RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 ARL15Q9NXU5 204 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 ANKMY1Q9P2S6 941 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 SLC17A6Q9P2U8 582 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 CTNNAL1Q9UBT7 734 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 PILRAQ9UKJ1 303 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 SNX7Q9UNH6 387 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 SRPK3Q9UPE1 567 aa8.02□□□□□ -1.13
PSEN1-209ENST00000553855 TEX51A0A1B0GUA7 166 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 FAM159BA6NKW6 160 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 C21orf140B9A014 251 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 C9J4A7 227 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 GFYI3L273 518 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 K7ENP7 123 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 SMAD7O15105 426 aaKnown RBP8.01□□□□□ -1.13
PSEN1-209ENST00000553855 TP73O15350 636 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 DLGAP3O95886 979 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 SLC16A8O95907 504 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 S100BP04271 92 aaPredicted RBP8.01□□□□□ -1.13
PSEN1-209ENST00000553855 NTRK1P04629 796 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 RHOXF2BP0C7M4 288 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 MSL3P1P0C860 447 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 TPBGLP0DKB5 382 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 PIM1P11309 404 aaPredicted RBP8.01□□□□□ -1.13
PSEN1-209ENST00000553855 TCN2P20062 427 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 HRH2P25021 359 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 DLSTP36957 453 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 GIPRP48546 466 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 ARSFP54793 590 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 CDKN2DP55273 166 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 GRB7Q14451 532 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 GRM7Q14831 915 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 KBTBD12Q3ZCT8 623 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 CCSMST1Q4G0I0 132 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 TAF1BQ53T94 588 aaPredicted RBP8.01□□□□□ -1.13
PSEN1-209ENST00000553855 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.01□□□□□ -1.13
PSEN1-209ENST00000553855 CAPN13Q6MZZ7 669 aaPredicted RBP8.01□□□□□ -1.13
PSEN1-209ENST00000553855 PWWP2BQ6NUJ5 590 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 INO80CQ6PI98 192 aaPredicted RBP8.01□□□□□ -1.13
PSEN1-209ENST00000553855 ZDHHC24Q6UX98 284 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 CYHR1Q6ZMK1 362 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 CDHR3Q6ZTQ4 885 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 TBC1D1Q86TI0 1168 aaPredicted RBP8.01□□□□□ -1.13
PSEN1-209ENST00000553855 VASH2Q86V25 355 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 LMNTD1Q8N9Z9 388 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 STK35Q8TDR2 534 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 RERGQ96A58 199 aaPredicted RBP8.01□□□□□ -1.13
PSEN1-209ENST00000553855 PDLIM5Q96HC4 596 aaKnown RBP8.01□□□□□ -1.13
PSEN1-209ENST00000553855 CATSPER2Q96P56 530 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 RBBP8Q99708 897 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 EGFL8Q99944 293 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 DPH2Q9BQC3 489 aaPredicted RBP8.01□□□□□ -1.13
PSEN1-209ENST00000553855 SELENOSQ9BQE4 189 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 RHOXF2Q9BQY4 288 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 WDR83Q9BRX9 315 aaKnown RBP8.01□□□□□ -1.13
PSEN1-209ENST00000553855 HAUS8Q9BT25 410 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 ACAT2Q9BWD1 397 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 SLC12A9Q9BXP2 914 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 NLNQ9BYT8 704 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 CPNE5Q9HCH3 593 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 LRRC4CQ9HCJ2 640 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 LHX9Q9NQ69 397 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 ZDHHC18Q9NUE0 388 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 EURLQ9NYK6 297 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 TAC3Q9UHF0 121 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 TLK1Q9UKI8 766 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 PSAT1Q9Y617 370 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 ASPMQ8IZT6 3477 aa8.01□□□□□ -1.13
PSEN1-209ENST00000553855 ADARB2-AS1A8MUL3 147 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 TXNDC9O14530 226 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 ZSCAN9O15535 394 aaPredicted RBP8□□□□□ -1.13
PSEN1-209ENST00000553855 ZNF749O43361 778 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 WIPF1O43516 503 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 SRPX2O60687 465 aaPredicted RBP8□□□□□ -1.13
PSEN1-209ENST00000553855 INHBAP08476 426 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 ANXA5P08758 320 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 VSIG8P0DPA2 414 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 ESRRAP11474 423 aaPredicted RBP8□□□□□ -1.13
PSEN1-209ENST00000553855 ZNF37AP17032 561 aaPredicted RBP8□□□□□ -1.13
PSEN1-209ENST00000553855 ALAS2P22557 587 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 CRABP2P29373 138 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 PEBP1P30086 187 aaKnown RBP8□□□□□ -1.13
PSEN1-209ENST00000553855 ADH7P40394 386 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 STAT5AP42229 794 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 GRIA3P42263 894 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 TAS2R39P59534 338 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 GPX6P59796 221 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 RAB10P61026 200 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 ATP6V0D1P61421 351 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 PRDX1Q06830 199 aaKnown RBP8□□□□□ -1.13
PSEN1-209ENST00000553855 TRADDQ15628 312 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 DEFB110Q30KQ9 67 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 FAM214AQ32MH5 1076 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 TEX35Q5T0J7 233 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 LGSNQ5TDP6 509 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 YOD1Q5VVQ6 348 aaPredicted RBP8□□□□□ -1.13
PSEN1-209ENST00000553855 PRAMEF13Q5VWM6 474 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 ICE2Q659A1 982 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 AGTRAPQ6RW13 159 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 SUSD1Q6UWL2 747 aa8□□□□□ -1.13
PSEN1-209ENST00000553855 REC114Q7Z4M0 266 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms