RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 KCT2Q8NC54 265 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 ZCCHC10Q8TBK6 192 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 EGLN2Q96KS0 407 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 LRRC3BQ96PB8 259 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 MEAF6Q9HAF1 191 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 RAD18Q9NS91 495 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 SMOXQ9NWM0 555 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 TEKT2Q9UIF3 430 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 ENTPD4Q9Y227 616 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 CUL9Q8IWT3 2517 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 TNFRSF11BO00300 401 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 RTCAO00442 366 aaKnown RBP11.69□□□□□ -0.54
CHPF2-201ENST00000035307 UBFD1O14562 309 aaKnown RBP11.69□□□□□ -0.54
CHPF2-201ENST00000035307 SGTAO43765 313 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 KRT8P05787 483 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 ZNF182P17025 639 aaPredicted RBP11.69□□□□□ -0.54
CHPF2-201ENST00000035307 NOS3P29474 1203 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 PDHA2P29803 388 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 ENPP6Q6UWR7 440 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 TMEM207Q6UWW9 146 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 EIF3MQ7L2H7 374 aaKnown RBP11.69□□□□□ -0.54
CHPF2-201ENST00000035307 CYP4Z1Q86W10 505 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 LILRA2Q8N149 483 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 KRT78Q8N1N4 520 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 LEMD2Q8NC56 503 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 PHOSPHO2Q8TCD6 241 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 BTN2A2Q8WVV5 523 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 PIH1D2Q8WWB5 315 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 REPS1Q96D71 796 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 TOR3AQ9H497 397 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 WDR26Q9H7D7 661 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 MAGEE1Q9HCI5 957 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 PHPT1Q9NRX4 125 aaPredicted RBP11.69□□□□□ -0.54
CHPF2-201ENST00000035307 NDOR1Q9UHB4 597 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 ACSL6Q9UKU0 697 aa11.69□□□□□ -0.54
CHPF2-201ENST00000035307 RP1P56715 2156 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 EDDM13A0A1B0GTR0 161 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 AQP12BA6NM10 295 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 WASH4PA8MWX3 477 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 H3BNC9 293 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 K7ESM1 405 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 PDYNP01213 254 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 FABP3P05413 133 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 LPAL2Q16609 132 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 C9orf64Q5T6V5 341 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 AGTRAPQ6RW13 159 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 ERN2Q76MJ5 926 aaKnown RBP11.68□□□□□ -0.54
CHPF2-201ENST00000035307 ZSWIM9Q86XI8 627 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 ARMC8Q8IUR7 673 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 AQP12AQ8IXF9 295 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 PRSS58Q8IYP2 241 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 SLC34A3Q8N130 599 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 TTC29Q8NA56 475 aaPredicted RBP11.68□□□□□ -0.54
CHPF2-201ENST00000035307 TSACCQ96A04 125 aaPredicted RBP11.68□□□□□ -0.54
CHPF2-201ENST00000035307 VPS29Q9UBQ0 182 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 ATP6V1HQ9UI12 483 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 PCTPQ9UKL6 214 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 OTOL1A6NHN0 477 aaPredicted RBP11.68□□□□□ -0.54
CHPF2-201ENST00000035307 TFECO14948 347 aaPredicted RBP11.68□□□□□ -0.54
CHPF2-201ENST00000035307 FESP07332 822 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 DDX6P26196 483 aaKnown RBP eCLIP11.68□□□□□ -0.54
CHPF2-201ENST00000035307 MAPK12P53778 367 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 MED27Q6P2C8 311 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 LILRA6Q6PI73 481 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 AMZ2Q86W34 360 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 TMC8Q8IU68 726 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 ZFP28Q8NHY6 868 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 CD200R1Q8TD46 325 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 RAB8BQ92930 207 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 KLHL1Q9NR64 748 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 ZDHHC7Q9NXF8 308 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 SAMD4AQ9UPU9 718 aaKnown RBP11.68□□□□□ -0.54
CHPF2-201ENST00000035307 TCRBV21S2A2A0A5A6 115 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 ANKRD33BA6NCL7 494 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 BCKDHAP12694 445 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 TYRP1P17643 537 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 RPS13P62277 151 aaKnown RBP11.68□□□□□ -0.54
CHPF2-201ENST00000035307 EPS8Q12929 822 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 ELAVL3Q14576 367 aaKnown RBP11.68□□□□□ -0.54
CHPF2-201ENST00000035307 TAF8Q7Z7C8 310 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 VTCN1Q7Z7D3 282 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 POC5Q8NA72 575 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 MACROD1Q9BQ69 325 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 CD244Q9BZW8 370 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 EHD3Q9NZN3 535 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 SEC14L3Q9UDX4 400 aa11.68□□□□□ -0.54
CHPF2-201ENST00000035307 PAIP2BQ9ULR5 123 aaKnown RBP11.68□□□□□ -0.54
CHPF2-201ENST00000035307 ZNF646O15015 1829 aaPredicted RBP11.68□□□□□ -0.54
CHPF2-201ENST00000035307 OR52A4PA6NMU1 304 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 CREG1O75629 220 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 PEX11BO96011 259 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 IGLV3-27P01718 113 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 RPS26P62854 115 aaKnown RBP11.67□□□□□ -0.54
CHPF2-201ENST00000035307 HSF5Q4G112 596 aaPredicted RBP11.67□□□□□ -0.54
CHPF2-201ENST00000035307 PTCHD4Q6ZW05 846 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.67□□□□□ -0.54
CHPF2-201ENST00000035307 OOSP2Q86WS3 158 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 GALNT13Q8IUC8 556 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 CLECL1Q8IZS7 167 aa11.67□□□□□ -0.54
CHPF2-201ENST00000035307 CAMKK1Q8N5S9 505 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms