RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 DENND6BQ8NEG7 585 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 TSPEARQ8WU66 669 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 SLC13A3Q8WWT9 602 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 JADE3Q92613 823 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 BIRC7Q96CA5 298 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 RSRC1Q96IZ7 334 aaKnown RBP6.81□□□□□ -1.32
SMG1-215ENST00000568239 HAUS8Q9BT25 410 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 OR51B5Q9H339 312 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 S100A14Q9HCY8 104 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 SLC52A3Q9NQ40 469 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 CUEDC1Q9NWM3 386 aaPredicted RBP6.81□□□□□ -1.32
SMG1-215ENST00000568239 TMEM181Q9P2C4 612 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 STX18Q9P2W9 335 aaKnown RBP6.81□□□□□ -1.32
SMG1-215ENST00000568239 TBC1D29Q9UFV1 150 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 BCAP29Q9UHQ4 241 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 ANGPTL2Q9UKU9 493 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 FEZF1A0PJY2 475 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 FXYD1O00168 92 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 NME4O00746 187 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 SERPIND1P05546 499 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 PRPS2P11908 318 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 S100A3P33764 101 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 DMPKQ09013 629 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 GAS6Q14393 721 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 TLR1Q15399 786 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 CYP2A13Q16696 494 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 LEXMQ3ZCV2 418 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 ATG9BQ674R7 924 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 PRMT9Q6P2P2 845 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 TMIGD1Q6UXZ0 262 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 GCNT7Q6ZNI0 430 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 RNF165Q6ZSG1 346 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 SLC15A3Q8IY34 581 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 MINDY1Q8N5J2 469 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 GLB1L3Q8NCI6 653 aaPredicted RBP6.81□□□□□ -1.32
SMG1-215ENST00000568239 OR13H1Q8NG92 308 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 SETD7Q8WTS6 366 aaKnown RBP6.81□□□□□ -1.32
SMG1-215ENST00000568239 SMPDL3AQ92484 453 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 ASB9Q96DX5 294 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 LRGUKQ96M69 825 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 CAMK1GQ96NX5 476 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 PRDM6Q9NQX0 595 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 AASDHPPTQ9NRN7 309 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 SCHIP1Q9P0W5 487 aaPredicted RBP6.81□□□□□ -1.32
SMG1-215ENST00000568239 USP36Q9P275 1121 aaKnown RBP6.81□□□□□ -1.32
SMG1-215ENST00000568239 MRPS17Q9Y2R5 130 aaKnown RBP6.81□□□□□ -1.32
SMG1-215ENST00000568239 TMED5Q9Y3A6 229 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 SNRNP200O75643 2136 aaKnown RBP6.81□□□□□ -1.32
SMG1-215ENST00000568239 DYTNA2CJ06 578 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 KRBA1A5PL33 1030 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 ZNF839A8K0R7 811 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 MAP3K7O43318 606 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 KCNH1O95259 989 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 EML2O95834 649 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 IL6P05231 212 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 ANXA4P09525 319 aaPredicted RBP6.81□□□□□ -1.32
SMG1-215ENST00000568239 RAB28P51157 221 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 MTPNP58546 118 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 KIAA1024LP59773 190 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 SRP54P61011 504 aaKnown RBP6.81□□□□□ -1.32
SMG1-215ENST00000568239 LRRC32Q14392 662 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 ARHGAP19Q14CB8 494 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 RPE65Q16518 533 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 MUM1Q2TAK8 710 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 SMU1Q2TAY7 513 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 COQ5Q5HYK3 327 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 NANOGP8Q6NSW7 305 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 LCTLQ6UWM7 567 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 PLD3Q8IV08 490 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 KIAA2013Q8IYS2 634 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 KRT78Q8N1N4 520 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 LINC01555Q8NAE3 123 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 OR52E1Q8NGJ3 308 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 ASB12Q8WXK4 309 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 GPATCH1Q9BRR8 931 aaKnown RBP6.81□□□□□ -1.32
SMG1-215ENST00000568239 NANOGQ9H9S0 305 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 WDR70Q9NW82 654 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 SPATA6Q9NWH7 488 aaPredicted RBP6.81□□□□□ -1.32
SMG1-215ENST00000568239 CMTM6Q9NX76 183 aa6.81□□□□□ -1.32
SMG1-215ENST00000568239 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.81□□□□□ -1.32
SMG1-215ENST00000568239 PNMA8BQ9ULN7 279 aaPredicted RBP6.81□□□□□ -1.32
SMG1-215ENST00000568239 ANKDD1BA6NHY2 528 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 PRAMEF26H0Y7S4 382 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 BCAS2O75934 225 aaPredicted RBP6.8□□□□□ -1.32
SMG1-215ENST00000568239 B3GALT4O96024 378 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 IGHV4-34P06331 123 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 GSNP06396 782 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 COX7A2P14406 83 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 CD6P30203 668 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 HSD17B2P37059 387 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 MRPL19P49406 292 aaKnown RBP6.8□□□□□ -1.32
SMG1-215ENST00000568239 CLDN8P56748 225 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 PHEXP78562 749 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 PLCL1Q15111 1095 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 HKDC1Q2TB90 917 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 ANKRD26P1Q6NSI1 321 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 AAGABQ6PD74 315 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 LRRC74BQ6ZQY2 392 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 GPR180Q86V85 440 aa6.8□□□□□ -1.32
SMG1-215ENST00000568239 DHFR2Q86XF0 187 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms