RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 MFSD3Q96ES6 412 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 BIRC8Q96P09 236 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 TAAR6Q96RI8 345 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 DRC3Q9H069 523 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 MKKSQ9NPJ1 570 aaPredicted RBP12.34□□□□□ -0.43
SF3B3-202ENST00000562722 SYBUQ9NX95 663 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 PCYOX1Q9UHG3 505 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 SH3BGRL2Q9UJC5 107 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 MKL2Q9ULH7 1088 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 CENPEQ02224 2701 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 ITPR2Q14571 2701 aa12.34□□□□□ -0.43
SF3B3-202ENST00000562722 MYO1CO00159 1063 aa12.33□□□□□ -0.44
SF3B3-202ENST00000562722 RASAL1O95294 804 aa12.33□□□□□ -0.44
SF3B3-202ENST00000562722 WDPCPO95876 746 aa12.33□□□□□ -0.44
SF3B3-202ENST00000562722 CRYABP02511 175 aaKnown RBP12.33□□□□□ -0.44
SF3B3-202ENST00000562722 MYBL2P10244 700 aa12.33□□□□□ -0.44
SF3B3-202ENST00000562722 ICAM2P13598 275 aa12.33□□□□□ -0.44
SF3B3-202ENST00000562722 EZRP15311 586 aaKnown RBP12.33□□□□□ -0.44
SF3B3-202ENST00000562722 ARNTP27540 789 aa12.33□□□□□ -0.44
SF3B3-202ENST00000562722 HSD17B2P37059 387 aa12.33□□□□□ -0.44
SF3B3-202ENST00000562722 PNLIPRP1P54315 467 aa12.33□□□□□ -0.44
SF3B3-202ENST00000562722 MAT1AQ00266 395 aaKnown RBP12.33□□□□□ -0.44
SF3B3-202ENST00000562722 ARHGAP19Q14CB8 494 aa12.33□□□□□ -0.44
SF3B3-202ENST00000562722 RPS6KA1Q15418 735 aa12.33□□□□□ -0.44
SF3B3-202ENST00000562722 SYT16Q17RD7 645 aa12.33□□□□□ -0.44
SF3B3-202ENST00000562722 GARNL3Q5VVW2 1013 aa12.33□□□□□ -0.44
SF3B3-202ENST00000562722 ICE2Q659A1 982 aa12.33□□□□□ -0.44
SF3B3-202ENST00000562722 CASC4Q6P4E1 433 aa12.33□□□□□ -0.44
SF3B3-202ENST00000562722 TMEM207Q6UWW9 146 aa12.33□□□□□ -0.44
SF3B3-202ENST00000562722 C4orf22Q6V702 233 aa12.33□□□□□ -0.44
SF3B3-202ENST00000562722 RIPOR1Q6ZS17 1223 aa12.33□□□□□ -0.44
SF3B3-202ENST00000562722 NEK10Q6ZWH5 1172 aa12.33□□□□□ -0.44
SF3B3-202ENST00000562722 TMEM139Q8IV31 216 aa12.33□□□□□ -0.44
SF3B3-202ENST00000562722 MCEMP1Q8IX19 187 aa12.33□□□□□ -0.44
SF3B3-202ENST00000562722 AMER3Q8N944 861 aa12.33□□□□□ -0.44
SF3B3-202ENST00000562722 SPC24Q8NBT2 197 aa12.33□□□□□ -0.44
SF3B3-202ENST00000562722 METTL21AQ8WXB1 218 aa12.33□□□□□ -0.44
SF3B3-202ENST00000562722 HAS2Q92819 552 aa12.33□□□□□ -0.44
SF3B3-202ENST00000562722 PHF12Q96QT6 1004 aa12.33□□□□□ -0.44
SF3B3-202ENST00000562722 PKP4Q99569 1192 aa12.33□□□□□ -0.44
SF3B3-202ENST00000562722 TSGA10Q9BZW7 698 aa12.33□□□□□ -0.44
SF3B3-202ENST00000562722 RBSNQ9H1K0 784 aa12.33□□□□□ -0.44
SF3B3-202ENST00000562722 TEKT2Q9UIF3 430 aa12.33□□□□□ -0.44
SF3B3-202ENST00000562722 POLEQ07864 2286 aa12.33□□□□□ -0.44
SF3B3-202ENST00000562722 DOCK10Q96BY6 2186 aa12.33□□□□□ -0.44
SF3B3-202ENST00000562722 IGKV1-8A0A0C4DH67 115 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 A8MUI8 341 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 SMAPO00193 183 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 CCL21O00585 134 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 TXNDC9O14530 226 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 PRAMEF2O60811 474 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 PSIP1O75475 530 aaKnown RBP12.32□□□□□ -0.44
SF3B3-202ENST00000562722 STATHP02808 62 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 C8orf89P0DMQ9 161 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 ITGAMP11215 1152 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 ERGP11308 486 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 PAMP19021 973 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 ELAVL4P26378 380 aaKnown RBP12.32□□□□□ -0.44
SF3B3-202ENST00000562722 SLC26A3P40879 764 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 AVPR1BP47901 424 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 TDGF1P3P51864 188 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 SRSF11Q05519 484 aaKnown RBP12.32□□□□□ -0.44
SF3B3-202ENST00000562722 RBPJQ06330 500 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 PRDX1Q06830 199 aaKnown RBP12.32□□□□□ -0.44
SF3B3-202ENST00000562722 PCOLCEQ15113 449 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 CCNG2Q16589 344 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 NDUFA9Q16795 377 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 LONRF1Q17RB8 773 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 TYSND1Q2T9J0 566 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 TTLL9Q3SXZ7 439 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 MINDY4Q4G0A6 757 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 ZNF324BQ6AW86 544 aaPredicted RBP12.32□□□□□ -0.44
SF3B3-202ENST00000562722 PLD3Q8IV08 490 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 ZC3H7AQ8IWR0 971 aaKnown RBP12.32□□□□□ -0.44
SF3B3-202ENST00000562722 RELTQ969Z4 430 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 TCF12Q99081 682 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 TUBB6Q9BUF5 446 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 KIFC1Q9BW19 673 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 TGIF2Q9GZN2 237 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 ZNF700Q9H0M5 742 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 CCDC68Q9H2F9 335 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 SYNPO2LQ9H987 977 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 GALPQ9UBC7 116 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 SEC14L3Q9UDX4 400 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 VPS9D1Q9Y2B5 631 aa12.32□□□□□ -0.44
SF3B3-202ENST00000562722 CSMD1Q96PZ7 3565 aa12.31□□□□□ -0.44
SF3B3-202ENST00000562722 A0A1W2PQ72 361 aa12.31□□□□□ -0.44
SF3B3-202ENST00000562722 CTAGE9A4FU28 777 aa12.31□□□□□ -0.44
SF3B3-202ENST00000562722 OR5H15A6NDH6 313 aa12.31□□□□□ -0.44
SF3B3-202ENST00000562722 HAT1O14929 419 aa12.31□□□□□ -0.44
SF3B3-202ENST00000562722 P2RX6O15547 441 aa12.31□□□□□ -0.44
SF3B3-202ENST00000562722 FOXS1O43638 330 aa12.31□□□□□ -0.44
SF3B3-202ENST00000562722 SEC24DO94855 1032 aaPredicted RBP12.31□□□□□ -0.44
SF3B3-202ENST00000562722 SLC16A8O95907 504 aa12.31□□□□□ -0.44
SF3B3-202ENST00000562722 OGNP20774 298 aaKnown RBP12.31□□□□□ -0.44
SF3B3-202ENST00000562722 CASP6P55212 293 aa12.31□□□□□ -0.44
SF3B3-202ENST00000562722 ABATP80404 500 aa12.31□□□□□ -0.44
SF3B3-202ENST00000562722 CUL1Q13616 776 aa12.31□□□□□ -0.44
SF3B3-202ENST00000562722 GBX1Q14549 363 aa12.31□□□□□ -0.44
SF3B3-202ENST00000562722 KCNJ11Q14654 390 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms