RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 C8orf82Q6P1X6 216 aaPredicted RBP2.93□□□□□ -1.94
TRAV28-201ENST00000557548 NEK5Q6P3R8 708 aa2.93□□□□□ -1.94
TRAV28-201ENST00000557548 FAM171BQ6P995 826 aa2.93□□□□□ -1.94
TRAV28-201ENST00000557548 CORO6Q6QEF8 472 aa2.93□□□□□ -1.94
TRAV28-201ENST00000557548 MACC1Q6ZN28 852 aa2.93□□□□□ -1.94
TRAV28-201ENST00000557548 IL17RELQ6ZVW7 336 aa2.93□□□□□ -1.94
TRAV28-201ENST00000557548 LONP2Q86WA8 852 aa2.93□□□□□ -1.94
TRAV28-201ENST00000557548 NUDT13Q86X67 352 aa2.93□□□□□ -1.94
TRAV28-201ENST00000557548 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.93□□□□□ -1.94
TRAV28-201ENST00000557548 TMEM185AQ8NFB2 350 aa2.93□□□□□ -1.94
TRAV28-201ENST00000557548 RDM1Q8NG50 284 aa2.93□□□□□ -1.94
TRAV28-201ENST00000557548 SLC26A7Q8TE54 656 aa2.93□□□□□ -1.94
TRAV28-201ENST00000557548 N4BP2L2Q92802 583 aaPredicted RBP2.93□□□□□ -1.94
TRAV28-201ENST00000557548 MRPL38Q96DV4 380 aaKnown RBP2.93□□□□□ -1.94
TRAV28-201ENST00000557548 LINGO1Q96FE5 620 aa2.93□□□□□ -1.94
TRAV28-201ENST00000557548 PGM2Q96G03 612 aa2.93□□□□□ -1.94
TRAV28-201ENST00000557548 CCDC3Q9BQI4 270 aa2.93□□□□□ -1.94
TRAV28-201ENST00000557548 NEURL2Q9BR09 285 aa2.93□□□□□ -1.94
TRAV28-201ENST00000557548 FAM213AQ9BRX8 229 aa2.93□□□□□ -1.94
TRAV28-201ENST00000557548 TRMT61BQ9BVS5 477 aaKnown RBP2.93□□□□□ -1.94
TRAV28-201ENST00000557548 SPRTNQ9H040 489 aaPredicted RBP2.93□□□□□ -1.94
TRAV28-201ENST00000557548 DDX47Q9H0S4 455 aaKnown RBP2.93□□□□□ -1.94
TRAV28-201ENST00000557548 TSPYL1Q9H0U9 437 aa2.93□□□□□ -1.94
TRAV28-201ENST00000557548 MAGEF1Q9HAY2 307 aa2.93□□□□□ -1.94
TRAV28-201ENST00000557548 GPN1Q9HCN4 374 aaPredicted RBP2.93□□□□□ -1.94
TRAV28-201ENST00000557548 A4GALTQ9NPC4 353 aa2.93□□□□□ -1.94
TRAV28-201ENST00000557548 POLE3Q9NRF9 147 aa2.93□□□□□ -1.94
TRAV28-201ENST00000557548 GPR173Q9NS66 373 aa2.93□□□□□ -1.94
TRAV28-201ENST00000557548 OCIAD1Q9NX40 245 aa2.93□□□□□ -1.94
TRAV28-201ENST00000557548 SOHLH2Q9NX45 425 aa2.93□□□□□ -1.94
TRAV28-201ENST00000557548 SMARCAL1Q9NZC9 954 aa2.93□□□□□ -1.94
TRAV28-201ENST00000557548 PTTG2Q9NZH5 202 aa2.93□□□□□ -1.94
TRAV28-201ENST00000557548 NDUFA13Q9P0J0 144 aa2.93□□□□□ -1.94
TRAV28-201ENST00000557548 TRIM10Q9UDY6 481 aa2.93□□□□□ -1.94
TRAV28-201ENST00000557548 KCNN3Q9UGI6 736 aa2.93□□□□□ -1.94
TRAV28-201ENST00000557548 TSPAN16Q9UKR8 245 aa2.93□□□□□ -1.94
TRAV28-201ENST00000557548 EXOC7Q9UPT5 735 aa2.93□□□□□ -1.94
TRAV28-201ENST00000557548 FOXA2Q9Y261 457 aaPredicted RBP2.93□□□□□ -1.94
TRAV28-201ENST00000557548 DLGAP4Q9Y2H0 992 aa2.93□□□□□ -1.94
TRAV28-201ENST00000557548 FAM205AQ6ZU69 1335 aa2.93□□□□□ -1.94
TRAV28-201ENST00000557548 LY6G6EA0A0G2JKS1 128 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 A0A0G2JPF8 293 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 TMEM129A0AVI4 362 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 MAGEB16A2A368 324 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 ANKDD1BA6NHY2 528 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 C17orf105B2RV13 164 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 HNRNPCL3B7ZW38 293 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 ZNF587BE7ETH6 402 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 CCL24O00175 119 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 MAGEB2O15479 319 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 ACSL4O60488 711 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 PEX11AO75192 247 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 ATP6V1G1O75348 118 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 BAG3O95817 575 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 HNRNPCL4P0DMR1 293 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 PSG1P11464 419 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 HLA-DOBP13765 273 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 NCF1P14598 390 aaPredicted RBP2.92□□□□□ -1.94
TRAV28-201ENST00000557548 NR1D1P20393 614 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 DGKAP23743 735 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 ACP1P24666 158 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 DEKP35659 375 aaKnown RBP2.92□□□□□ -1.94
TRAV28-201ENST00000557548 ACAA2P42765 397 aaKnown RBP2.92□□□□□ -1.94
TRAV28-201ENST00000557548 PCYT1AP49585 367 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 VAMP7P51809 220 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 ZNF132P52740 706 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 MLLT10P55197 1068 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 SEC61A1P61619 476 aaKnown RBP2.92□□□□□ -1.94
TRAV28-201ENST00000557548 PRKCEQ02156 737 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 SLC34A1Q06495 639 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 TAF10Q12962 218 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 NFATC4Q14934 902 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 DUOXA1Q1HG43 343 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 ITPRIPL2Q3MIP1 535 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 EPC2Q52LR7 807 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 PXDC1Q5TGL8 231 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 AGAP6Q5VW22 663 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 PRAMEF7Q5VXH5 474 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 OR4A47Q6IF82 309 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 TTC27Q6P3X3 843 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 B3GLCTQ6Y288 498 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 MEX3BQ6ZN04 569 aaKnown RBP2.92□□□□□ -1.94
TRAV28-201ENST00000557548 PIWIL4Q7Z3Z4 852 aaKnown RBP2.92□□□□□ -1.94
TRAV28-201ENST00000557548 LAX1Q8IWV1 398 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 GPALPP1Q8IXQ4 340 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 TBC1D21Q8IYX1 336 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 TDHQ8IZJ6 230 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 KLHDC1Q8N7A1 406 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 RBMXL3Q8N7X1 1067 aaKnown RBP2.92□□□□□ -1.94
TRAV28-201ENST00000557548 NRACQ8N912 160 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 LMNTD1Q8N9Z9 388 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 SMYD1Q8NB12 490 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 ZNF114Q8NC26 417 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 NOA1Q8NC60 698 aaKnown RBP2.92□□□□□ -1.94
TRAV28-201ENST00000557548 OR4A16Q8NH70 328 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 SAP25Q8TEE9 199 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 NTN5Q8WTR8 489 aaPredicted RBP2.92□□□□□ -1.94
TRAV28-201ENST00000557548 CHURC1Q8WUH1 139 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 ASB5Q8WWX0 329 aa2.92□□□□□ -1.94
TRAV28-201ENST00000557548 GGHQ92820 318 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms