RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 FAM156AQ8NDB6 213 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 OR4F6Q8NGB9 312 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 LYARQ9NX58 379 aaKnown RBP18.41■□□□□ 0.54
SMPD3-201ENST00000219334 ZIM2Q9NZV7 527 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 PDE10AQ9Y233 779 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 KCTD3Q9Y597 815 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 ABCC6O95255 1503 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 TRMUO75648 421 aaKnown RBP18.41■□□□□ 0.54
SMPD3-201ENST00000219334 SCGNO76038 276 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 IL33O95760 270 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 SYT16Q17RD7 645 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 DUOXA1Q1HG43 343 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 IQCCQ4KMZ1 466 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 MMABQ96EY8 250 aaPredicted RBP18.41■□□□□ 0.54
SMPD3-201ENST00000219334 AKTIPQ9H8T0 292 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 MGAT4AQ9UM21 535 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 GPR34Q9UPC5 381 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 BTN3A3O00478 584 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 ZNF623O75123 536 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 PGLSO95336 258 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 RING1Q06587 406 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 BNIP1Q12981 228 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 KCNC3Q14003 757 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 EIF4HQ15056 248 aaKnown RBP18.41■□□□□ 0.54
SMPD3-201ENST00000219334 CLEC12AQ5QGZ9 265 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 PGBD2Q6P3X8 592 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 TRIM74Q86UV6 250 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 P2RY8Q86VZ1 359 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 PDE7BQ9NP56 450 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 CA14Q9ULX7 337 aa18.41■□□□□ 0.54
SMPD3-201ENST00000219334 H1F0P07305 194 aaKnown RBP18.4■□□□□ 0.54
SMPD3-201ENST00000219334 OXTRP30559 389 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 SELENOVP59797 346 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 HSF2Q03933 536 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 MXD1Q05195 221 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 PLEKHS1Q5SXH7 462 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 FITM2Q8N6M3 262 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 TELO2Q9Y4R8 837 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 SNED1Q8TER0 1413 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 A6NCN8 305 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 EBLN1P0CF75 366 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 GKP32189 559 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 GDF5P43026 501 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 CASP6P55212 293 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 RPS13P62277 151 aaKnown RBP18.4■□□□□ 0.54
SMPD3-201ENST00000219334 DSC3Q14574 896 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 SUSD1Q6UWL2 747 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 TMCO2Q7Z6W1 182 aaPredicted RBP18.4■□□□□ 0.54
SMPD3-201ENST00000219334 CPNE8Q86YQ8 564 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 ZSCAN4Q8NAM6 433 aaPredicted RBP18.4■□□□□ 0.54
SMPD3-201ENST00000219334 NLE1Q9NVX2 485 aaPredicted RBP18.4■□□□□ 0.54
SMPD3-201ENST00000219334 LCHNA4D1U4 455 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 OR1I1O60431 355 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 RNGTTO60942 597 aaKnown RBP18.4■□□□□ 0.54
SMPD3-201ENST00000219334 C8orf89P0DMQ9 161 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 CREB5Q02930 508 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 LMAN2Q12907 356 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 E2F2Q14209 437 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 KIAA1161Q6NSJ0 714 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 TBX5Q99593 518 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 SLC39A3Q9BRY0 314 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 TCRBV7S3A2A0A539 114 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 TP53I11O14683 189 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 AHCYL1O43865 530 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 PGRP06401 933 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 CDK6Q00534 326 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 PDCD4Q53EL6 469 aaKnown RBP18.4■□□□□ 0.54
SMPD3-201ENST00000219334 ULK3Q6PHR2 472 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 FEM1AQ9BSK4 669 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 IL21RQ9HBE5 538 aa18.4■□□□□ 0.54
SMPD3-201ENST00000219334 TRBC2A0A5B9 178 aa18.39■□□□□ 0.54
SMPD3-201ENST00000219334 TEX46H3BTG2 121 aa18.39■□□□□ 0.54
SMPD3-201ENST00000219334 CDH1P12830 882 aa18.39■□□□□ 0.54
SMPD3-201ENST00000219334 BMPR1AP36894 532 aa18.39■□□□□ 0.54
SMPD3-201ENST00000219334 SLC25A11Q02978 314 aaKnown RBP18.39■□□□□ 0.54
SMPD3-201ENST00000219334 ZNF267Q14586 743 aaPredicted RBP18.39■□□□□ 0.54
SMPD3-201ENST00000219334 CEACAM20Q6UY09 585 aa18.39■□□□□ 0.54
SMPD3-201ENST00000219334 ARHGAP22Q7Z5H3 698 aa18.39■□□□□ 0.54
SMPD3-201ENST00000219334 LINC00471Q8N535 108 aa18.39■□□□□ 0.54
SMPD3-201ENST00000219334 PDPRQ8NCN5 879 aa18.39■□□□□ 0.54
SMPD3-201ENST00000219334 DGCR14Q96DF8 476 aaKnown RBP18.39■□□□□ 0.54
SMPD3-201ENST00000219334 COPS4Q9BT78 406 aa18.39■□□□□ 0.54
SMPD3-201ENST00000219334 RETREG1Q9H6L5 497 aa18.39■□□□□ 0.54
SMPD3-201ENST00000219334 WDR6Q9NNW5 1121 aaKnown RBP18.39■□□□□ 0.54
SMPD3-201ENST00000219334 C14orf105Q9NVL8 296 aa18.39■□□□□ 0.54
SMPD3-201ENST00000219334 DUX1O43812 170 aa18.39■□□□□ 0.53
SMPD3-201ENST00000219334 GSRP00390 522 aa18.39■□□□□ 0.53
SMPD3-201ENST00000219334 MAMDC4Q6UXC1 1216 aa18.39■□□□□ 0.53
SMPD3-201ENST00000219334 ADAD1Q96M93 576 aaKnown RBP18.39■□□□□ 0.53
SMPD3-201ENST00000219334 FAM159BA6NKW6 160 aa18.39■□□□□ 0.53
SMPD3-201ENST00000219334 ELAVL3Q14576 367 aaKnown RBP18.39■□□□□ 0.53
SMPD3-201ENST00000219334 CGREF1Q99674 301 aa18.39■□□□□ 0.53
SMPD3-201ENST00000219334 MARCH7Q9H992 704 aa18.39■□□□□ 0.53
SMPD3-201ENST00000219334 TMLHEQ9NVH6 421 aa18.39■□□□□ 0.53
SMPD3-201ENST00000219334 FKBP7Q9Y680 259 aa18.39■□□□□ 0.53
SMPD3-201ENST00000219334 UBR1Q8IWV7 1749 aa18.39■□□□□ 0.53
SMPD3-201ENST00000219334 FOSL2P15408 326 aa18.39■□□□□ 0.53
SMPD3-201ENST00000219334 ST3GAL3Q11203 375 aa18.39■□□□□ 0.53
SMPD3-201ENST00000219334 ARFRP1Q13795 201 aa18.39■□□□□ 0.53
SMPD3-201ENST00000219334 KCNJ11Q14654 390 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms