RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 CEP104O60308 925 aa19.74■□□□□ 0.75
TRAPPC3-208ENST00000616074 SLC16A8O95907 504 aa19.74■□□□□ 0.75
TRAPPC3-208ENST00000616074 CELA2AP08217 269 aa19.74■□□□□ 0.75
TRAPPC3-208ENST00000616074 PAMP19021 973 aa19.74■□□□□ 0.75
TRAPPC3-208ENST00000616074 SLC26A3P40879 764 aa19.74■□□□□ 0.75
TRAPPC3-208ENST00000616074 VPS41P49754 854 aa19.74■□□□□ 0.75
TRAPPC3-208ENST00000616074 ANKRD22Q5VYY1 191 aa19.74■□□□□ 0.75
TRAPPC3-208ENST00000616074 FAAH2Q6GMR7 532 aa19.74■□□□□ 0.75
TRAPPC3-208ENST00000616074 NEPROQ6NW34 567 aa19.74■□□□□ 0.75
TRAPPC3-208ENST00000616074 CASC4Q6P4E1 433 aa19.74■□□□□ 0.75
TRAPPC3-208ENST00000616074 ARHGEF39Q8N4T4 335 aa19.74■□□□□ 0.75
TRAPPC3-208ENST00000616074 SIRT6Q8N6T7 355 aa19.74■□□□□ 0.75
TRAPPC3-208ENST00000616074 PRELID2Q8N945 189 aa19.74■□□□□ 0.75
TRAPPC3-208ENST00000616074 ZNF480Q8WV37 535 aa19.74■□□□□ 0.75
TRAPPC3-208ENST00000616074 ABCF3Q9NUQ8 709 aa19.74■□□□□ 0.75
TRAPPC3-208ENST00000616074 OLAHQ9NV23 265 aa19.74■□□□□ 0.75
TRAPPC3-208ENST00000616074 INTS10Q9NVR2 710 aaKnown RBP19.74■□□□□ 0.75
TRAPPC3-208ENST00000616074 PCYOX1Q9UHG3 505 aa19.74■□□□□ 0.75
TRAPPC3-208ENST00000616074 CREBBPQ92793 2442 aa19.74■□□□□ 0.75
TRAPPC3-208ENST00000616074 CSMD1Q96PZ7 3565 aa19.74■□□□□ 0.75
TRAPPC3-208ENST00000616074 GOLGA6L6A8MZA4 724 aa19.73■□□□□ 0.75
TRAPPC3-208ENST00000616074 E7ENX8 843 aa19.73■□□□□ 0.75
TRAPPC3-208ENST00000616074 P2RX6O15547 441 aa19.73■□□□□ 0.75
TRAPPC3-208ENST00000616074 FOXS1O43638 330 aa19.73■□□□□ 0.75
TRAPPC3-208ENST00000616074 CCNDBP1O95273 360 aa19.73■□□□□ 0.75
TRAPPC3-208ENST00000616074 SERPINA7P05543 415 aa19.73■□□□□ 0.75
TRAPPC3-208ENST00000616074 HEXBP07686 556 aa19.73■□□□□ 0.75
TRAPPC3-208ENST00000616074 EZRP15311 586 aaKnown RBP19.73■□□□□ 0.75
TRAPPC3-208ENST00000616074 CXCR2P25025 360 aa19.73■□□□□ 0.75
TRAPPC3-208ENST00000616074 CXCR5P32302 372 aa19.73■□□□□ 0.75
TRAPPC3-208ENST00000616074 HSD17B2P37059 387 aa19.73■□□□□ 0.75
TRAPPC3-208ENST00000616074 MAGEA6P43360 314 aa19.73■□□□□ 0.75
TRAPPC3-208ENST00000616074 TAP2Q03519 686 aa19.73■□□□□ 0.75
TRAPPC3-208ENST00000616074 CUL1Q13616 776 aa19.73■□□□□ 0.75
TRAPPC3-208ENST00000616074 SYT16Q17RD7 645 aa19.73■□□□□ 0.75
TRAPPC3-208ENST00000616074 GARNL3Q5VVW2 1013 aa19.73■□□□□ 0.75
TRAPPC3-208ENST00000616074 ZNF470Q6ECI4 717 aa19.73■□□□□ 0.75
TRAPPC3-208ENST00000616074 NEK10Q6ZWH5 1172 aa19.73■□□□□ 0.75
TRAPPC3-208ENST00000616074 CAND1Q86VP6 1230 aaKnown RBP19.73■□□□□ 0.75
TRAPPC3-208ENST00000616074 AMER2Q8N7J2 671 aa19.73■□□□□ 0.75
TRAPPC3-208ENST00000616074 BCORP1Q8N888 145 aa19.73■□□□□ 0.75
TRAPPC3-208ENST00000616074 RERGQ96A58 199 aaPredicted RBP19.73■□□□□ 0.75
TRAPPC3-208ENST00000616074 ZNF669Q96BR6 464 aaPredicted RBP19.73■□□□□ 0.75
TRAPPC3-208ENST00000616074 MAGEB10Q96LZ2 347 aaPredicted RBP19.73■□□□□ 0.75
TRAPPC3-208ENST00000616074 MKKSQ9NPJ1 570 aaPredicted RBP19.73■□□□□ 0.75
TRAPPC3-208ENST00000616074 VPS9D1Q9Y2B5 631 aa19.73■□□□□ 0.75
TRAPPC3-208ENST00000616074 MED16Q9Y2X0 877 aa19.73■□□□□ 0.75
TRAPPC3-208ENST00000616074 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 A0A0A6YYC8 382 aaPredicted RBP19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 DYTNA2CJ06 578 aa19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 ZNF839A8K0R7 811 aa19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 I3L1I5 382 aaPredicted RBP19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 SMAPO00193 183 aa19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 HAT1O14929 419 aa19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 SYF2O95926 243 aaKnown RBP19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 ANXA5P08758 320 aa19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 FDXRP22570 491 aa19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 TNFSF10P50591 281 aa19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 EFNA3P52797 238 aa19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 PER3P56645 1201 aa19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 SNRPNP63162 240 aaKnown RBP19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 SARNPP82979 210 aaKnown RBP19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 GPS1Q13098 491 aa19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 DHX34Q14147 1143 aaKnown RBP19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 TTLL9Q3SXZ7 439 aa19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 ZNF324BQ6AW86 544 aaPredicted RBP19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 ADCK2Q7Z695 626 aa19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 PLD3Q8IV08 490 aa19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 DENND6AQ8IWF6 608 aa19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 ZC3H7AQ8IWR0 971 aaKnown RBP19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 LRRC56Q8IYG6 542 aaPredicted RBP19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 FBXO15Q8NCQ5 510 aaPredicted RBP19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 TAAR6Q96RI8 345 aa19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 TGIF2Q9GZN2 237 aa19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 DRC3Q9H069 523 aa19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 FBXO6Q9NRD1 293 aaPredicted RBP19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 HOMER3Q9NSC5 361 aa19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 RIC8BQ9NVN3 520 aa19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 UTP6Q9NYH9 597 aaKnown RBP19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 SAMD15Q9P1V8 674 aa19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 MRPS2Q9Y399 296 aaKnown RBP19.72■□□□□ 0.75
TRAPPC3-208ENST00000616074 FAM237BA0A1B0GVD1 139 aa19.71■□□□□ 0.75
TRAPPC3-208ENST00000616074 CTAGE9A4FU28 777 aa19.71■□□□□ 0.75
TRAPPC3-208ENST00000616074 BMP10O95393 424 aa19.71■□□□□ 0.75
TRAPPC3-208ENST00000616074 F10P00742 488 aa19.71■□□□□ 0.75
TRAPPC3-208ENST00000616074 TDGF1P3P51864 188 aa19.71■□□□□ 0.75
TRAPPC3-208ENST00000616074 ABATP80404 500 aa19.71■□□□□ 0.75
TRAPPC3-208ENST00000616074 MAT1AQ00266 395 aaKnown RBP19.71■□□□□ 0.75
TRAPPC3-208ENST00000616074 CTBP1Q13363 440 aa19.71■□□□□ 0.75
TRAPPC3-208ENST00000616074 PCOLCEQ15113 449 aa19.71■□□□□ 0.75
TRAPPC3-208ENST00000616074 ZRSR2Q15696 482 aaKnown RBP19.71■□□□□ 0.75
TRAPPC3-208ENST00000616074 ARMC3Q5W041 872 aa19.71■□□□□ 0.75
TRAPPC3-208ENST00000616074 ZNF549Q6P9A3 640 aa19.71■□□□□ 0.75
TRAPPC3-208ENST00000616074 ZNF662Q6ZS27 426 aa19.71■□□□□ 0.75
TRAPPC3-208ENST00000616074 HAS2Q92819 552 aa19.71■□□□□ 0.75
TRAPPC3-208ENST00000616074 LOC102723996A0A087X1L8 192 aa19.7■□□□□ 0.74
TRAPPC3-208ENST00000616074 TRAV17A0A0B4J275 112 aa19.7■□□□□ 0.74
TRAPPC3-208ENST00000616074 TXNDC9O14530 226 aa19.7■□□□□ 0.74
TRAPPC3-208ENST00000616074 ZG16O60844 167 aa19.7■□□□□ 0.74
TRAPPC3-208ENST00000616074 JRKO75564 520 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms