RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 PAQR7Q86WK9 346 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 SLC7A5P1Q8MH63 180 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 FIBCD1Q8N539 461 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 NIPA2Q8N8Q9 360 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 TXNDC5Q8NBS9 432 aaKnown RBP11.74□□□□□ -0.53
SMG6-201ENST00000263073 RASSF5Q8WWW0 418 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 ITFG2Q969R8 447 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 DPEP2Q9H4A9 486 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 MGAT4AQ9UM21 535 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 POFUT2Q9Y2G5 429 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 NOP16Q9Y3C1 178 aaKnown RBP11.74□□□□□ -0.53
SMG6-201ENST00000263073 PCDHGA11Q9Y5H2 935 aa11.74□□□□□ -0.53
SMG6-201ENST00000263073 FAM170BA6NMN3 283 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 C6orf47O95873 294 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 GNAZP19086 355 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 NSG1P42857 185 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 SLC9A3P48764 834 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 ARFRP1Q13795 201 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 ZMYND11Q15326 602 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 ABCA11PQ4W5N1 156 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 METTL3Q86U44 580 aaKnown RBP11.73□□□□□ -0.53
SMG6-201ENST00000263073 SDR16C5Q8N3Y7 309 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 TMEM151AQ8N4L1 468 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 IRGQQ8WZA9 623 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 ALPK1Q96QP1 1244 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 FARSBQ9NSD9 589 aaKnown RBP11.73□□□□□ -0.53
SMG6-201ENST00000263073 CDH7Q9ULB5 785 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 ADH1CP00326 375 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 H1F0P07305 194 aaKnown RBP11.73□□□□□ -0.53
SMG6-201ENST00000263073 HOXB6P17509 224 aaKnown RBP11.73□□□□□ -0.53
SMG6-201ENST00000263073 OGNP20774 298 aaKnown RBP11.73□□□□□ -0.53
SMG6-201ENST00000263073 RPL10P27635 214 aaKnown RBP11.73□□□□□ -0.53
SMG6-201ENST00000263073 ADH7P40394 386 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 GRK1Q15835 563 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 DUOXA1Q1HG43 343 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 VARS2Q5ST30 1063 aaKnown RBP11.73□□□□□ -0.53
SMG6-201ENST00000263073 CEACAM20Q6UY09 585 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 ZNF675Q8TD23 568 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 CD300LFQ8TDQ1 290 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 SLC7A6OSQ96CW6 309 aaPredicted RBP11.73□□□□□ -0.53
SMG6-201ENST00000263073 CDKN2AIPNLQ96HQ2 116 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 CNDP2Q96KP4 475 aaKnown RBP11.73□□□□□ -0.53
SMG6-201ENST00000263073 ZNF717Q9BY31 904 aaPredicted RBP11.73□□□□□ -0.53
SMG6-201ENST00000263073 UCK2Q9BZX2 261 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 ILVBLA1L0T0 632 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 SSX5O60225 188 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 CLDN7O95471 211 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 ALPPL2P10696 532 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 GKP32189 559 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 PIAS4Q8N2W9 510 aaPredicted RBP11.73□□□□□ -0.53
SMG6-201ENST00000263073 JAGN1Q8N5M9 183 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 SPPL2BQ8TCT7 592 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 CYB5D2Q8WUJ1 264 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 THEM6Q8WUY1 208 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 RAB8BQ92930 207 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 FCRL3Q96P31 734 aaPredicted RBP11.73□□□□□ -0.53
SMG6-201ENST00000263073 FCRL5Q96RD9 977 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 MRPS30Q9NP92 439 aaKnown RBP11.73□□□□□ -0.53
SMG6-201ENST00000263073 PHPT1Q9NRX4 125 aaPredicted RBP11.73□□□□□ -0.53
SMG6-201ENST00000263073 SOWAHBA6NEL2 793 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 SLC38A8A6NNN8 435 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 GRXCR1A8MXD5 290 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 PLATP00750 562 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 SMPD1P17405 629 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 TIGD5Q53EQ6 642 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 OXR1Q8N573 874 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 TMIGD2Q96BF3 282 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 ZBED6CLQ96FA7 236 aaPredicted RBP11.73□□□□□ -0.53
SMG6-201ENST00000263073 TMEM246Q9BRR3 403 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 ZNF700Q9H0M5 742 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 MAGEH1Q9H213 219 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 TP63Q9H3D4 680 aaPredicted RBP11.73□□□□□ -0.53
SMG6-201ENST00000263073 ATRNL1Q5VV63 1379 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 ZNF878C9JN71 531 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 GABRDO14764 452 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 TYROBPO43914 113 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 SLC35G6P0C7Q6 338 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 CD72P21854 359 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 YBEYP58557 167 aaPredicted RBP11.73□□□□□ -0.53
SMG6-201ENST00000263073 CCDC58Q4VC31 144 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 ATAT1Q5SQI0 421 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 XKRXQ6PP77 449 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 VTCN1Q7Z7D3 282 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 RNF130Q86XS8 419 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 OR4K1Q8NGD4 311 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 OR2L2Q8NH16 312 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 PLEKHO2Q8TD55 490 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 HEPHQ9BQS7 1158 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 AIFM2Q9BRQ8 373 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 OR51B5Q9H339 312 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 CCSER2Q9H7U1 834 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 RC3H2Q9HBD1 1191 aaKnown RBP11.73□□□□□ -0.53
SMG6-201ENST00000263073 VNN3Q9NY84 501 aa11.73□□□□□ -0.53
SMG6-201ENST00000263073 ZNF208O43345 1280 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 PCDHGA12O60330 932 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 ZNF3P17036 446 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 AFF1P51825 1210 aaKnown RBP11.72□□□□□ -0.53
SMG6-201ENST00000263073 ARSFP54793 590 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 FKBP1CQ5VVH2 108 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 TUBA3EQ6PEY2 450 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms