RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 TMIGD1Q6UXZ0 262 aa21.73■■□□□ 1.07
IRF3-228ENST00000601291 CLNKQ7Z7G1 428 aa21.73■■□□□ 1.07
IRF3-228ENST00000601291 ZNF761Q86XN6 746 aaPredicted RBP21.73■■□□□ 1.07
IRF3-228ENST00000601291 OR2T11Q8NH01 316 aa21.73■■□□□ 1.07
IRF3-228ENST00000601291 PPP3R2Q96LZ3 170 aa21.73■■□□□ 1.07
IRF3-228ENST00000601291 PRAP1Q96NZ9 151 aa21.73■■□□□ 1.07
IRF3-228ENST00000601291 HRASLS2Q9NWW9 162 aa21.73■■□□□ 1.07
IRF3-228ENST00000601291 ACTR10Q9NZ32 417 aa21.73■■□□□ 1.07
IRF3-228ENST00000601291 TMEM131Q92545 1883 aa21.73■■□□□ 1.07
IRF3-228ENST00000601291 ARHGEF17Q96PE2 2063 aaPredicted RBP21.72■■□□□ 1.07
IRF3-228ENST00000601291 OR5K3A6NET4 321 aa21.72■■□□□ 1.07
IRF3-228ENST00000601291 RHPN2P1A8MT19 583 aa21.72■■□□□ 1.07
IRF3-228ENST00000601291 PEX11AO75192 247 aa21.72■■□□□ 1.07
IRF3-228ENST00000601291 FKBP9O95302 570 aa21.72■■□□□ 1.07
IRF3-228ENST00000601291 HSD3B1P14060 373 aa21.72■■□□□ 1.07
IRF3-228ENST00000601291 UGT2B7P16662 529 aa21.72■■□□□ 1.07
IRF3-228ENST00000601291 HSD3B2P26439 372 aa21.72■■□□□ 1.07
IRF3-228ENST00000601291 GRK3P35626 688 aa21.72■■□□□ 1.07
IRF3-228ENST00000601291 NEK2P51955 445 aa21.72■■□□□ 1.07
IRF3-228ENST00000601291 YBX1P67809 324 aaKnown RBP21.72■■□□□ 1.07
IRF3-228ENST00000601291 REEP5Q00765 189 aa21.72■■□□□ 1.07
IRF3-228ENST00000601291 MEF2AQ02078 507 aaPredicted RBP21.72■■□□□ 1.07
IRF3-228ENST00000601291 Q6ZSR9 355 aa21.72■■□□□ 1.07
IRF3-228ENST00000601291 OR4K1Q8NGD4 311 aa21.72■■□□□ 1.07
IRF3-228ENST00000601291 SAP25Q8TEE9 199 aa21.72■■□□□ 1.07
IRF3-228ENST00000601291 TBC1D10AQ9BXI6 508 aa21.72■■□□□ 1.07
IRF3-228ENST00000601291 ARRDC1-AS1Q9H2J1 176 aa21.72■■□□□ 1.07
IRF3-228ENST00000601291 SAR1AQ9NR31 198 aa21.72■■□□□ 1.07
IRF3-228ENST00000601291 TMEM184CQ9NVA4 438 aa21.72■■□□□ 1.07
IRF3-228ENST00000601291 PRR35P0CG20 571 aa21.71■■□□□ 1.07
IRF3-228ENST00000601291 GIMD1P0DJR0 217 aa21.71■■□□□ 1.07
IRF3-228ENST00000601291 DDX39BQ13838 428 aaKnown RBP21.71■■□□□ 1.07
IRF3-228ENST00000601291 NAA25Q14CX7 972 aa21.71■■□□□ 1.07
IRF3-228ENST00000601291 GALNTL6Q49A17 601 aa21.71■■□□□ 1.07
IRF3-228ENST00000601291 TMEM198Q66K66 360 aa21.71■■□□□ 1.07
IRF3-228ENST00000601291 OGFOD2Q6N063 350 aa21.71■■□□□ 1.07
IRF3-228ENST00000601291 ZCCHC8Q6NZY4 707 aaKnown RBP21.71■■□□□ 1.07
IRF3-228ENST00000601291 CCDC121Q6ZUS5 278 aa21.71■■□□□ 1.07
IRF3-228ENST00000601291 KANSL1Q7Z3B3 1105 aa21.71■■□□□ 1.07
IRF3-228ENST00000601291 SPATA19Q7Z5L4 167 aa21.71■■□□□ 1.07
IRF3-228ENST00000601291 GATAD2AQ86YP4 633 aa21.71■■□□□ 1.07
IRF3-228ENST00000601291 TBC1D19Q8N5T2 526 aa21.71■■□□□ 1.07
IRF3-228ENST00000601291 CATSPER2Q96P56 530 aa21.71■■□□□ 1.07
IRF3-228ENST00000601291 OR2A14Q96R47 310 aa21.71■■□□□ 1.07
IRF3-228ENST00000601291 COL25A1Q9BXS0 654 aaPredicted RBP21.71■■□□□ 1.07
IRF3-228ENST00000601291 ACPTQ9BZG2 426 aa21.71■■□□□ 1.07
IRF3-228ENST00000601291 SPNS1Q9H2V7 528 aa21.71■■□□□ 1.07
IRF3-228ENST00000601291 NT5DC2Q9H857 520 aa21.71■■□□□ 1.07
IRF3-228ENST00000601291 BRF2Q9HAW0 419 aa21.71■■□□□ 1.07
IRF3-228ENST00000601291 IL21RQ9HBE5 538 aa21.71■■□□□ 1.07
IRF3-228ENST00000601291 SLC6A20Q9NP91 592 aa21.71■■□□□ 1.07
IRF3-228ENST00000601291 ADGRE2Q9UHX3 823 aa21.71■■□□□ 1.07
IRF3-228ENST00000601291 GMEB2Q9UKD1 530 aa21.71■■□□□ 1.07
IRF3-228ENST00000601291 SNX7Q9UNH6 387 aa21.71■■□□□ 1.07
IRF3-228ENST00000601291 TSC22D4Q9Y3Q8 395 aa21.71■■□□□ 1.07
IRF3-228ENST00000601291 LSM1O15116 133 aaKnown RBP21.7■■□□□ 1.06
IRF3-228ENST00000601291 RSL1D1O76021 490 aaKnown RBP21.7■■□□□ 1.06
IRF3-228ENST00000601291 UBXN7O94888 489 aa21.7■■□□□ 1.06
IRF3-228ENST00000601291 AMD1P17707 334 aa21.7■■□□□ 1.06
IRF3-228ENST00000601291 SERPINB1P30740 379 aa21.7■■□□□ 1.06
IRF3-228ENST00000601291 CSNK1G2P78368 415 aa21.7■■□□□ 1.06
IRF3-228ENST00000601291 RBBP5Q15291 538 aaKnown RBP21.7■■□□□ 1.06
IRF3-228ENST00000601291 CHSY3Q70JA7 882 aa21.7■■□□□ 1.06
IRF3-228ENST00000601291 HUS1BQ8NHY5 278 aa21.7■■□□□ 1.06
IRF3-228ENST00000601291 MTERF1Q99551 399 aaKnown RBP21.7■■□□□ 1.06
IRF3-228ENST00000601291 DPH7Q9BTV6 452 aa21.7■■□□□ 1.06
IRF3-228ENST00000601291 ARMCX1Q9P291 453 aa21.7■■□□□ 1.06
IRF3-228ENST00000601291 GIMAP2Q9UG22 337 aa21.7■■□□□ 1.06
IRF3-228ENST00000601291 G3BP2Q9UN86 482 aaKnown RBP21.7■■□□□ 1.06
IRF3-228ENST00000601291 CCL27Q9Y4X3 112 aa21.7■■□□□ 1.06
IRF3-228ENST00000601291 IGKV1-8A0A0C4DH67 115 aa21.7■■□□□ 1.06
IRF3-228ENST00000601291 KHNYNO15037 678 aaKnown RBP21.7■■□□□ 1.06
IRF3-228ENST00000601291 NUDT21O43809 227 aaKnown RBP21.7■■□□□ 1.06
IRF3-228ENST00000601291 KIAA0754O94854 1291 aa21.7■■□□□ 1.06
IRF3-228ENST00000601291 EPHA4P54764 986 aa21.7■■□□□ 1.06
IRF3-228ENST00000601291 ERVK-8P63133 956 aa21.7■■□□□ 1.06
IRF3-228ENST00000601291 IRX1P78414 480 aaPredicted RBP21.7■■□□□ 1.06
IRF3-228ENST00000601291 HMGCS1Q01581 520 aa21.7■■□□□ 1.06
IRF3-228ENST00000601291 MAD2L1Q13257 205 aaPredicted RBP21.7■■□□□ 1.06
IRF3-228ENST00000601291 UBAP2LQ14157 1087 aaKnown RBP21.7■■□□□ 1.06
IRF3-228ENST00000601291 SLC5A12Q1EHB4 618 aa21.7■■□□□ 1.06
IRF3-228ENST00000601291 SMU1Q2TAY7 513 aa21.7■■□□□ 1.06
IRF3-228ENST00000601291 C6orf136Q5SQH8 315 aa21.7■■□□□ 1.06
IRF3-228ENST00000601291 KIAA1614Q5VZ46 1190 aa21.7■■□□□ 1.06
IRF3-228ENST00000601291 FAM91A1Q658Y4 838 aa21.7■■□□□ 1.06
IRF3-228ENST00000601291 SPESP1Q6UW49 350 aa21.7■■□□□ 1.06
IRF3-228ENST00000601291 SLC35F3Q8IY50 421 aa21.7■■□□□ 1.06
IRF3-228ENST00000601291 FNDC5Q8NAU1 212 aa21.7■■□□□ 1.06
IRF3-228ENST00000601291 ZNF740Q8NDX6 193 aa21.7■■□□□ 1.06
IRF3-228ENST00000601291 OR4C6Q8NH72 309 aa21.7■■□□□ 1.06
IRF3-228ENST00000601291 FLVCR1-AS1Q8TAF5 88 aa21.7■■□□□ 1.06
IRF3-228ENST00000601291 LRTM1Q9HBL6 345 aa21.7■■□□□ 1.06
IRF3-228ENST00000601291 LRIT1Q9P2V4 623 aa21.7■■□□□ 1.06
IRF3-228ENST00000601291 FOXE1O00358 373 aaPredicted RBP21.69■■□□□ 1.06
IRF3-228ENST00000601291 TYRP1P17643 537 aa21.69■■□□□ 1.06
IRF3-228ENST00000601291 PIK3CBP42338 1070 aa21.69■■□□□ 1.06
IRF3-228ENST00000601291 STX1BP61266 288 aa21.69■■□□□ 1.06
IRF3-228ENST00000601291 AP5B1Q2VPB7 878 aa21.69■■□□□ 1.06
IRF3-228ENST00000601291 LAIR1Q6GTX8 287 aa21.69■■□□□ 1.06
IRF3-228ENST00000601291 FAM20CQ8IXL6 584 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms