.71■□□□□ 0.11
TPM1-201ENST00000267996 TBX6O95947 436 aaPredicted RBP15.71■□□□□ 0.11
TPM1-201ENST00000267996 PGRP06401 933 aa15.71■□□□□ 0.11
TPM1-201ENST00000267996 CHRM5P08912 532 aaPredicted RBP15.71■□□□□ 0.11
TPM1-201ENST00000267996 PRPS1L1P21108 318 aa15.71■□□□□ 0.11
TPM1-201ENST00000267996 HOXA6P31267 233 aa15.71■□□□□ 0.11
TPM1-201ENST00000267996 TIA1P31483 386 aaKnown RBP eCLIP15.71■□□□□ 0.115e-8■□□□□ 8.7
TPM1-201ENST00000267996 SLC7A2P52569 658 aa15.71■□□□□ 0.11
TPM1-201ENST00000267996 UBE2IP63279 158 aaKnown RBP15.71■□□□□ 0.11
TPM1-201ENST00000267996 RPL6Q02878 288 aaKnown RBP15.71■□□□□ 0.11
TPM1-201ENST00000267996 RBBP5Q15291 538 aaKnown RBP15.71■□□□□ 0.11
TPM1-201ENST00000267996 SPATS1Q496A3 300 aa15.71■□□□□ 0.11
TPM1-201ENST00000267996 ZNF542PQ5EBM4 170 aa15.71■□□□□ 0.11
TPM1-201ENST00000267996 METTL4Q8N3J2 472 aa15.71■□□□□ 0.11
TPM1-201ENST00000267996 ANKRD53Q8N9V6 530 aa15.71■□□□□ 0.11
TPM1-201ENST00000267996 SPACA7Q96KW9 195 aa15.71■□□□□ 0.11
TPM1-201ENST00000267996 EBPLQ9BY08 206 aa15.71■□□□□ 0.11
TPM1-201ENST00000267996 ZMYND15Q9H091 742 aa15.71■□□□□ 0.11
TPM1-201ENST00000267996 IL1RL2Q9HB29 575 aa15.71■□□□□ 0.11
TPM1-201ENST00000267996 CD320Q9NPF0 282 aa15.71■□□□□ 0.11
TPM1-201ENST00000267996 SUCOQ9UBS9 1254 aaKnown RBP15.71■□□□□ 0.11
TPM1-201ENST00000267996 PCDHA9Q9Y5H5 950 aa15.71■□□□□ 0.11
TPM1-201ENST00000267996 KIR2DS5A0A0G2JLQ3 304 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 A0A0G2JNG1 304 aa15.7■□□□□ 0.1
TPM1-201ENST00000267996 KIR2DS3K7RE56 304 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms