RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 DPM1O60762 260 aa12.43□□□□□ -0.42
LIG1-212ENST00000596549 STATHP02808 62 aa12.43□□□□□ -0.42
LIG1-212ENST00000596549 PIM1P11309 404 aaPredicted RBP12.43□□□□□ -0.42
LIG1-212ENST00000596549 FDXRP22570 491 aa12.43□□□□□ -0.42
LIG1-212ENST00000596549 SOX8P57073 446 aa12.43□□□□□ -0.42
LIG1-212ENST00000596549 KLC1Q07866 573 aa12.43□□□□□ -0.42
LIG1-212ENST00000596549 SP140Q13342 867 aa12.43□□□□□ -0.42
LIG1-212ENST00000596549 HIF1AQ16665 826 aa12.43□□□□□ -0.42
LIG1-212ENST00000596549 MUM1Q2TAK8 710 aa12.43□□□□□ -0.42
LIG1-212ENST00000596549 PRAMEF13Q5VWM6 474 aa12.43□□□□□ -0.42
LIG1-212ENST00000596549 LRRC8EQ6NSJ5 796 aa12.43□□□□□ -0.42
LIG1-212ENST00000596549 PRMT9Q6P2P2 845 aa12.43□□□□□ -0.42
LIG1-212ENST00000596549 KIRREL2Q6UWL6 708 aa12.43□□□□□ -0.42
LIG1-212ENST00000596549 PDIK1LQ8N165 341 aa12.43□□□□□ -0.42
LIG1-212ENST00000596549 AMER3Q8N944 861 aa12.43□□□□□ -0.42
LIG1-212ENST00000596549 CPT1CQ8TCG5 803 aa12.43□□□□□ -0.42
LIG1-212ENST00000596549 STT3BQ8TCJ2 826 aa12.43□□□□□ -0.42
LIG1-212ENST00000596549 RUNDC3BQ96NL0 473 aa12.43□□□□□ -0.42
LIG1-212ENST00000596549 MFRPQ9BY79 579 aa12.43□□□□□ -0.42
LIG1-212ENST00000596549 TRIM31Q9BZY9 425 aa12.43□□□□□ -0.42
LIG1-212ENST00000596549 ZBTB20Q9HC78 741 aaPredicted RBP12.43□□□□□ -0.42
LIG1-212ENST00000596549 CCDC177Q9NQR7 707 aaPredicted RBP12.43□□□□□ -0.42
LIG1-212ENST00000596549 TAS2R13Q9NYV9 303 aa12.43□□□□□ -0.42
LIG1-212ENST00000596549 CDC23Q9UJX2 597 aa12.43□□□□□ -0.42
LIG1-212ENST00000596549 IKZF3Q9UKT9 509 aa12.43□□□□□ -0.42
LIG1-212ENST00000596549 MRPS2Q9Y399 296 aaKnown RBP12.43□□□□□ -0.42
LIG1-212ENST00000596549 PSAT1Q9Y617 370 aa12.43□□□□□ -0.42
LIG1-212ENST00000596549 SCN3AQ9NY46 2000 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 TTLL8A6PVC2 850 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 E7ESA3 106 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 FOXS1O43638 330 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 C8GP07360 202 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 FBLP22087 321 aaKnown RBP12.42□□□□□ -0.42
LIG1-212ENST00000596549 RPL21P46778 160 aaKnown RBP12.42□□□□□ -0.42
LIG1-212ENST00000596549 RGS4P49798 205 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 EMP3P54852 163 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 ABATP80404 500 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 MRPS25P82663 173 aaKnown RBP12.42□□□□□ -0.42
LIG1-212ENST00000596549 RELAQ04206 551 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 Q0VFX4 171 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 VWA2Q5GFL6 755 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 HECTD2Q5U5R9 776 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 UGT3A1Q6NUS8 523 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 VN1R4Q7Z5H5 301 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 ADCK2Q7Z695 626 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 HPS6Q86YV9 775 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 ANKMY2Q8IV38 441 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 PRSS58Q8IYP2 241 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 SHISA5Q8N114 240 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 MYO1HQ8N1T3 1032 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 OR11G2Q8NGC1 345 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 PNPLA2Q96AD5 504 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 NACC2Q96BF6 587 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 LRRC39Q96DD0 335 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 MVB12AQ96EY5 273 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 SNF8Q96H20 258 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 CRB3Q9BUF7 120 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 SEMA3GQ9NS98 782 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 C5AR2Q9P296 337 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 G3BP2Q9UN86 482 aaKnown RBP12.42□□□□□ -0.42
LIG1-212ENST00000596549 MAP4K5Q9Y4K4 846 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 CSAG2Q9Y5P2 127 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 FLNCQ14315 2725 aa12.42□□□□□ -0.42
LIG1-212ENST00000596549 EFCAB8A8MWE9 144 aa12.41□□□□□ -0.42
LIG1-212ENST00000596549 H7BY64 318 aa12.41□□□□□ -0.42
LIG1-212ENST00000596549 IGHEP01854 428 aa12.41□□□□□ -0.42
LIG1-212ENST00000596549 ZGLP1P0C6A0 271 aa12.41□□□□□ -0.42
LIG1-212ENST00000596549 ARL4CP56559 192 aa12.41□□□□□ -0.42
LIG1-212ENST00000596549 CSNK1G2P78368 415 aa12.41□□□□□ -0.42
LIG1-212ENST00000596549 AIMP2Q13155 320 aaKnown RBP12.41□□□□□ -0.42
LIG1-212ENST00000596549 DSG2Q14126 1118 aa12.41□□□□□ -0.42
LIG1-212ENST00000596549 FRG1Q14331 258 aaKnown RBP12.41□□□□□ -0.42
LIG1-212ENST00000596549 RBBP7Q16576 425 aa12.41□□□□□ -0.42
LIG1-212ENST00000596549 SYT16Q17RD7 645 aa12.41□□□□□ -0.42
LIG1-212ENST00000596549 TUBB8Q3ZCM7 444 aa12.41□□□□□ -0.42
LIG1-212ENST00000596549 THEMIS2Q5TEJ8 643 aa12.41□□□□□ -0.42
LIG1-212ENST00000596549 FAM45BPQ6NSW5 357 aa12.41□□□□□ -0.42
LIG1-212ENST00000596549 AGTRAPQ6RW13 159 aa12.41□□□□□ -0.42
LIG1-212ENST00000596549 TMEM207Q6UWW9 146 aa12.41□□□□□ -0.42
LIG1-212ENST00000596549 PRSS41Q7RTY9 318 aa12.41□□□□□ -0.42
LIG1-212ENST00000596549 LAPTM4BQ86VI4 370 aa12.41□□□□□ -0.42
LIG1-212ENST00000596549 C17orf53Q8N3J3 647 aaPredicted RBP12.41□□□□□ -0.42
LIG1-212ENST00000596549 GPATCH11Q8N954 259 aa12.41□□□□□ -0.42
LIG1-212ENST00000596549 FBXO36Q8NEA4 188 aa12.41□□□□□ -0.42
LIG1-212ENST00000596549 FAM45AQ8TCE6 357 aa12.41□□□□□ -0.42
LIG1-212ENST00000596549 C8orf44Q96CB5 159 aa12.41□□□□□ -0.42
LIG1-212ENST00000596549 CCDC138Q96M89 665 aa12.41□□□□□ -0.42
LIG1-212ENST00000596549 PRAP1Q96NZ9 151 aa12.41□□□□□ -0.42
LIG1-212ENST00000596549 KRT12Q99456 494 aa12.41□□□□□ -0.42
LIG1-212ENST00000596549 SGPP1Q9BX95 441 aa12.41□□□□□ -0.42
LIG1-212ENST00000596549 ATG10Q9H0Y0 220 aa12.41□□□□□ -0.42
LIG1-212ENST00000596549 PPANQ9NQ55 473 aaKnown RBP12.41□□□□□ -0.42
LIG1-212ENST00000596549 ZNF282Q9UDV7 671 aaPredicted RBP12.41□□□□□ -0.42
LIG1-212ENST00000596549 CORO1CQ9ULV4 474 aaPredicted RBP12.41□□□□□ -0.42
LIG1-212ENST00000596549 A0A0A6YYC8 382 aaPredicted RBP12.4□□□□□ -0.42
LIG1-212ENST00000596549 I3L1I5 382 aaPredicted RBP12.4□□□□□ -0.42
LIG1-212ENST00000596549 SLC16A5O15375 505 aa12.4□□□□□ -0.42
LIG1-212ENST00000596549 COX6A1P12074 109 aa12.4□□□□□ -0.42
LIG1-212ENST00000596549 ZNF37AP17032 561 aaPredicted RBP12.4□□□□□ -0.42
LIG1-212ENST00000596549 GNLYP22749 145 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms