RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 STEAP4Q687X5 459 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 TMEM207Q6UWW9 146 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 SHISA6Q6ZSJ9 500 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 PLD3Q8IV08 490 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 CNTN4Q8IWV2 1026 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 SHISA5Q8N114 240 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 PDIK1LQ8N165 341 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 AMER2Q8N7J2 671 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 FBXO36Q8NEA4 188 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 C9orf43Q8TAL5 461 aaPredicted RBP9.28□□□□□ -0.92
TOP3A-211ENST00000581536 SMPDL3AQ92484 453 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 OLFM1Q99784 485 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 SELENOSQ9BQE4 189 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 FAM167BQ9BTA0 163 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 NDC1Q9BTX1 674 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 RAB11FIP5Q9BXF6 653 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 ING2Q9H160 280 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 MRPS30Q9NP92 439 aaKnown RBP9.28□□□□□ -0.92
TOP3A-211ENST00000581536 TXLNGQ9NUQ3 528 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 INTS7Q9NVH2 962 aaKnown RBP9.28□□□□□ -0.92
TOP3A-211ENST00000581536 SPATA7Q9P0W8 599 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 IFT80Q9P2H3 777 aaPredicted RBP9.28□□□□□ -0.92
TOP3A-211ENST00000581536 KLHL42Q9P2K6 505 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 RNF14Q9UBS8 474 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 IKZF3Q9UKT9 509 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 PDE10AQ9Y233 779 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 VWA7Q9Y334 891 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 PTRH2Q9Y3E5 179 aaKnown RBP9.28□□□□□ -0.92
TOP3A-211ENST00000581536 HEMK1Q9Y5R4 338 aaPredicted RBP9.28□□□□□ -0.92
TOP3A-211ENST00000581536 PSAT1Q9Y617 370 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 COMMD10Q9Y6G5 202 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 MAU2Q9Y6X3 613 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 RELNP78509 3460 aa9.28□□□□□ -0.92
TOP3A-211ENST00000581536 HYKKA2RU49 373 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 OR2A25A4D2G3 310 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 CXorf49A8MYA2 514 aaPredicted RBP9.27□□□□□ -0.93
TOP3A-211ENST00000581536 H0YGG7 62 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 J3QKU1 62 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 STATHP02808 62 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 SAT1P21673 171 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 IMPA1P29218 277 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 CMPK1P30085 196 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 SSTR1P30872 391 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 SKIV2L2P42285 1042 aaKnown RBP9.27□□□□□ -0.93
TOP3A-211ENST00000581536 PMS2P54278 862 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 ARL4CP56559 192 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 ARF3P61204 181 aaPredicted RBP9.27□□□□□ -0.93
TOP3A-211ENST00000581536 ETF1P62495 437 aaKnown RBP9.27□□□□□ -0.93
TOP3A-211ENST00000581536 PRDX1Q06830 199 aaKnown RBP9.27□□□□□ -0.93
TOP3A-211ENST00000581536 SSPNQ14714 243 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 IGFBP7Q16270 282 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 CAPN12Q6ZSI9 719 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 COX15Q7KZN9 410 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 PAQR7Q86WK9 346 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 APLFQ8IW19 511 aaPredicted RBP9.27□□□□□ -0.93
TOP3A-211ENST00000581536 ALDH16A1Q8IZ83 802 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 RAB42Q8N4Z0 105 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 GPATCH11Q8N954 259 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 FBXO15Q8NCQ5 510 aaPredicted RBP9.27□□□□□ -0.93
TOP3A-211ENST00000581536 THAP4Q8WY91 577 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 ALKBH8Q96BT7 664 aaKnown RBP9.27□□□□□ -0.93
TOP3A-211ENST00000581536 ZNF285Q96NJ3 590 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 RUNDC3BQ96NL0 473 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 DPH2Q9BQC3 489 aaPredicted RBP9.27□□□□□ -0.93
TOP3A-211ENST00000581536 PLCD4Q9BRC7 762 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 MESP1Q9BRJ9 268 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 ERP44Q9BS26 406 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 NAT9Q9BTE0 207 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 PHACTR1Q9C0D0 580 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 ATG10Q9H0Y0 220 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 SMYD2Q9NRG4 433 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 CUTCQ9NTM9 273 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 TAS2R13Q9NYV9 303 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 MOCS1Q9NZB8 636 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 GRHL1Q9NZI5 618 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 TAC3Q9UHF0 121 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 GPN3Q9UHW5 284 aaPredicted RBP9.27□□□□□ -0.93
TOP3A-211ENST00000581536 TRMT6Q9UJA5 497 aaKnown RBP9.27□□□□□ -0.93
TOP3A-211ENST00000581536 TUBD1Q9UJT1 453 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 SH2B3Q9UQQ2 575 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 KLK4Q9Y5K2 254 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 MRFAP1Q9Y605 127 aa9.27□□□□□ -0.93
TOP3A-211ENST00000581536 FITM1A5D6W6 292 aa9.26□□□□□ -0.93
TOP3A-211ENST00000581536 C9J4A7 227 aa9.26□□□□□ -0.93
TOP3A-211ENST00000581536 E7ESA3 106 aa9.26□□□□□ -0.93
TOP3A-211ENST00000581536 H7BY64 318 aa9.26□□□□□ -0.93
TOP3A-211ENST00000581536 DSCR3O14972 297 aa9.26□□□□□ -0.93
TOP3A-211ENST00000581536 LCMT2O60294 686 aaKnown RBP9.26□□□□□ -0.93
TOP3A-211ENST00000581536 SRPX2O60687 465 aaPredicted RBP9.26□□□□□ -0.93
TOP3A-211ENST00000581536 RFPL1O75677 317 aa9.26□□□□□ -0.93
TOP3A-211ENST00000581536 TSPAN12O95859 305 aa9.26□□□□□ -0.93
TOP3A-211ENST00000581536 UMODP07911 640 aa9.26□□□□□ -0.93
TOP3A-211ENST00000581536 ENO3P13929 434 aaPredicted RBP9.26□□□□□ -0.93
TOP3A-211ENST00000581536 ARSFP54793 590 aa9.26□□□□□ -0.93
TOP3A-211ENST00000581536 RAPSNQ13702 412 aa9.26□□□□□ -0.93
TOP3A-211ENST00000581536 ATP1A4Q13733 1029 aa9.26□□□□□ -0.93
TOP3A-211ENST00000581536 ZNF460Q14592 562 aa9.26□□□□□ -0.93
TOP3A-211ENST00000581536 GRM7Q14831 915 aa9.26□□□□□ -0.93
TOP3A-211ENST00000581536 ARHGAP19Q14CB8 494 aa9.26□□□□□ -0.93
TOP3A-211ENST00000581536 NKG7Q16617 165 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms