RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 KRR1Q13601 381 aaKnown RBP19.92■□□□□ 0.78
SNX3-201ENST00000230085 GBX1Q14549 363 aa19.92■□□□□ 0.78
SNX3-201ENST00000230085 ABRAXAS2Q15018 415 aa19.92■□□□□ 0.78
SNX3-201ENST00000230085 PROX2Q3B8N5 592 aa19.92■□□□□ 0.78
SNX3-201ENST00000230085 PRR23CQ6ZRP0 262 aa19.92■□□□□ 0.78
SNX3-201ENST00000230085 GLT6D1Q7Z4J2 308 aa19.92■□□□□ 0.78
SNX3-201ENST00000230085 CYP4Z1Q86W10 505 aa19.92■□□□□ 0.78
SNX3-201ENST00000230085 CSGALNACT1Q8TDX6 532 aa19.92■□□□□ 0.78
SNX3-201ENST00000230085 GLMNQ92990 594 aa19.92■□□□□ 0.78
SNX3-201ENST00000230085 LGALS12Q96DT0 336 aa19.92■□□□□ 0.78
SNX3-201ENST00000230085 TRPV5Q9NQA5 729 aa19.92■□□□□ 0.78
SNX3-201ENST00000230085 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.92■□□□□ 0.78
SNX3-201ENST00000230085 TSC22D4Q9Y3Q8 395 aa19.92■□□□□ 0.78
SNX3-201ENST00000230085 TESMINQ9Y4I5 508 aa19.92■□□□□ 0.78
SNX3-201ENST00000230085 ZNF106Q9H2Y7 1883 aaKnown RBP19.91■□□□□ 0.78
SNX3-201ENST00000230085 TTC28Q96AY4 2481 aa19.91■□□□□ 0.78
SNX3-201ENST00000230085 GFRA2O00451 464 aa19.91■□□□□ 0.78
SNX3-201ENST00000230085 SEC22BO75396 215 aa19.91■□□□□ 0.78
SNX3-201ENST00000230085 SNX4O95219 450 aa19.91■□□□□ 0.78
SNX3-201ENST00000230085 CCNDBP1O95273 360 aa19.91■□□□□ 0.78
SNX3-201ENST00000230085 OXSR1O95747 527 aaPredicted RBP19.91■□□□□ 0.78
SNX3-201ENST00000230085 GSNP06396 782 aa19.91■□□□□ 0.78
SNX3-201ENST00000230085 TACR2P21452 398 aa19.91■□□□□ 0.78
SNX3-201ENST00000230085 SOX9P48436 509 aa19.91■□□□□ 0.78
SNX3-201ENST00000230085 IL5RAQ01344 420 aa19.91■□□□□ 0.78
SNX3-201ENST00000230085 MAD2L1BPQ15013 274 aaPredicted RBP19.91■□□□□ 0.78
SNX3-201ENST00000230085 ITPRIPL2Q3MIP1 535 aa19.91■□□□□ 0.78
SNX3-201ENST00000230085 FAM174BQ3ZCQ3 159 aa19.91■□□□□ 0.78
SNX3-201ENST00000230085 ZNF362Q5T0B9 420 aaPredicted RBP19.91■□□□□ 0.78
SNX3-201ENST00000230085 CACHD1Q5VU97 1274 aa19.91■□□□□ 0.78
SNX3-201ENST00000230085 CPA6Q8N4T0 437 aa19.91■□□□□ 0.78
SNX3-201ENST00000230085 SIDT2Q8NBJ9 832 aaKnown RBP19.91■□□□□ 0.78
SNX3-201ENST00000230085 CNIH3Q8TBE1 160 aa19.91■□□□□ 0.78
SNX3-201ENST00000230085 NTMT1Q9BV86 223 aa19.91■□□□□ 0.78
SNX3-201ENST00000230085 SLC29A3Q9BZD2 475 aa19.91■□□□□ 0.78
SNX3-201ENST00000230085 DPY30Q9C005 99 aa19.91■□□□□ 0.78
SNX3-201ENST00000230085 IL1RAPQ9NPH3 570 aa19.91■□□□□ 0.78
SNX3-201ENST00000230085 PKP3Q9Y446 797 aa19.91■□□□□ 0.78
SNX3-201ENST00000230085 F5P12259 2224 aa19.91■□□□□ 0.78
SNX3-201ENST00000230085 PABPN1LA6NDY0 278 aaKnown RBP19.9■□□□□ 0.78
SNX3-201ENST00000230085 NCF1BA6NI72 391 aaPredicted RBP19.9■□□□□ 0.78
SNX3-201ENST00000230085 NCF1CA8MVU1 366 aaPredicted RBP19.9■□□□□ 0.78
SNX3-201ENST00000230085 NEDD8-MDP1E9PL57 170 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 RAD51BO15315 384 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 XPNPEP2O43895 674 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 NIPSNAP2O75323 286 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 MYO1DO94832 1006 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 SLC34A2O95436 690 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 PRLP01236 227 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 PRSS56P0CW18 603 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 NCF1P14598 390 aaPredicted RBP19.9■□□□□ 0.78
SNX3-201ENST00000230085 FPR1P21462 350 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 RPS3P23396 243 aaKnown RBP eCLIP19.9■□□□□ 0.78
SNX3-201ENST00000230085 PRPH2P23942 346 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 PTPN6P29350 595 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 SOX11P35716 441 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 GNPDA1P46926 289 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 CLK3P49761 638 aaKnown RBP19.9■□□□□ 0.78
SNX3-201ENST00000230085 IL31Q6EBC2 164 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 SLC22A16Q86VW1 577 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 LYSMD2Q8IV50 215 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 CFAP52Q8N1V2 620 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 MDGA1Q8NFP4 955 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 DNASE1L2Q92874 299 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 USP7Q93009 1102 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 SLC38A4Q969I6 547 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 CHFRQ96EP1 664 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 BBS2Q9BXC9 721 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 SERHLQ9NQF3 203 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 PLCXD1Q9NUJ7 323 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 FBXO10Q9UK96 956 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 METTL15A6NJ78 407 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 F5H5T6 163 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 H0Y626 953 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 TRIM16O95361 564 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 ADH1CP00326 375 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 MT-ND2P03891 347 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 S100BP04271 92 aaPredicted RBP19.9■□□□□ 0.78
SNX3-201ENST00000230085 ADH5P11766 374 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 GJA4P35212 333 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 ACVRL1P37023 503 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 ETV6P41212 452 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 RPS24P62847 133 aaKnown RBP19.9■□□□□ 0.78
SNX3-201ENST00000230085 ZNF45Q02386 682 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 PRKCDQ05655 676 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 GAB4Q2WGN9 574 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 PIANPQ8IYJ0 282 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 NAT16Q8N8M0 369 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 YIPF2Q9BWQ6 316 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 CCDC90BQ9GZT6 254 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 KLHL25Q9H0H3 589 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 UTS2RQ9UKP6 389 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 OARD1Q9Y530 152 aa19.9■□□□□ 0.78
SNX3-201ENST00000230085 INSIG1O15503 277 aa19.89■□□□□ 0.77
SNX3-201ENST00000230085 FTH1P02794 183 aa19.89■□□□□ 0.77
SNX3-201ENST00000230085 TYRP14679 529 aa19.89■□□□□ 0.77
SNX3-201ENST00000230085 OR1E1P30953 314 aa19.89■□□□□ 0.77
SNX3-201ENST00000230085 DNAJA1P31689 397 aaKnown RBP19.89■□□□□ 0.77
SNX3-201ENST00000230085 ARHGDIAP52565 204 aa19.89■□□□□ 0.77
SNX3-201ENST00000230085 LAPTM5Q13571 262 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms