RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 TEX19Q8NA77 164 aa16.5■□□□□ 0.23
SMG6-212ENST00000573153 EEF1AKMT1Q8WVE0 214 aa16.5■□□□□ 0.23
SMG6-212ENST00000573153 OLFM1Q99784 485 aa16.5■□□□□ 0.23
SMG6-212ENST00000573153 ERP44Q9BS26 406 aa16.5■□□□□ 0.23
SMG6-212ENST00000573153 ZBTB20Q9HC78 741 aaPredicted RBP16.5■□□□□ 0.23
SMG6-212ENST00000573153 MRPS30Q9NP92 439 aaKnown RBP16.5■□□□□ 0.23
SMG6-212ENST00000573153 IRAK4Q9NWZ3 460 aa16.5■□□□□ 0.23
SMG6-212ENST00000573153 MOCS1Q9NZB8 636 aa16.5■□□□□ 0.23
SMG6-212ENST00000573153 WHRNQ9P202 907 aa16.5■□□□□ 0.23
SMG6-212ENST00000573153 PSAT1Q9Y617 370 aa16.5■□□□□ 0.23
SMG6-212ENST00000573153 MAU2Q9Y6X3 613 aa16.5■□□□□ 0.23
SMG6-212ENST00000573153 HECTD1Q9ULT8 2610 aa16.49■□□□□ 0.23
SMG6-212ENST00000573153 A6NL46 340 aa16.49■□□□□ 0.23
SMG6-212ENST00000573153 AGPSO00116 658 aa16.49■□□□□ 0.23
SMG6-212ENST00000573153 FDXRP22570 491 aa16.49■□□□□ 0.23
SMG6-212ENST00000573153 RRADP55042 308 aa16.49■□□□□ 0.23
SMG6-212ENST00000573153 TBPL1P62380 186 aa16.49■□□□□ 0.23
SMG6-212ENST00000573153 Q0VFX4 171 aa16.49■□□□□ 0.23
SMG6-212ENST00000573153 RAPSNQ13702 412 aa16.49■□□□□ 0.23
SMG6-212ENST00000573153 MYBPC3Q14896 1274 aa16.49■□□□□ 0.23
SMG6-212ENST00000573153 FAM214AQ32MH5 1076 aa16.49■□□□□ 0.23
SMG6-212ENST00000573153 SLC6A19Q695T7 634 aa16.49■□□□□ 0.23
SMG6-212ENST00000573153 JMJD6Q6NYC1 403 aaPredicted RBP16.49■□□□□ 0.23
SMG6-212ENST00000573153 TMEM207Q6UWW9 146 aa16.49■□□□□ 0.23
SMG6-212ENST00000573153 SHISA6Q6ZSJ9 500 aa16.49■□□□□ 0.23
SMG6-212ENST00000573153 UBE2R2Q712K3 238 aaPredicted RBP16.49■□□□□ 0.23
SMG6-212ENST00000573153 PLD3Q8IV08 490 aa16.49■□□□□ 0.23
SMG6-212ENST00000573153 TTC29Q8NA56 475 aaPredicted RBP16.49■□□□□ 0.23
SMG6-212ENST00000573153 NACC2Q96BF6 587 aa16.49■□□□□ 0.23
SMG6-212ENST00000573153 CFAP36Q96G28 342 aa16.49■□□□□ 0.23
SMG6-212ENST00000573153 TRIM31Q9BZY9 425 aa16.49■□□□□ 0.23
SMG6-212ENST00000573153 SOX17Q9H6I2 414 aaPredicted RBP16.49■□□□□ 0.23
SMG6-212ENST00000573153 GPR83Q9NYM4 423 aa16.49■□□□□ 0.23
SMG6-212ENST00000573153 GPN3Q9UHW5 284 aaPredicted RBP16.49■□□□□ 0.23
SMG6-212ENST00000573153 ZNF451Q9Y4E5 1061 aa16.49■□□□□ 0.23
SMG6-212ENST00000573153 MAP4K5Q9Y4K4 846 aa16.49■□□□□ 0.23
SMG6-212ENST00000573153 DOCK10Q96BY6 2186 aa16.48■□□□□ 0.23
SMG6-212ENST00000573153 A0A1W2PQ72 361 aa16.48■□□□□ 0.23
SMG6-212ENST00000573153 PIM1P11309 404 aaPredicted RBP16.48■□□□□ 0.23
SMG6-212ENST00000573153 EZRP15311 586 aaKnown RBP16.48■□□□□ 0.23
SMG6-212ENST00000573153 CASQ1P31415 396 aa16.48■□□□□ 0.23
SMG6-212ENST00000573153 UQCRFS1P47985 274 aa16.48■□□□□ 0.23
SMG6-212ENST00000573153 MGAT5Q09328 741 aa16.48■□□□□ 0.23
SMG6-212ENST00000573153 ILF2Q12905 390 aaKnown RBP16.48■□□□□ 0.23
SMG6-212ENST00000573153 CRB2Q5IJ48 1285 aa16.48■□□□□ 0.23
SMG6-212ENST00000573153 VWA5B1Q5TIE3 1220 aa16.48■□□□□ 0.23
SMG6-212ENST00000573153 IGFL3Q6UXB1 125 aa16.48■□□□□ 0.23
SMG6-212ENST00000573153 SLC26A11Q86WA9 606 aa16.48■□□□□ 0.23
SMG6-212ENST00000573153 GALNT16Q8N428 558 aa16.48■□□□□ 0.23
SMG6-212ENST00000573153 AMER2Q8N7J2 671 aa16.48■□□□□ 0.23
SMG6-212ENST00000573153 FBXO36Q8NEA4 188 aa16.48■□□□□ 0.23
SMG6-212ENST00000573153 MCOLN3Q8TDD5 553 aa16.48■□□□□ 0.23
SMG6-212ENST00000573153 PDLIM5Q96HC4 596 aaKnown RBP16.48■□□□□ 0.23
SMG6-212ENST00000573153 CCDC138Q96M89 665 aa16.48■□□□□ 0.23
SMG6-212ENST00000573153 SGPP1Q9BX95 441 aa16.48■□□□□ 0.23
SMG6-212ENST00000573153 PHACTR1Q9C0D0 580 aa16.48■□□□□ 0.23
SMG6-212ENST00000573153 PARVBQ9HBI1 364 aa16.48■□□□□ 0.23
SMG6-212ENST00000573153 UTP6Q9NYH9 597 aaKnown RBP16.48■□□□□ 0.23
SMG6-212ENST00000573153 FBXL4Q9UKA2 621 aa16.48■□□□□ 0.23
SMG6-212ENST00000573153 VWA7Q9Y334 891 aa16.48■□□□□ 0.23
SMG6-212ENST00000573153 SNX24Q9Y343 169 aa16.48■□□□□ 0.23
SMG6-212ENST00000573153 USP9XQ93008 2570 aaPredicted RBP16.48■□□□□ 0.23
SMG6-212ENST00000573153 FFAR3O14843 346 aa16.47■□□□□ 0.23
SMG6-212ENST00000573153 EIF3HO15372 352 aaKnown RBP eCLIP16.47■□□□□ 0.23
SMG6-212ENST00000573153 GPR42O15529 346 aa16.47■□□□□ 0.23
SMG6-212ENST00000573153 RAD51CO43502 376 aa16.47■□□□□ 0.23
SMG6-212ENST00000573153 C1QAP02745 245 aa16.47■□□□□ 0.23
SMG6-212ENST00000573153 HRH2P25021 359 aa16.47■□□□□ 0.23
SMG6-212ENST00000573153 MRPS25P82663 173 aaKnown RBP16.47■□□□□ 0.23
SMG6-212ENST00000573153 KLC1Q07866 573 aa16.47■□□□□ 0.23
SMG6-212ENST00000573153 PDIA2Q13087 525 aaKnown RBP16.47■□□□□ 0.23
SMG6-212ENST00000573153 HECTD2Q5U5R9 776 aa16.47■□□□□ 0.23
SMG6-212ENST00000573153 DUPD1Q68J44 220 aa16.47■□□□□ 0.23
SMG6-212ENST00000573153 FAM45BPQ6NSW5 357 aa16.47■□□□□ 0.23
SMG6-212ENST00000573153 LAPTM4BQ86VI4 370 aa16.47■□□□□ 0.23
SMG6-212ENST00000573153 MYO1HQ8N1T3 1032 aa16.47■□□□□ 0.23
SMG6-212ENST00000573153 C17orf53Q8N3J3 647 aaPredicted RBP16.47■□□□□ 0.23
SMG6-212ENST00000573153 CSNK1A1LQ8N752 337 aa16.47■□□□□ 0.23
SMG6-212ENST00000573153 OR11G2Q8NGC1 345 aa16.47■□□□□ 0.23
SMG6-212ENST00000573153 FAM45AQ8TCE6 357 aa16.47■□□□□ 0.23
SMG6-212ENST00000573153 STT3BQ8TCJ2 826 aa16.47■□□□□ 0.23
SMG6-212ENST00000573153 FER1L6-AS2Q96M78 137 aa16.47■□□□□ 0.23
SMG6-212ENST00000573153 PCBD2Q9H0N5 130 aa16.47■□□□□ 0.23
SMG6-212ENST00000573153 ZNF304Q9HCX3 659 aa16.47■□□□□ 0.23
SMG6-212ENST00000573153 PPANQ9NQ55 473 aaKnown RBP16.47■□□□□ 0.23
SMG6-212ENST00000573153 SMYD2Q9NRG4 433 aa16.47■□□□□ 0.23
SMG6-212ENST00000573153 LUZP4Q9P127 313 aa16.47■□□□□ 0.23
SMG6-212ENST00000573153 ZFATQ9P243 1243 aa16.47■□□□□ 0.23
SMG6-212ENST00000573153 C5AR2Q9P296 337 aa16.47■□□□□ 0.23
SMG6-212ENST00000573153 NXT1Q9UKK6 140 aaKnown RBP16.47■□□□□ 0.23
SMG6-212ENST00000573153 CSAG2Q9Y5P2 127 aa16.47■□□□□ 0.23
SMG6-212ENST00000573153 H7BY64 318 aa16.46■□□□□ 0.23
SMG6-212ENST00000573153 WISP3O95389 354 aaPredicted RBP16.46■□□□□ 0.23
SMG6-212ENST00000573153 SYF2O95926 243 aaKnown RBP16.46■□□□□ 0.23
SMG6-212ENST00000573153 IGHEP01854 428 aa16.46■□□□□ 0.23
SMG6-212ENST00000573153 EIF2S1P05198 315 aaKnown RBP16.46■□□□□ 0.23
SMG6-212ENST00000573153 ZGLP1P0C6A0 271 aa16.46■□□□□ 0.23
SMG6-212ENST00000573153 SLC26A3P40879 764 aa16.46■□□□□ 0.23
SMG6-212ENST00000573153 IL2P60568 153 aa16.46■□□□□ 0.23
SMG6-212ENST00000573153 CSNK1G2P78368 415 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms