RNA–Protein interactions for RNA: ENST00000576202.1

TSR1-205, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-205ENST00000576202 I3L1I5 382 aaPredicted RBP12.37□□□□□ -0.43
TSR1-205ENST00000576202 FOXS1O43638 330 aa12.37□□□□□ -0.43
TSR1-205ENST00000576202 WISP2O76076 250 aa12.37□□□□□ -0.43
TSR1-205ENST00000576202 C8orf89P0DMQ9 161 aa12.37□□□□□ -0.43
TSR1-205ENST00000576202 RPS3P23396 243 aaKnown RBP eCLIP12.37□□□□□ -0.43
TSR1-205ENST00000576202 STIP1P31948 543 aaKnown RBP12.37□□□□□ -0.43
TSR1-205ENST00000576202 RPA3P35244 121 aaPredicted RBP12.37□□□□□ -0.43
TSR1-205ENST00000576202 FDFT1P37268 417 aa12.37□□□□□ -0.43
TSR1-205ENST00000576202 EFNA3P52797 238 aa12.37□□□□□ -0.43
TSR1-205ENST00000576202 SYT16Q17RD7 645 aa12.37□□□□□ -0.43
TSR1-205ENST00000576202 ZNF766Q5HY98 468 aa12.37□□□□□ -0.43
TSR1-205ENST00000576202 LRRC8BQ6P9F7 803 aa12.37□□□□□ -0.43
TSR1-205ENST00000576202 SUSD1Q6UWL2 747 aa12.37□□□□□ -0.43
TSR1-205ENST00000576202 PAQR7Q86WK9 346 aa12.37□□□□□ -0.43
TSR1-205ENST00000576202 MPP5Q8N3R9 675 aa12.37□□□□□ -0.43
TSR1-205ENST00000576202 ARHGEF39Q8N4T4 335 aa12.37□□□□□ -0.43
TSR1-205ENST00000576202 UBL4BQ8N7F7 174 aa12.37□□□□□ -0.43
TSR1-205ENST00000576202 THAP3Q8WTV1 239 aaPredicted RBP12.37□□□□□ -0.43
TSR1-205ENST00000576202 METTL21AQ8WXB1 218 aa12.37□□□□□ -0.43
TSR1-205ENST00000576202 SMPDL3AQ92484 453 aa12.37□□□□□ -0.43
TSR1-205ENST00000576202 RERGQ96A58 199 aaPredicted RBP12.37□□□□□ -0.43
TSR1-205ENST00000576202 MTFMTQ96DP5 389 aaKnown RBP12.37□□□□□ -0.43
TSR1-205ENST00000576202 MAGED4Q96JG8 741 aa12.37□□□□□ -0.43
TSR1-205ENST00000576202 OR2A5Q96R48 311 aa12.37□□□□□ -0.43
TSR1-205ENST00000576202 DRC3Q9H069 523 aa12.37□□□□□ -0.43
TSR1-205ENST00000576202 CHRAC1Q9NRG0 131 aa12.37□□□□□ -0.43
TSR1-205ENST00000576202 TINAGQ9UJW2 476 aa12.37□□□□□ -0.43
TSR1-205ENST00000576202 AMFRQ9UKV5 643 aa12.37□□□□□ -0.43
TSR1-205ENST00000576202 PCDHGB6Q9Y5F9 930 aa12.37□□□□□ -0.43
TSR1-205ENST00000576202 EPN1Q9Y6I3 576 aaPredicted RBP12.37□□□□□ -0.43
TSR1-205ENST00000576202 NCOA6Q14686 2063 aaPredicted RBP12.36□□□□□ -0.43
TSR1-205ENST00000576202 IGKV1-8A0A0C4DH67 115 aa12.36□□□□□ -0.43
TSR1-205ENST00000576202 A0A0U1RQJ8 604 aa12.36□□□□□ -0.43
TSR1-205ENST00000576202 A8MUI8 341 aa12.36□□□□□ -0.43
TSR1-205ENST00000576202 MIF4GDA9UHW6 222 aaKnown RBP12.36□□□□□ -0.43
TSR1-205ENST00000576202 TXNDC9O14530 226 aa12.36□□□□□ -0.43
TSR1-205ENST00000576202 NDUFS3O75489 264 aa12.36□□□□□ -0.43
TSR1-205ENST00000576202 IPO7O95373 1038 aaKnown RBP12.36□□□□□ -0.43
TSR1-205ENST00000576202 MATN4O95460 622 aa12.36□□□□□ -0.43
TSR1-205ENST00000576202 CLDN14O95500 239 aa12.36□□□□□ -0.43
TSR1-205ENST00000576202 MLYCDO95822 493 aa12.36□□□□□ -0.43
TSR1-205ENST00000576202 ERGP11308 486 aa12.36□□□□□ -0.43
TSR1-205ENST00000576202 PKMP14618 531 aaKnown RBP12.36□□□□□ -0.43
TSR1-205ENST00000576202 EZRP15311 586 aaKnown RBP12.36□□□□□ -0.43
TSR1-205ENST00000576202 EIF3BP55884 814 aaKnown RBP12.36□□□□□ -0.43
TSR1-205ENST00000576202 ANKRD20A4Q4UJ75 823 aa12.36□□□□□ -0.43
TSR1-205ENST00000576202 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.36□□□□□ -0.43
TSR1-205ENST00000576202 CTSL3PQ5NE16 218 aa12.36□□□□□ -0.43
TSR1-205ENST00000576202 PEX26Q7Z412 305 aa12.36□□□□□ -0.43
TSR1-205ENST00000576202 RNF214Q8ND24 703 aa12.36□□□□□ -0.43
TSR1-205ENST00000576202 OR9A1PQ8NGU1 263 aa12.36□□□□□ -0.43
TSR1-205ENST00000576202 ADAMTS18Q8TE60 1221 aa12.36□□□□□ -0.43
TSR1-205ENST00000576202 ATG4AQ8WYN0 398 aa12.36□□□□□ -0.43
TSR1-205ENST00000576202 GPR137Q96N19 417 aa12.36□□□□□ -0.43
TSR1-205ENST00000576202 LACRTQ9GZZ8 138 aa12.36□□□□□ -0.43
TSR1-205ENST00000576202 UTP6Q9NYH9 597 aaKnown RBP12.36□□□□□ -0.43
TSR1-205ENST00000576202 TSR3Q9UJK0 312 aaKnown RBP12.36□□□□□ -0.43
TSR1-205ENST00000576202 PACSIN2Q9UNF0 486 aaPredicted RBP12.36□□□□□ -0.43
TSR1-205ENST00000576202 ZNF835Q9Y2P0 537 aa12.36□□□□□ -0.43
TSR1-205ENST00000576202 REXO2Q9Y3B8 237 aaKnown RBP12.36□□□□□ -0.43
TSR1-205ENST00000576202 SOWAHDA6NJG2 315 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 FAM227AF5H4B4 570 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 TTI1O43156 1089 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 SEC24DO94855 1032 aaPredicted RBP12.35□□□□□ -0.43
TSR1-205ENST00000576202 CCNDBP1O95273 360 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 IFNB1P01574 187 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 CYC1P08574 325 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 CAPN3P20807 821 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 ATP5DP30049 168 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 KIR3DL1P43629 444 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 AVPR1BP47901 424 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 KRTAP10-9P60411 292 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 MAT1AQ00266 395 aaKnown RBP12.35□□□□□ -0.43
TSR1-205ENST00000576202 PRDX1Q06830 199 aaKnown RBP12.35□□□□□ -0.43
TSR1-205ENST00000576202 TSTA3Q13630 321 aaPredicted RBP12.35□□□□□ -0.43
TSR1-205ENST00000576202 FAM53BQ14153 422 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 GBX1Q14549 363 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 CDSNQ15517 529 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 TESK1Q15569 626 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 OASLQ15646 514 aaKnown RBP12.35□□□□□ -0.43
TSR1-205ENST00000576202 BTBD16Q32M84 506 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 KRTCAP3Q53RY4 240 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 PCID2Q5JVF3 399 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 ACER2Q5QJU3 275 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 ICE2Q659A1 982 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 PLAG1Q6DJT9 500 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 ZNF425Q6IV72 752 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 Q6ZPB1 254 aaPredicted RBP12.35□□□□□ -0.43
TSR1-205ENST00000576202 SPPL2CQ8IUH8 684 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 BEST3Q8N1M1 668 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 C14orf79Q96F83 325 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 ZNF354BQ96LW1 612 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 BIRC8Q96P09 236 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 VN1R1Q9GZP7 353 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 GPAMQ9HCL2 828 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 RAB6BQ9NRW1 208 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 TREX1Q9NSU2 369 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 TAC3Q9UHF0 121 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 PCYOX1Q9UHG3 505 aa12.35□□□□□ -0.43
TSR1-205ENST00000576202 MEMO1Q9Y316 297 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms