RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 AKAP1Q92667 903 aaKnown RBP eCLIP16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 MOAP1Q96BY2 351 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 SMOC2Q9H3U7 446 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 HPF1Q9NWY4 346 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 CMAHPQ9Y471 501 aa16.97■□□□□ 0.31
HMGXB3-206ENST00000613459 WASHC1A8K0Z3 465 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 WASH3PC4AMC7 463 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 FSHRP23945 695 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 IRF9Q00978 393 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 LRRC32Q14392 662 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 WASH2PQ6VEQ5 465 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 CHRDL2Q6WN34 429 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 TMCO2Q7Z6W1 182 aaPredicted RBP16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 C1orf216Q8TAB5 229 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 TMBIM1Q969X1 311 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 PTPN18Q99952 460 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 BCO2Q9BYV7 579 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 PCDHAC1Q9H158 963 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 ABCB8Q9NUT2 735 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 RIMKLBQ9ULI2 386 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 NOTOA8MTQ0 251 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 FAM189A1O60320 539 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 DNAJB5O75953 348 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 TCEAL1Q15170 157 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 SLC8B1Q6J4K2 584 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 ZNF627Q7L945 461 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 C7orf57Q8NEG2 295 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 PYURFQ96I23 114 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 SLC45A1Q9Y2W3 748 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 CXCR1P25024 350 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 BNIP3Q12983 259 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 EIF2S3LQ2VIR3 472 aaKnown RBP16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 ZC3HC1Q86WB0 502 aaKnown RBP16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 NXPE1Q8N323 547 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 NDC1Q9BTX1 674 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 TM9SF3Q9HD45 589 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 B3GAT2Q9NPZ5 323 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 OAZ3Q9UMX2 235 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 LOC100130705A0A1B0GUX0 176 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 A0A1W2PP18 115 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 UNCXA6NJT0 531 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 GADD45AP24522 165 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 GRIA1P42261 906 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 MAGEA12P43365 314 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 SIRPB2Q5JXA9 342 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 LRRTM4Q86VH4 590 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 RELL1Q8IUW5 271 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 EMID1Q96A84 441 aaPredicted RBP16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 PNPLA2Q96AD5 504 aa16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 ZNF317Q96PQ6 595 aaPredicted RBP16.96■□□□□ 0.31
HMGXB3-206ENST00000613459 CASP9P55211 416 aa16.96■□□□□ 0.3
HMGXB3-206ENST00000613459 MC1RQ01726 317 aa16.96■□□□□ 0.3
HMGXB3-206ENST00000613459 MARCH9Q86YJ5 346 aa16.96■□□□□ 0.3
HMGXB3-206ENST00000613459 KAT2AQ92830 837 aa16.96■□□□□ 0.3
HMGXB3-206ENST00000613459 GAL3ST3Q96A11 431 aa16.96■□□□□ 0.3
HMGXB3-206ENST00000613459 KCNC2Q96PR1 638 aa16.96■□□□□ 0.3
HMGXB3-206ENST00000613459 PCDHB16Q9NRJ7 776 aa16.96■□□□□ 0.3
HMGXB3-206ENST00000613459 SCML2Q9UQR0 700 aa16.96■□□□□ 0.3
HMGXB3-206ENST00000613459 ZNF451Q9Y4E5 1061 aa16.96■□□□□ 0.3
HMGXB3-206ENST00000613459 ZNF726A6NNF4 738 aa16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 L7N2F9 121 aa16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 MANBAO00462 879 aa16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 GRK5P34947 590 aa16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 VAMP2P63027 116 aa16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 RHDQ02161 417 aa16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 EMX2Q04743 252 aa16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 ZNF829Q3KNS6 432 aaPredicted RBP16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 COQ8BQ96D53 544 aa16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 MTERF1Q99551 399 aaKnown RBP16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 SDHAF3Q9NRP4 125 aa16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 OAS1P00973 400 aaKnown RBP16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 GLDCP23378 1020 aa16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 TIGD5Q53EQ6 642 aa16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 IFNLR1Q8IU57 520 aaPredicted RBP16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 HDDC3Q8N4P3 179 aa16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 TBL1XR1Q9BZK7 514 aa16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 FANCFQ9NPI8 374 aa16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 TMLHEQ9NVH6 421 aa16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 UCKL1Q9NWZ5 548 aa16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 GDAP2Q9NXN4 497 aa16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 TRBC2A0A5B9 178 aa16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 ZSCAN5BA6NJL1 495 aa16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 PDLIM1O00151 329 aa16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 TPST2O60704 377 aa16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 ATP1B2P14415 290 aaPredicted RBP16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 MOB2Q70IA6 237 aa16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 FBXO15Q8NCQ5 510 aaPredicted RBP16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 ATP6V1C2Q8NEY4 427 aa16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 OR6K6Q8NGW6 343 aa16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 BTBD1Q9H0C5 482 aa16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 TMEM59LQ9UK28 342 aa16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 SHPRHQ149N8 1683 aa16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 H3BSA7 217 aa16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 PVALBP20472 110 aaPredicted RBP16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 GANABQ14697 944 aaKnown RBP16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 OR13C4Q8NGS5 318 aa16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 THAP6Q8TBB0 222 aa16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 ZNF431Q8TF32 576 aaPredicted RBP16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 TRIB3Q96RU7 358 aa16.95■□□□□ 0.3
HMGXB3-206ENST00000613459 ZBTB26Q9HCK0 441 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms