RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 GTPBP3Q969Y2 492 aaKnown RBP8.97□□□□□ -0.97
GGA3-223ENST00000621870 ARHGAP9Q9BRR9 750 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 TBX21Q9UL17 535 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 CCL26Q9Y258 94 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 C15orf41Q9Y2V0 281 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 ZNF318Q5VUA4 2279 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 MYOCOSA0A1B0GUC4 107 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 FAM234BA2RU67 622 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 TRIM43BA6NCK2 446 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 MANBAO00462 879 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 NPC1O15118 1278 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 SERPINB1P30740 379 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 CASRP41180 1078 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 ATP12AP54707 1039 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 HHEXQ03014 270 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 PPP1R8Q12972 351 aaKnown RBP8.97□□□□□ -0.97
GGA3-223ENST00000621870 SPANXN4Q5MJ08 99 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 EGFLAMQ63HQ2 1017 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 SMARCD3Q6STE5 483 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 SLC29A4Q7RTT9 530 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 IQCHQ86VS3 1027 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 RANBP3LQ86VV4 465 aaPredicted RBP8.97□□□□□ -0.97
GGA3-223ENST00000621870 SFRP1Q8N474 314 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 FAM81AQ8TBF8 368 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 PEX13Q92968 403 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 MOCOSQ96EN8 888 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 DTNBP1Q96EV8 351 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 SLC35A5Q9BS91 424 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 CD244Q9BZW8 370 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 STRADBQ9C0K7 418 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 IL26Q9NPH9 171 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 PRDM8Q9NQV8 689 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 PHF11Q9UIL8 331 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 MCM8Q9UJA3 840 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 GSTK1Q9Y2Q3 226 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.96□□□□□ -0.97
GGA3-223ENST00000621870 DUX1O43812 170 aa8.96□□□□□ -0.97
GGA3-223ENST00000621870 NME6O75414 186 aaPredicted RBP8.96□□□□□ -0.97
GGA3-223ENST00000621870 ZBTB11O95625 1053 aaPredicted RBP8.96□□□□□ -0.97
GGA3-223ENST00000621870 EBLN1P0CF75 366 aa8.96□□□□□ -0.97
GGA3-223ENST00000621870 PIM1P11309 404 aaPredicted RBP8.96□□□□□ -0.97
GGA3-223ENST00000621870 SLC26A3P40879 764 aa8.96□□□□□ -0.97
GGA3-223ENST00000621870 SLC7A9P82251 487 aa8.96□□□□□ -0.97
GGA3-223ENST00000621870 MED22Q15528 200 aa8.96□□□□□ -0.97
GGA3-223ENST00000621870 CYP27C1Q4G0S4 372 aa8.96□□□□□ -0.97
GGA3-223ENST00000621870 MPP7Q5T2T1 576 aa8.96□□□□□ -0.97
GGA3-223ENST00000621870 KIAA0319Q5VV43 1072 aa8.96□□□□□ -0.97
GGA3-223ENST00000621870 TMEM214Q6NUQ4 689 aaKnown RBP8.96□□□□□ -0.97
GGA3-223ENST00000621870 TMEFF1Q8IYR6 380 aa8.96□□□□□ -0.97
GGA3-223ENST00000621870 CACTIN-AS1Q8N1I8 211 aa8.96□□□□□ -0.97
GGA3-223ENST00000621870 THAP3Q8WTV1 239 aaPredicted RBP8.96□□□□□ -0.97
GGA3-223ENST00000621870 SLC25A36Q96CQ1 311 aa8.96□□□□□ -0.97
GGA3-223ENST00000621870 MRPL38Q96DV4 380 aaKnown RBP8.96□□□□□ -0.97
GGA3-223ENST00000621870 NSUN5Q96P11 429 aaKnown RBP8.96□□□□□ -0.97
GGA3-223ENST00000621870 TAS2R1Q9NYW7 299 aa8.96□□□□□ -0.97
GGA3-223ENST00000621870 CXCR6O00574 342 aa8.96□□□□□ -0.97
GGA3-223ENST00000621870 KIAA0355O15063 1070 aa8.96□□□□□ -0.97
GGA3-223ENST00000621870 G6PDP11413 515 aa8.96□□□□□ -0.97
GGA3-223ENST00000621870 PFKLP17858 780 aa8.96□□□□□ -0.97
GGA3-223ENST00000621870 FAM189BP81408 668 aa8.96□□□□□ -0.97
GGA3-223ENST00000621870 AMIGO1Q86WK6 493 aa8.96□□□□□ -0.97
GGA3-223ENST00000621870 ZDHHC21Q8IVQ6 265 aa8.96□□□□□ -0.97
GGA3-223ENST00000621870 IZUMO1Q8IYV9 350 aa8.96□□□□□ -0.97
GGA3-223ENST00000621870 MOSPD2Q8NHP6 518 aa8.96□□□□□ -0.97
GGA3-223ENST00000621870 PIH1D2Q8WWB5 315 aa8.96□□□□□ -0.97
GGA3-223ENST00000621870 RASSF5Q8WWW0 418 aa8.96□□□□□ -0.97
GGA3-223ENST00000621870 TP53INP1Q96A56 240 aa8.96□□□□□ -0.97
GGA3-223ENST00000621870 TRMT2BQ96GJ1 504 aaKnown RBP8.96□□□□□ -0.97
GGA3-223ENST00000621870 SMIM14Q96QK8 99 aa8.96□□□□□ -0.97
GGA3-223ENST00000621870 PBX4Q9BYU1 374 aa8.96□□□□□ -0.97
GGA3-223ENST00000621870 NUAK2Q9H093 628 aa8.96□□□□□ -0.97
GGA3-223ENST00000621870 IL17CQ9P0M4 197 aa8.96□□□□□ -0.97
GGA3-223ENST00000621870 SPATA7Q9P0W8 599 aa8.96□□□□□ -0.97
GGA3-223ENST00000621870 FADS3Q9Y5Q0 445 aa8.96□□□□□ -0.97
GGA3-223ENST00000621870 OR52A4PA6NMU1 304 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 FADS2P1A8MWK0 482 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 RTCAO00442 366 aaKnown RBP8.96□□□□□ -0.98
GGA3-223ENST00000621870 OR2B3O76000 313 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 SCELO95171 688 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 DLGAP3O95886 979 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 ALDOAP04075 364 aaKnown RBP8.96□□□□□ -0.98
GGA3-223ENST00000621870 PCSK2P16519 638 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 GRK6P43250 576 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 LEPRP48357 1165 aaKnown RBP8.96□□□□□ -0.98
GGA3-223ENST00000621870 CDKN1CP49918 316 aaPredicted RBP8.96□□□□□ -0.98
GGA3-223ENST00000621870 PLGLB1Q02325 96 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 TIMM50Q3ZCQ8 353 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 LPCAT4Q643R3 524 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 ZBTB46Q86UZ6 589 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 NPAS3Q8IXF0 933 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 SLC34A3Q8N130 599 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 DEFB123Q8N688 67 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 FAM47BQ8NA70 645 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 UXS1Q8NBZ7 420 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 RHBDD1Q8TEB9 315 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 DOK4Q8TEW6 326 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 MGME1Q9BQP7 344 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 SLC29A3Q9BZD2 475 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 OSBPL7Q9BZF2 842 aa8.96□□□□□ -0.98
GGA3-223ENST00000621870 HDHD2Q9H0R4 259 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms