RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 RERGQ96A58 199 aaPredicted RBP11.96□□□□□ -0.49
SLIRP-211ENST00000557623 ALKBH8Q96BT7 664 aaKnown RBP11.96□□□□□ -0.49
SLIRP-211ENST00000557623 DHRS4Q9BTZ2 278 aa11.96□□□□□ -0.49
SLIRP-211ENST00000557623 SGPP1Q9BX95 441 aa11.96□□□□□ -0.49
SLIRP-211ENST00000557623 NLNQ9BYT8 704 aa11.96□□□□□ -0.49
SLIRP-211ENST00000557623 AKIRIN1Q9H9L7 192 aaPredicted RBP11.96□□□□□ -0.49
SLIRP-211ENST00000557623 GPN3Q9UHW5 284 aaPredicted RBP11.96□□□□□ -0.49
SLIRP-211ENST00000557623 NFU1Q9UMS0 254 aa11.96□□□□□ -0.49
SLIRP-211ENST00000557623 FARSAQ9Y285 508 aaKnown RBP11.96□□□□□ -0.49
SLIRP-211ENST00000557623 IKBKGQ9Y6K9 419 aa11.96□□□□□ -0.49
SLIRP-211ENST00000557623 LAMA5O15230 3695 aa11.95□□□□□ -0.5
SLIRP-211ENST00000557623 A0A087WUV0 522 aaPredicted RBP11.95□□□□□ -0.5
SLIRP-211ENST00000557623 IGKV1-8A0A0C4DH67 115 aa11.95□□□□□ -0.5
SLIRP-211ENST00000557623 FITM1A5D6W6 292 aa11.95□□□□□ -0.5
SLIRP-211ENST00000557623 H7BY64 318 aa11.95□□□□□ -0.5
SLIRP-211ENST00000557623 ATXN7O15265 892 aaPredicted RBP11.95□□□□□ -0.5
SLIRP-211ENST00000557623 NKX2-8O15522 239 aa11.95□□□□□ -0.5
SLIRP-211ENST00000557623 INHBAP08476 426 aa11.95□□□□□ -0.5
SLIRP-211ENST00000557623 GRK3P35626 688 aa11.95□□□□□ -0.5
SLIRP-211ENST00000557623 SLC26A3P40879 764 aa11.95□□□□□ -0.5
SLIRP-211ENST00000557623 YBX1P67809 324 aaKnown RBP11.95□□□□□ -0.5
SLIRP-211ENST00000557623 TSNQ15631 228 aaKnown RBP11.95□□□□□ -0.5
SLIRP-211ENST00000557623 UAP1Q16222 522 aaPredicted RBP11.95□□□□□ -0.5
SLIRP-211ENST00000557623 PTCHD3Q3KNS1 767 aa11.95□□□□□ -0.5
SLIRP-211ENST00000557623 TAF1BQ53T94 588 aaPredicted RBP11.95□□□□□ -0.5
SLIRP-211ENST00000557623 WASHC2DQ5SRD0 308 aa11.95□□□□□ -0.5
SLIRP-211ENST00000557623 ZNF385CQ66K41 422 aaPredicted RBP11.95□□□□□ -0.5
SLIRP-211ENST00000557623 FRMPD2BQ6IN97 320 aa11.95□□□□□ -0.5
SLIRP-211ENST00000557623 C16orf46Q6P387 395 aa11.95□□□□□ -0.5
SLIRP-211ENST00000557623 LIAT1Q6ZQX7 453 aa11.95□□□□□ -0.5
SLIRP-211ENST00000557623 TRMT10CQ7L0Y3 403 aaKnown RBP11.95□□□□□ -0.5
SLIRP-211ENST00000557623 TAOK1Q7L7X3 1001 aa11.95□□□□□ -0.5
SLIRP-211ENST00000557623 TBC1D1Q86TI0 1168 aaPredicted RBP11.95□□□□□ -0.5
SLIRP-211ENST00000557623 SYVN1Q86TM6 617 aa11.95□□□□□ -0.5
SLIRP-211ENST00000557623 TCAIMQ8N3R3 496 aa11.95□□□□□ -0.5
SLIRP-211ENST00000557623 EIF1ADQ8N9N8 165 aaKnown RBP11.95□□□□□ -0.5
SLIRP-211ENST00000557623 TTC9Q92623 222 aa11.95□□□□□ -0.5
SLIRP-211ENST00000557623 UBXN10Q96LJ8 280 aa11.95□□□□□ -0.5
SLIRP-211ENST00000557623 PRAP1Q96NZ9 151 aa11.95□□□□□ -0.5
SLIRP-211ENST00000557623 GBP5Q96PP8 586 aa11.95□□□□□ -0.5
SLIRP-211ENST00000557623 EGFL8Q99944 293 aa11.95□□□□□ -0.5
SLIRP-211ENST00000557623 ACTL8Q9H568 366 aa11.95□□□□□ -0.5
SLIRP-211ENST00000557623 CUTCQ9NTM9 273 aa11.95□□□□□ -0.5
SLIRP-211ENST00000557623 DHCR7Q9UBM7 475 aaKnown RBP11.95□□□□□ -0.5
SLIRP-211ENST00000557623 IKZF3Q9UKT9 509 aa11.95□□□□□ -0.5
SLIRP-211ENST00000557623 PADI2Q9Y2J8 665 aa11.95□□□□□ -0.5
SLIRP-211ENST00000557623 MRPS18BQ9Y676 258 aaKnown RBP11.95□□□□□ -0.5
SLIRP-211ENST00000557623 SEC16AO15027 2179 aa11.95□□□□□ -0.5
SLIRP-211ENST00000557623 A0A087X1B8 175 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 LOC105369274A0A096LPK9 316 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 LOC102723532A0A0G2JNH3 316 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 A0A1B0GX78 115 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 HYKKA2RU49 373 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 H0YGG7 62 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 DSCR3O14972 297 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 ZZEF1O43149 2961 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 ZNF500O60304 480 aaPredicted RBP11.94□□□□□ -0.5
SLIRP-211ENST00000557623 EIF2S1P05198 315 aaKnown RBP11.94□□□□□ -0.5
SLIRP-211ENST00000557623 CTSBP07858 339 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 PRKAR1AP10644 381 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 CD1DP15813 335 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 NPPBP16860 134 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 ALAS2P22557 587 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 SERPINB9P50453 376 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 ARF3P61204 181 aaPredicted RBP11.94□□□□□ -0.5
SLIRP-211ENST00000557623 RPS15AP62244 130 aaKnown RBP11.94□□□□□ -0.5
SLIRP-211ENST00000557623 CYP4F2P78329 520 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 CSHL1Q14406 222 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 NCF4Q15080 339 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 CDKL4Q5MAI5 379 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 MROH9Q5TGP6 573 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 C1orf189Q5VU69 101 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 DESI1Q6ICB0 168 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 LCN10Q6JVE6 187 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 BORAQ6PGQ7 559 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 FAM198BQ6UWH4 519 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 TTLL10Q6ZVT0 673 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 CMC1Q7Z7K0 106 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 GPSM1Q86YR5 675 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 OR4N4Q8N0Y3 316 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 ENDOVQ8N8Q3 282 aaKnown RBP11.94□□□□□ -0.5
SLIRP-211ENST00000557623 SLC44A1Q8WWI5 657 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 KIAA1191Q96A73 305 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 PYCR2Q96C36 320 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 MRRFQ96E11 262 aaKnown RBP11.94□□□□□ -0.5
SLIRP-211ENST00000557623 OR2A5Q96R48 311 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 ARHGAP9Q9BRR9 750 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 NMRAL1Q9HBL8 299 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 CUEDC1Q9NWM3 386 aaPredicted RBP11.94□□□□□ -0.5
SLIRP-211ENST00000557623 IFT80Q9P2H3 777 aaPredicted RBP11.94□□□□□ -0.5
SLIRP-211ENST00000557623 NDOR1Q9UHB4 597 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 TLK1Q9UKI8 766 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 ACOT9Q9Y305 439 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 DYRK1BQ9Y463 629 aa11.94□□□□□ -0.5
SLIRP-211ENST00000557623 KCNE1BA0A087WTH5 132 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 CCDC189A1A4V9 331 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 HAT1O14929 419 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 NRP2O60462 931 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 ONECUT2O95948 504 aa11.93□□□□□ -0.5
SLIRP-211ENST00000557623 S100BP04271 92 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms