RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 MAU2Q9Y6X3 613 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 SCN3AQ9NY46 2000 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 IGSF10Q6WRI0 2623 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 ASH1LQ9NR48 2969 aaKnown RBP12.1□□□□□ -0.47
LSM5-201ENST00000223084 A0A096LPK6 155 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 EXOC1LA0A1B0GW35 172 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 A0A1B0GX78 115 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 DSCR3O14972 297 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 TAPBPO15533 448 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 CNOT3O75175 753 aaKnown RBP12.1□□□□□ -0.47
LSM5-201ENST00000223084 WDR47O94967 919 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 ABHD2P08910 425 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 RAB40ALP0C0E4 278 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 PYGBP11216 843 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 HRH2P25021 359 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 GCAP28676 217 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 TYK2P29597 1187 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 BCL6P41182 706 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 OR1D4P47884 311 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 SERPINB8P50452 374 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 SERPINB9P50453 376 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 MC1RQ01726 317 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 IL10RAQ13651 578 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 SLC29A2Q14542 456 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 NCF4Q15080 339 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 DEFB109BQ30KR1 87 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 NKAIN1Q4KMZ8 207 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 NEIL2Q969S2 332 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 RERGQ96A58 199 aaPredicted RBP12.1□□□□□ -0.47
LSM5-201ENST00000223084 C10orf90Q96M02 699 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 UBL7Q96S82 380 aaPredicted RBP12.1□□□□□ -0.47
LSM5-201ENST00000223084 DPH2Q9BQC3 489 aaPredicted RBP12.1□□□□□ -0.47
LSM5-201ENST00000223084 TMEM79Q9BSE2 394 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 NLNQ9BYT8 704 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 VPS11Q9H270 941 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 SPNS1Q9H2V7 528 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 NMRAL1Q9HBL8 299 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 ENAMQ9NRM1 1142 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 WWOXQ9NZC7 414 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 CD274Q9NZQ7 290 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 IFT80Q9P2H3 777 aaPredicted RBP12.1□□□□□ -0.47
LSM5-201ENST00000223084 TLK1Q9UKI8 766 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 RUVBL1Q9Y265 456 aaKnown RBP12.1□□□□□ -0.47
LSM5-201ENST00000223084 DYRK1BQ9Y463 629 aa12.1□□□□□ -0.47
LSM5-201ENST00000223084 MED13Q9UHV7 2174 aa12.09□□□□□ -0.47
LSM5-201ENST00000223084 A0A087X1B8 175 aa12.09□□□□□ -0.47
LSM5-201ENST00000223084 SUPT3HB4E1H0 165 aa12.09□□□□□ -0.47
LSM5-201ENST00000223084 TRIM49D1C9J1S8 452 aa12.09□□□□□ -0.47
LSM5-201ENST00000223084 C9J4A7 227 aa12.09□□□□□ -0.47
LSM5-201ENST00000223084 ERVH48-1M5A8F1 160 aa12.09□□□□□ -0.47
LSM5-201ENST00000223084 UBXN8O00124 270 aa12.09□□□□□ -0.47
LSM5-201ENST00000223084 SUPT3HO75486 399 aa12.09□□□□□ -0.47
LSM5-201ENST00000223084 SLC6A12P48065 614 aa12.09□□□□□ -0.47
LSM5-201ENST00000223084 GLRBP48167 497 aa12.09□□□□□ -0.47
LSM5-201ENST00000223084 HSPA7P48741 367 aa12.09□□□□□ -0.47
LSM5-201ENST00000223084 HNMTP50135 292 aa12.09□□□□□ -0.47
LSM5-201ENST00000223084 CCR8P51685 355 aa12.09□□□□□ -0.47
LSM5-201ENST00000223084 RPS15AP62244 130 aaKnown RBP12.09□□□□□ -0.47
LSM5-201ENST00000223084 RELAQ04206 551 aa12.09□□□□□ -0.47
LSM5-201ENST00000223084 FAM214AQ32MH5 1076 aa12.09□□□□□ -0.47
LSM5-201ENST00000223084 SOWAHCQ53LP3 525 aaPredicted RBP12.09□□□□□ -0.47
LSM5-201ENST00000223084 TAF1BQ53T94 588 aaPredicted RBP12.09□□□□□ -0.47
LSM5-201ENST00000223084 YOD1Q5VVQ6 348 aaPredicted RBP12.09□□□□□ -0.47
LSM5-201ENST00000223084 COX15Q7KZN9 410 aa12.09□□□□□ -0.47
LSM5-201ENST00000223084 VN1R4Q7Z5H5 301 aa12.09□□□□□ -0.47
LSM5-201ENST00000223084 PLD6Q8N2A8 252 aaKnown RBP12.09□□□□□ -0.47
LSM5-201ENST00000223084 ZNF740Q8NDX6 193 aa12.09□□□□□ -0.47
LSM5-201ENST00000223084 ABHD11Q8NFV4 315 aa12.09□□□□□ -0.47
LSM5-201ENST00000223084 STAG3L4Q8TBR4 150 aa12.09□□□□□ -0.47
LSM5-201ENST00000223084 SLC5A11Q8WWX8 675 aa12.09□□□□□ -0.47
LSM5-201ENST00000223084 CABS1Q96KC9 395 aa12.09□□□□□ -0.47
LSM5-201ENST00000223084 ATOH8Q96SQ7 321 aa12.09□□□□□ -0.47
LSM5-201ENST00000223084 DHRS4Q9BTZ2 278 aa12.09□□□□□ -0.47
LSM5-201ENST00000223084 ZNF358Q9NW07 568 aa12.09□□□□□ -0.47
LSM5-201ENST00000223084 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.09□□□□□ -0.47
LSM5-201ENST00000223084 GPN3Q9UHW5 284 aaPredicted RBP12.09□□□□□ -0.47
LSM5-201ENST00000223084 TCFL5Q9UL49 500 aa12.09□□□□□ -0.47
LSM5-201ENST00000223084 MRPS2Q9Y399 296 aaKnown RBP12.09□□□□□ -0.47
LSM5-201ENST00000223084 ASB1Q9Y576 335 aa12.09□□□□□ -0.47
LSM5-201ENST00000223084 V9GYY5 206 aaPredicted RBP12.09□□□□□ -0.47
LSM5-201ENST00000223084 ATMQ13315 3056 aa12.09□□□□□ -0.47
LSM5-201ENST00000223084 PIEZO2Q9H5I5 2752 aa12.08□□□□□ -0.48
LSM5-201ENST00000223084 NAV2Q8IVL1 2488 aa12.08□□□□□ -0.48
LSM5-201ENST00000223084 ATXN7O15265 892 aaPredicted RBP12.08□□□□□ -0.48
LSM5-201ENST00000223084 KERAO60938 352 aa12.08□□□□□ -0.48
LSM5-201ENST00000223084 KRT38O76015 456 aa12.08□□□□□ -0.48
LSM5-201ENST00000223084 KLHL2O95198 593 aa12.08□□□□□ -0.48
LSM5-201ENST00000223084 SLU7O95391 586 aaKnown RBP12.08□□□□□ -0.48
LSM5-201ENST00000223084 S100BP04271 92 aaPredicted RBP12.08□□□□□ -0.48
LSM5-201ENST00000223084 VARSP26640 1264 aaKnown RBP12.08□□□□□ -0.48
LSM5-201ENST00000223084 TNFRSF8P28908 595 aa12.08□□□□□ -0.48
LSM5-201ENST00000223084 SLC26A3P40879 764 aa12.08□□□□□ -0.48
LSM5-201ENST00000223084 MAGEA12P43365 314 aa12.08□□□□□ -0.48
LSM5-201ENST00000223084 AGTR2P50052 363 aa12.08□□□□□ -0.48
LSM5-201ENST00000223084 LY6DQ14210 128 aa12.08□□□□□ -0.48
LSM5-201ENST00000223084 UGT8Q16880 541 aa12.08□□□□□ -0.48
LSM5-201ENST00000223084 MUM1Q2TAK8 710 aa12.08□□□□□ -0.48
LSM5-201ENST00000223084 SULT1C3Q6IMI6 304 aa12.08□□□□□ -0.48
LSM5-201ENST00000223084 MRPL14Q6P1L8 145 aaKnown RBP12.08□□□□□ -0.48
LSM5-201ENST00000223084 NXPE4Q6UWF7 544 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms