RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 SEMA4BQ9NPR2 832 aaPredicted RBP11.32□□□□□ -0.6
VRK3-223ENST00000601341 WWOXQ9NZC7 414 aa11.32□□□□□ -0.6
VRK3-223ENST00000601341 AP3M1Q9Y2T2 418 aa11.32□□□□□ -0.6
VRK3-223ENST00000601341 DGKBQ9Y6T7 804 aa11.32□□□□□ -0.6
VRK3-223ENST00000601341 NCOR1O75376 2440 aa11.32□□□□□ -0.6
VRK3-223ENST00000601341 LRRC14BA6NHZ5 514 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 PPP6CO00743 305 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 TAPBPO15533 448 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 C1orf105O95561 183 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 RPN2P04844 631 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 EMX2Q04743 252 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 ALG11Q2TAA5 492 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 KCTD21Q4G0X4 260 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 FBXO48Q5FWF7 155 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 MTX3Q5HYI7 312 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 TMTC4Q5T4D3 741 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 C6orf52Q5T4I8 152 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 TSSK4Q6SA08 328 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 SATL1Q86VE3 508 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 IQCHQ86VS3 1027 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 HID1Q8IV36 788 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 C1orf210Q8IVY1 113 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 TBC1D21Q8IYX1 336 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 SLC22A18ASQ8N1D0 253 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 UBTD2Q8WUN7 234 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 ATL1Q8WXF7 558 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 TFGQ92734 400 aaPredicted RBP11.31□□□□□ -0.6
VRK3-223ENST00000601341 TFAP2CQ92754 450 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 TMEM125Q96AQ2 219 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 PPWD1Q96BP3 646 aaKnown RBP11.31□□□□□ -0.6
VRK3-223ENST00000601341 DTNBP1Q96EV8 351 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 HSPA12BQ96MM6 686 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 SLC6A18Q96N87 628 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 CD244Q9BZW8 370 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 ZDHHC5Q9C0B5 715 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 DUSP15Q9H1R2 295 aaPredicted RBP11.31□□□□□ -0.6
VRK3-223ENST00000601341 ALG2Q9H553 416 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 GPR27Q9NS67 375 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 TRNAU1APQ9NX07 287 aaKnown RBP11.31□□□□□ -0.6
VRK3-223ENST00000601341 CMTM6Q9NX76 183 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 ZNF225Q9UK10 706 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 KCNK6Q9Y257 313 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 ASF1AQ9Y294 204 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 TECTAO75443 2155 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 CCDC154A6NI56 674 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 PRR19A6NJB7 356 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 TRIM64CA6NLI5 447 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 STK16O75716 305 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 RASGRP1O95267 797 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 OTCP00480 354 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 TNFP01375 233 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 ZNF23P17027 643 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 ATP6V1B2P21281 511 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 BCKDHBP21953 392 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 RPL10P27635 214 aaKnown RBP11.31□□□□□ -0.6
VRK3-223ENST00000601341 CD38P28907 300 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 GGT5P36269 586 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 ZFP36L2P47974 494 aaKnown RBP11.31□□□□□ -0.6
VRK3-223ENST00000601341 HSPA7P48741 367 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 FNTBP49356 437 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 CLCNKAP51800 687 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 POLR2JP52435 117 aaKnown RBP11.31□□□□□ -0.6
VRK3-223ENST00000601341 NME5P56597 212 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 MAD2L1Q13257 205 aaPredicted RBP11.31□□□□□ -0.6
VRK3-223ENST00000601341 NFYCQ13952 458 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 C11orf91Q3C1V1 193 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 ATP6AP1LQ52LC2 224 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.31□□□□□ -0.6
VRK3-223ENST00000601341 WDR45BQ5MNZ6 344 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 C6orf136Q5SQH8 315 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 HMBOX1Q6NT76 420 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 LAYNQ6UX15 382 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 MBOAT1Q6ZNC8 495 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 WDR5BQ86VZ2 330 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 ZFAND4Q86XD8 727 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 TMEFF1Q8IYR6 380 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 TNIP2Q8NFZ5 429 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 DNASE2BQ8WZ79 361 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 ESAMQ96AP7 390 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 FBXL8Q96CD0 374 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 KCNA7Q96RP8 456 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 MIR1-1HGQ9H1L0 117 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 NOL11Q9H8H0 719 aaKnown RBP11.31□□□□□ -0.6
VRK3-223ENST00000601341 OPTCQ9UBM4 332 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 MYRFQ9Y2G1 1151 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 PLEKHM1Q9Y4G2 1056 aa11.31□□□□□ -0.6
VRK3-223ENST00000601341 BDP1A6H8Y1 2624 aa11.3□□□□□ -0.6
VRK3-223ENST00000601341 TRIM64A6NGJ6 449 aa11.3□□□□□ -0.6
VRK3-223ENST00000601341 PDZK1P1A8MUH7 402 aa11.3□□□□□ -0.6
VRK3-223ENST00000601341 H3BNH8 94 aa11.3□□□□□ -0.6
VRK3-223ENST00000601341 K7EPI3 171 aa11.3□□□□□ -0.6
VRK3-223ENST00000601341 ARPC2O15144 300 aa11.3□□□□□ -0.6
VRK3-223ENST00000601341 AKAP10O43572 662 aa11.3□□□□□ -0.6
VRK3-223ENST00000601341 WDR47O94967 919 aa11.3□□□□□ -0.6
VRK3-223ENST00000601341 TDGF1P13385 188 aa11.3□□□□□ -0.6
VRK3-223ENST00000601341 MAOBP27338 520 aa11.3□□□□□ -0.6
VRK3-223ENST00000601341 BDKRB1P46663 353 aa11.3□□□□□ -0.6
VRK3-223ENST00000601341 PIK3CGP48736 1102 aa11.3□□□□□ -0.6
VRK3-223ENST00000601341 CCT8P50990 548 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms